Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol IDS1
Gene Symbol Synonym OsIDS1, AP2/EREBP#033, AP2/EREBP33, AP2-33/IDS1, AP2-33, AP2-2, DLN104, OsDLN104
CGSNL Gene Name INDETERMINATE SPIKELET 1
Gene Name Synonym OsINDETERMINATE SPIKELET 1, INDETERMINATE SPIKELET1, APETALA2/ethylene-responsive element binding protein 33, APETALA2-2, DLN repressor 104, DLN motif protein 104
Protein Name
Allele osids1, ids1-1
Chromosome No. 3
Explanation AP2-2 in Dai et al. 2016.
Trait Class Tolerance and resistance - Stress tolerance
Reproductive organ - Inflorescence
Reproductive organ - Spikelet, flower, glume, awn
Other
Seed - Morphological traits
Reproductive organ - Heading date
Expression
Sequence/Locus
cDNA Accession No. CT836522
MSU ID LOC_Os03g60430.1
LOC_Os03g60430.2
RAP ID Os03g0818800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Singh P., Mathew I.E., Verma A., Tyagi A.K., Agarwal P.
Int J Mol Sci 2019  20(7) 
Analysis of Rice Proteins with DLN repressor Motif/S.
Yang X., Wang J., Dai Z., Zhao X., Miao X., Shi Z.
Rice (N Y) 2019  12(1)  40
miR156f integrates panicle architecture through genetic modulation of branch number and pedicel length pathways.
Cho L.H., Yoon J., Wai A.H., An G.
Mol. Cells 2018  41(7)  665-675
<i>Histone Deacetylase 701 (HDT701)</i> Induces Flowering in Rice by Modulating Expression of <i>OsIDS1</i>.
Cheng X., Zhang S., Tao W., Zhang X., Liu J., Sun J., Zhang H., Pu L., Huang R., Chen T.
Plant Physiol. 2018  178(2)  824-837
INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice salt tolerance.
Dai Z., Wang J., Zhu M., Miao X., Shi Z.
Front Plant Sci 2016  7  1891
OsMADS1 Represses microRNA172 in Elongation of Palea/Lemma Development in Rice.
Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(50)  15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015  27(5)  1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
Ren D., Li Y., Zhao F., Sang X., Shi J., Wang N., Guo S., Ling Y., Zhang C., Yang Z., He G.
Plant Physiol. 2013  162(2)  872-84
MULTI-FLORET SPIKELET1, which encodes an AP2/ERF protein, determines spikelet meristem fate and sterile lemma identity in rice.
Lee D.Y., An G.
Plant J. 2012  69(3)  445-61
Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012  8  321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
TextPresso Search Search textpresso for IDS1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology negative regulation of transcription, DNA-dependent( GO:0045892 )
response to salt stress( GO:0009651 )
regulation of photoperiodism, flowering( GO:2000028 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
maintenance of floral meristem identity( GO:0010076 )
inflorescence development( GO:0010229 )
flower development( GO:0009908 )
Trait Ontology inflorescence anatomy and morphology trait( TO:0000373 )
lemma length( TO:0000650 )
flower development trait( TO:0000622 )
1000-seed weight( TO:0000382 )
grain size( TO:0000397 )
flowering time( TO:0002616 )
days to heading( TO:0000137 )
salt tolerance( TO:0006001 )
Plant Ontology floral organ meristem development stage( PO:0007601 )
flower development stage( PO:0007615 )
Related Strains
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Phenotype images
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Last updated
Jan 15, 2020


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