Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol NDL1
Gene Symbol Synonym ERF79, OsERF#079, OsERF079, OsERF79, AP2/EREBP#017, AP2/EREBP17, OsNDL1, DSP, OsDSP
CGSNL Gene Name NARROW AND DWARF LEAF 1
Gene Name Synonym ethylene response factor 79, APETALA2/ethylene-responsive element binding protein 17, defective stigma and panicle
Protein Name ETHYLENE RESPONSE FACTOR 79
Allele dsp, dsp cr2-1, dsp cr2-2, dsp cr2-5, dsp cr2-8, dsp cr2-15-3, dsp cr2-15, dsp cr3
Chromosome No. 2
Explanation the Ortholog of Arabidopsis ENHANCER OF SHOOT REGENERATION1 (ESR1)/DORNROSCHEN (DRN). GO:0062210: shoot regeneration. GO:0090506: axillary shoot meristem initiation. PO:0030123: panicle inflorescence. TO:0000784: inflorescence branch morphology trait. GO:2000012: regulation of auxin polar transport.
Trait Class Vegetative organ - Shoot apical meristem(SAM)
Vegetative organ - Leaf
Vegetative organ - Culm
Reproductive organ - Inflorescence
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Spikelet, flower, glume, awn
Other
Expression
Sequence/Locus
cDNA Accession No. -
MSU ID LOC_Os02g38090.1
RAP ID Os02g0594300
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yu L., Yao M., Mao L., Ma T., Nie Y., Ma H., Shao K., An H., Zhao J.
Plant Biotechnol. J. 2023   
Rice DSP controls stigma, panicle and tiller primordium initiation.
Kusnandar A.S., Itoh J.I., Sato Y., Honda E., Hibara K.I., Kyozuka J., Naramoto S.
Plant Cell Physiol. 2022  63(2)  265-278
NARROW AND DWARF LEAF 1, the Ortholog of Arabidopsis ENHANCER OF SHOOT REGENERATION1/DORNRÖSCHEN, Mediates Leaf Development and Maintenance of the shoot apical meristem in Oryza sativa L.
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012  8  321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
Nakano T, Suzuki K, Fujimura T, Shinshi H.
Plant Physiol. 2006  140(2)  411-32
Genome-wide analysis of the ERF gene family in Arabidopsis and rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription, DNA-dependent( GO:0006351 )
DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
auxin mediated signaling pathway( GO:0009734 )
cell proliferation( GO:0008283 )
maintenance of shoot apical meristem identity( GO:0010492 )
leaf development( GO:0048366 )
auxin polar transport( GO:0009926 )
response to auxin stimulus( GO:0009733 )
positive regulation of transcription, DNA-dependent( GO:0045893 )
secondary shoot formation( GO:0010223 )
floral organ development( GO:0048437 )
inflorescence development( GO:0010229 )
stigma development( GO:0048480 )
Trait Ontology leaf development trait( TO:0000655 )
shoot apical meristem development( TO:0006020 )
inflorescence development trait( TO:0000621 )
floral organ development trait( TO:0006022 )
tiller number( TO:0000346 )
tillering ability( TO:0000329 )
inflorescence branching( TO:0000050 )
floral organ number( TO:0006038 )
spikelet number( TO:0000456 )
meristem tissue development trait( TO:0006016 )
auxin sensitivity( TO:0000163 )
seed set percent( TO:0000455 )
female sterility( TO:0000358 )
pedicel length( TO:0000630 )
Plant Ontology stigma( PO:0009073 )
plant ovary( PO:0009072 )
anther( PO:0009066 )
spikelet meristem( PO:0006327 )
portion of meristem tissue( PO:0009013 )
shoot apical meristem( PO:0020148 )
floral organ primordium( PO:0025477 )
primordium( PO:0025127 )
inflorescence( PO:0009049 )
inflorescence development stage( PO:0001083 )
vascular leaf primordium( PO:0000017 )
leaf development stage( PO:0001050 )
Related Strains
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Phenotype images
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Last updated
Jan 11, 2024

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