Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | WD40-86 |
| Gene Symbol Synonym | OsWD40-86, OsWDR5a, WDR5a, OsWDR5, WDR5, OsDWD41, DWD41 |
| CGSNL Gene Name | WD40 PROTEIN 86 |
| Gene Name Synonym | WD repeat domain 5, DWD motif- containing protein 41 |
| Protein Name | WD40 PROTEIN 86 |
| Allele | |
| Chromosome No. | 3 |
| Explanation | a WD40 protein related to Arabidopsis WDR5. Rice, a model SD plant, contains two major flowering pathways: a conserved photoperiod pathway and a unique photoperiod-independent flowering-time pathway. OsWDR5a might not be involved in the photoperiod pathway (Jiang et al. 2018). chromatin-modifying complex. histone modification protein. |
| Trait Class |
Reproductive organ - Heading date
Reproductive organ - Panicle, Mode of branching Character as QTL - Yield and productivity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK105499
AK112085 AK111860 |
| MSU ID |
LOC_Os03g51550.1
LOC_Os03g51550.2 LOC_Os03g51550.3 |
| RAP ID |
Os03g0725400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Wang Y., Cao L., Liu M., Yan P., Niu F., Dong S., Ma F., Lan D., Zhang X., Hu J., Xin X., Yang J., Luo X.
Plant J. 2024 119(4) 1751-1766 Alternative splicing of lncRNA LAIR fine-tunes the regulation of neighboring yield-related gene LRK1 expression in rice.
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Wang R., You X., Zhang C., Fang H., Wang M., Zhang F., Kang H., Xu X., Liu Z., Wang J., Zhao Q., Wang X., Hao Z., He F., Tao H., Wang D., Wang J., Fang L., Qin M., Zhao T., Zhang P., Xing H., Xiao Y., Liu W., Xie Q., Wang G.L., Ning Y.
Genome Biol. 2022 23(1) 154 An ORFeome of rice E3 ubiquitin ligases for global analysis of the ubiquitination interactome.
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Jiang P., Wang S., Jiang H., Cheng B., Wu K., Ding Y.
Plant Physiol. 2018 176(4) 2761-2771 The COMPASS-Like Complex Promotes Flowering and Panicle Branching in Rice.
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Wang Y., Luo X., Sun F., Hu J., Zha X., Su W., Yang J.
Nat Commun 2018 9(1) 3516 Overexpressing lncRNA LAIR increases grain yield and regulates neighbouring gene cluster expression in rice.
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Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012 13(1) 100 Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
regulation of gene expression, epigenetic( GO:0040029 )
Set1C/COMPASS complex( GO:0048188 ) nucleus( GO:0005634 ) vegetative to reproductive phase transition( GO:0010228 ) embryonic development( GO:0009790 ) inflorescence development( GO:0010229 ) histone binding( GO:0042393 ) histone H3-K4 methylation( GO:0051568 ) |
| Trait Ontology |
days to heading( TO:0000137 )
panicle size( TO:0006032 ) secondary branch number( TO:0000557 ) grain number( TO:0002759 ) inflorescence development trait( TO:0000621 ) |
| Plant Ontology |
inflorescence development stage( PO:0001083 )
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| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Mar 6, 2026 | |
