Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | SEH1 |
| Gene Symbol Synonym | OsWD40-19, WD40-19, OsSEH1 |
| CGSNL Gene Name | OsSEC13 HOMOLOG 1 |
| Gene Name Synonym | nucleoporin SEH1, WD40 protein 19 |
| Protein Name | OsSEC13 HOMOLOG 1 |
| Allele | osseh1, osseh1-1, osseh1-2, OsSEH1MSD, OsSEH1BCS |
| Chromosome No. | 1 |
| Explanation | highly similar to Arabidopsis thaliana (Seh1). GO:0035859: Seh1-associated complex. GO:1904263: positive regulation of TORC1 signaling. GO:1902884: positive regulation of response to oxidative stress. |
| Trait Class |
Tolerance and resistance - Stress tolerance
|
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK070122
|
| MSU ID |
LOC_Os01g43250.1
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| RAP ID |
Os01g0620100 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Gu S., Zhang Z., Li J., Sun J., Cui Z., Li F., Zhuang J., Chen W., Su C., Wu L., Wang X., Guo Z., Xu H., Zhao M., Ma D., Chen W.
Plant Physiol. 2023 Natural variation in OsSEC13 HOMOLOG 1 modulates redox homeostasis to confer cold tolerance in rice.
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Gu S., Zhuang J., Zhang Z., Chen W., Xu H., Zhao M., Ma D.
Front Plant Sci 2022 13 1110724 Multi-omics approach reveals the contribution of <i>OsSEH1</i> to rice cold tolerance.
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Song J., Li J., Sun J., Hu T., Wu A., Liu S., Wang W., Ma D., Zhao M.
Front Plant Sci 2018 9 875 Genome-Wide Association Mapping for cold tolerance in a Core Collection of Rice (<i>Oryza sativa</i> L.) Landraces by Using High-Density Single Nucleotide Polymorphism Markers From Specific-Locus Amplified Fragment Sequencing.
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Ouyang Y., Huang X., Lu Z., Yao J.
BMC Genomics 2012 13(1) 100 Genomic survey, expression profile and co-expression network analysis of OsWD40 family in rice.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
response to cold( GO:0009409 )
response to salt stress( GO:0009651 ) response to water deprivation( GO:0009414 ) response to osmotic stress( GO:0006970 ) protein transport( GO:0015031 ) cellular response to amino acid starvation( GO:0034198 ) structural molecule activity( GO:0005198 ) Nup107-160 complex( GO:0031080 ) response to oxidative stress( GO:0006979 ) abscisic acid metabolic process( GO:0009687 ) abscisic acid mediated signaling( GO:0009738 ) response to abscisic acid stimulus( GO:0009737 ) regulation of flavonoid biosynthetic process( GO:0009962 ) phenylpropanoid biosynthetic process( GO:0009699 ) cell redox homeostasis( GO:0045454 ) nucleus( GO:0005634 ) cytoplasm( GO:0005737 ) |
| Trait Ontology |
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 ) osmotic response sensitivity( TO:0000095 ) drought tolerance( TO:0000276 ) abscisic acid sensitivity( TO:0000615 ) abscisic acid content( TO:0002667 ) flavonoid content( TO:0000290 ) relative plant height( TO:0001034 ) relative root length( TO:0000516 ) total soluble sugar content( TO:0000340 ) hydrogen peroxide content( TO:0000605 ) oxidative stress( TO:0002657 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 24, 2025 | |
