Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | EHD5 |
| Gene Symbol Synonym | OsWD40-161, WD40-161, Ehd5, OsEhd5 |
| CGSNL Gene Name | EARLY HEADING DATE 5 |
| Gene Name Synonym | Early heading date 5 |
| Protein Name | WD-REPEAT PROTEIN 40-161 |
| Allele | ehd5 |
| Chromosome No. | 8 |
| Explanation | PO:0030123: panicle inflorescence. TO:0000975: grain width. |
| Trait Class |
Reproductive organ - Heading date
Reproductive organ - panicle Seed - Morphological traits - Grain shape Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK111820
AK101284 |
| MSU ID |
LOC_Os08g38570.1
|
| RAP ID |
Os08g0493900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Zhang X., Feng Q., Miao J., Zhu J., Zhou C., Fan D., Lu Y., Tian Q., Wang Y., Zhan Q., Wang Z.Q., Wang A., Zhang L., Shangguan Y., Li W., Chen J., Weng Q., Huang T., Tang S., Si L., Huang X., Wang Z.X., Han B.
Plant Cell 2023 The WD40 domain-containing protein Ehd5 positively regulates flowering in rice (Oryza sativa).
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Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012 13(1) 100 Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
circadian rhythm( GO:0007623 )
response to light stimulus( GO:0009416 ) positive regulation of long-day photoperiodism, flowering( GO:0048578 ) positive regulation of short-day photoperiodism, flowering( GO:0048576 ) photoperiodism, flowering( GO:0048573 ) |
| Trait Ontology |
flowering time( TO:0002616 )
days to heading( TO:0000137 ) light sensitivity( TO:0000075 ) yield trait( TO:0000371 ) panicle number( TO:0000152 ) grain yield per plant( TO:0000449 ) seed set percent( TO:0000455 ) 1000-seed weight( TO:0000382 ) panicle length( TO:0000040 ) primary branch number( TO:0000547 ) |
| Plant Ontology |
leaf( PO:0025034 )
floral organ primordium( PO:0025477 ) inflorescence( PO:0009049 ) |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Jan 15, 2024 | |
