Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | RACK1B |
| Gene Symbol Synonym | OsWD40-122, WD40-122, OsRACK1B |
| CGSNL Gene Name | RECEPTOR FOR ACTIVATED C KINASE 1B |
| Gene Name Synonym | G-protein beta-subunit-like polypeptide, receptor for activated C kinase 1B |
| Protein Name | RECEPTOR FOR ACTIVATED C KINASE 1B |
| Allele | |
| Chromosome No. | 5 |
| Explanation | CT833917. Q6L4F8. D29704. GO:0071588: hydrogen peroxide mediated signaling pathway. GO:0160030: pollen intine formation. GO:1900055: regulation of leaf senescence. GO:1903647: negative regulation of chlorophyll catabolic process. |
| Trait Class |
Vegetative organ - Leaf
Reproductive organ - panicle Reproductive organ - Pollination, fertilization, fertility - Male sterility Coloration - Chlorophyll Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK065272
AK121567 AK062179 |
| MSU ID |
LOC_Os05g47890.1
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| RAP ID |
Os05g0552300 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Rahman M.A., Ullah H.
Plants (Basel) 2023 12(12) Receptor for Activated C Kinase1B (RACK1B) Delays Salinity-Induced Senescence in Rice Leaves by Regulating Chlorophyll Degradation.
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Rahman M.A., Fennell H., Ullah H.
Int J Mol Sci 2022 23(15) Receptor for Activated C Kinase1B (OsRACK1B) Impairs Fertility in Rice through NADPH-Dependent H2O2 Signaling Pathway.
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Zhang D., Chen L., Li D., Lv B., Chen Y., Chen J., XuejiaoYan, Liang J.
PLoS ONE 2014 9(5) e97120 OsRACK1 is involved in abscisic acid- and H2O2-mediated signaling to regulate seed germination in rice (Oryza sativa, L.).
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Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012 13(1) 100 Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
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Nakashima A,Chen L,Thao NP,Fujiwara M,Wong HL,Kuwano M,Umemura K,Shirasu K,Kawasaki T,Shimamoto K
Plant Cell 2008 20 2265-79 RACK1 functions in rice innate immunity by interacting with the Rac1 immune complex.
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Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997 14(1) 71-75 Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
cytosolic ribosome( GO:0022626 )
chloroplast( GO:0009507 ) nucleolus( GO:0005730 ) signal transducer activity( GO:0004871 ) shoot development( GO:0048367 ) root development( GO:0048364 ) response to cadmium ion( GO:0046686 ) anther development( GO:0048653 ) pollen wall assembly( GO:0010208 ) pollen exine formation( GO:0010584 ) anther dehiscence( GO:0009901 ) inflorescence development( GO:0010229 ) positive regulation of hydrogen peroxide biosynthetic process( GO:0010729 ) pollen development( GO:0009555 ) response to salt stress( GO:0009651 ) leaf senescence( GO:0010150 ) regulation of chlorophyll catabolic process( GO:0010271 ) |
| Trait Ontology |
pollen fertility( TO:0000421 )
inflorescence development trait( TO:0000621 ) spikelet anatomy and morphology trait( TO:0000657 ) spikelet sterility( TO:0000436 ) hydrogen peroxide content( TO:0000605 ) anther shape( TO:0000214 ) glume opening( TO:0000474 ) salt tolerance( TO:0006001 ) leaf senescence( TO:0000249 ) relative chlorophyll content( TO:0001016 ) leaf yellowing tolerance( TO:0002664 ) |
| Plant Ontology |
pollen development stage( PO:0001007 )
inflorescence development stage( PO:0001083 ) G anther dehiscence stage( PO:0001035 ) anther development stage( PO:0001004 ) 4 leaf senescence stage( PO:0001054 ) |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Sep 13, 2023 | |
