Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | LFS |
| Gene Symbol Synonym | AP2/EREBP#109, AP2/EREBP109, OsAP2/EREBP109, OsLFS |
| CGSNL Gene Name | LATE FLOWERING SEMI-DWARF |
| Gene Name Synonym | APETALA2/ethylene-responsive element binding protein 109 |
| Protein Name | APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 109 |
| Allele | lfs, lfs-1, lfs-2 |
| Chromosome No. | 8 |
| Explanation | HQ858820. AP2-EREBP transcription factor. |
| Trait Class |
Vegetative organ - Culm
Reproductive organ - Heading date Reproductive organ - panicle Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity Character as QTL - Plant growth activity |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK106769
|
| MSU ID |
LOC_Os08g34360.1
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| RAP ID |
Os08g0442400 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
|
Shim Y., Lim C., Seong G., Choi Y., Kang K., Paek N.C.
Plant Cell Environ. 2022 45(8) 2446-2459 The AP2/ERF transcription factor LATE FLOWERING SEMI-DWARF suppresses long-day-dependent repression of flowering.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355 AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Yilmaz,A., Nishiyama,M.Y. Jr., Fuentes,B.G., Souza,G.M., Janies,D., Gray,J. and Grotewold,E.
Plant Physiol. 2009 149(1) 171-180 GRASSIUS: a platform for comparative regulatory genomics across the grasses
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
gibberellic acid mediated signaling( GO:0009740 )
regulation of long-day photoperiodism, flowering( GO:0048586 ) circadian rhythm( GO:0007623 ) negative regulation of seed germination( GO:0010187 ) response to abscisic acid stimulus( GO:0009737 ) response to salt stress( GO:0009651 ) response to water deprivation( GO:0009414 ) DNA binding( GO:0003677 ) transcription factor activity( GO:0003700 ) nucleus( GO:0005634 ) transcription, DNA-dependent( GO:0006351 ) regulation of growth( GO:0040008 ) |
| Trait Ontology |
flowering time( TO:0002616 )
days to heading( TO:0000137 ) plant height( TO:0000207 ) panicle length( TO:0000040 ) 1000-seed weight( TO:0000382 ) gibberellic acid content( TO:0002675 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Nov 18, 2022 | |
