Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol WD40-156
Gene Symbol Synonym OsWD40-156
CGSNL Gene Name WD40 PROTEIN 156
Gene Name Synonym
Protein Name WD40 PROTEIN 156
Allele
Chromosome No. 8
Explanation similar to mRNA-associated protein mrnp 41. One of three hub genes in DEGs identified among AG (Anaerobic germination) stress, cold stress and conbined AG and cold stresses (Thapa et al. 2023).
Trait Class Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK111670
MSU ID LOC_Os08g07960.1
LOC_Os08g07960.2
RAP ID Os08g0176800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Thapa R., Tabien R.E., Johnson C.D., Septiningsih E.M.
BMC Genomics 2023  24(1)  185
Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.
Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012  13(1)  100
Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology CUL4 RING ubiquitin ligase complex( GO:0080008 )
response to flooding( GO:0009413 )
response to anoxia( GO:0034059 )
response to cold( GO:0009409 )
response to hypoxia( GO:0001666 )
Trait Ontology cold tolerance( TO:0000303 )
oxygen sensitivity( TO:0000015 )
flooding related trait( TO:0000114 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Oct 2, 2023

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