Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol IDS1
Gene Symbol Synonym OsIDS1, AP2/EREBP#033, AP2/EREBP33, AP2-33/IDS1, AP2-33, AP2-2
Gene Name Synonym OsINDETERMINATE SPIKELET 1, INDETERMINATE SPIKELET1, APETALA2/ethylene-responsive element binding protein 33, APETALA2-2
Protein Name
Allele osids1, ids1-1
Chromosome No. 3
Explanation LOC_Os03g60430. AP2-2 in Dai et al. 2016.
Trait Class Reproductive organ - Inflorescence
Tolerance and resistance - Stress tolerance
Reproductive organ - Heading date
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits
cDNA Accession No. CT836522
MSU ID LOC_Os03g60430.1
RAP ID Os03g0818800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Cho L.H., Yoon J., Wai A.H., An G.
Mol. Cells 2018  41(7)  665-675
<i>Histone Deacetylase 701 (HDT701)</i> Induces Flowering in Rice by Modulating Expression of <i>OsIDS1</i>.
Cheng X., Zhang S., Tao W., Zhang X., Liu J., Sun J., Zhang H., Pu L., Huang R., Chen T.
Plant Physiol. 2018  178(2)  824-837
INDETERMINATE SPIKELET1 Recruits Histone Deacetylase and a Transcriptional Repression Complex to Regulate Rice salt tolerance.
Dai Z., Wang J., Zhu M., Miao X., Shi Z.
Front Plant Sci 2016  7  1891
OsMADS1 Represses microRNA172 in Elongation of Palea/Lemma Development in Rice.
Wang L., Sun S., Jin J., Fu D., Yang X., Weng X., Xu C., Li X., Xiao J., Zhang Q.
Proc. Natl. Acad. Sci. U.S.A. 2015  112(50)  15504-9
Coordinated regulation of vegetative and reproductive branching in rice.
Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015  27(5)  1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
Lee D.Y., An G.
Plant J. 2012  69(3)  445-61
Two AP2 family genes, SUPERNUMERARY BRACT (SNB) and OsINDETERMINATE SPIKELET 1 (OsIDS1), synergistically control inflorescence architecture and floral meristem establishment in rice.
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012  8  321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
TextPresso Search Search textpresso for IDS1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology negative regulation of transcription, DNA-dependent( GO:0045892 )
response to salt stress( GO:0009651 )
regulation of photoperiodism, flowering( GO:2000028 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
maintenance of floral meristem identity( GO:0010076 )
inflorescence development( GO:0010229 )
flower development( GO:0009908 )
Trait Ontology inflorescence anatomy and morphology trait( TO:0000373 )
lemma length( TO:0000650 )
flower development trait( TO:0000622 )
1000-seed weight( TO:0000382 )
grain size( TO:0000397 )
flowering time( TO:0002616 )
days to heading( TO:0000137 )
salt tolerance( TO:0006001 )
Plant Ontology floral organ meristem development stage( PO:0007601 )
flower development stage( PO:0007615 )
Related Strains
Phenotype images
Last updated
Apr 20, 2019

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