Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol MIR172D
Gene Symbol Synonym OsmiR172d, miR172d, osa-MIR172d osa-miR172d osa-miR172d-3p osa-miR172d-5p, Osa-miR172d
CGSNL Gene Name MICRORNA172D
Gene Name Synonym rice microRNA172d
Protein Name
Allele
Chromosome No. 2
Explanation miRBASE accession: MI0001154. AY551253. LM379357, LM383079.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID -
RAP ID -
Links -
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Dai Z., Wang J., Zhu M., Miao X., Shi Z.
Front Plant Sci 2016  7  1891
OsMADS1 Represses microRNA172 in Elongation of Palea/Lemma Development in Rice.
Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(50)  15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
Lee D.Y., An G.
Plant J. 2012  69(3)  445-61
Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
Jeong D.H., Park S., Zhai J., Gurazada S.G., De Paoli E., Meyers B.C., Green P.J.
Plant Cell 2011  23(12)  4185-207
Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage.
Kozomara,A. and Griffiths-Jones,S.
Nucleic Acids Res. 2011  39  D152-D157
miRBase: integrating microRNA annotation and deep-sequencing data
Zhu QH,Upadhyaya NM,Gubler F,Helliwell CA
BMC Plant Biol 2009  9  149
Over-expression of miR172 causes loss of spikelet determinacy and floral organ abnormalities in rice (Oryza sativa).
Li,Y., Li,W. and Jin,Y.X.
Acta Biochim. Biophys. Sin. (Shanghai) 2005  37 (2)  75-87
Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa
TextPresso Search Search textpresso for MIR172D ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology mRNA cleavage( GO:0006379 )
RNA-induced silencing complex( GO:0016442 )
micro-ribonucleoprotein complex( GO:0035068 )
gene silencing by miRNA( GO:0035195 )
Trait Ontology fertility related trait( TO:0000420 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 22, 2017


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/rice/oryzabase