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Basic Information
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CGSNL Gene Symbol
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IAA31
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Gene Symbol Synonym
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OsIAA3, IAA3, OsIAA31, OsIAA30, IAA30
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CGSNL Gene Name
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AUX/IAA PROTEIN 31
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Gene Name Synonym
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Aux/IAA protein 3, Aux/IAA protein 31, Auxin-responsive protein IAA31
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Protein Name
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AUX/IAA PROTEIN 31
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Allele
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Osiaa3, iaa3, iaa3-1, iaa3-2, OsIAA3-KO, OsIAA3-KO1, OsIAA3-KO2
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Chromosome No.
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12
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Explanation
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P0C133. OsIAA3 in Mao et al. 2020, Gao et al. 2023. OsIAA30 in Li et al. 2022.
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Trait Class
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Vegetative organ - Root
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK073361
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MSU ID
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LOC_Os12g40900.1
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RAP ID
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Os12g0601400
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Gao J., Zhao Y., Zhao Z., Liu W., Jiang C., Li J., Zhang Z., Zhang H., Zhang Y., Wang X., Sun X., Li Z.
New Phytol. 2023 238(3) 1146-1162
RRS1 shapes robust root system to enhance drought resistance in rice.
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Han Y., Zhang C., Sha H., Wang X., Yu Y., Liu J., Zhao G., Wang J., Qiu G., Xu X., Fang J.
Rice (N Y) 2023 16(1) 9
Ubiquitin-conjugating enzyme OsUBC11 Affects the Development of Roots via Auxin Pathway.
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Li P., Jiang J., Zhang G., Miao S., Lu J., Qian Y., Zhao X., Wang W., Qiu X., Zhang F., Xu J.
Front Plant Sci 2022 13 1102938
Integrating GWAS and transcriptomics to identify candidate genes conferring heat tolerance in rice.
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Kawai T., Akahoshi R., Shelley I.J., Kojima T., Sato M., Tsuji H., Inukai Y.
Front Plant Sci 2022 13 834378
Auxin Distribution in Lateral Root Primordium Development Affects the Size and Lateral Root Diameter of Rice.
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Mohanty B.
Front Genet 2021 12 639654
Promoter Architecture and Transcriptional Regulation of Genes Upregulated in Germination and Coleoptile Elongation of Diverse Rice Genotypes Tolerant to Submergence.
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Mao C., He J., Liu L., Deng Q., Yao X., Liu C., Qiao Y., Li P., Ming F.
Plant Biotechnol. J. 2020 18(2) 429-442
OsNAC2 integrates auxin and cytokinin pathways to modulate rice root development.
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Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019 31(6) 1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
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Zhang H., Tan X., Li L., He Y., Hong G., Li J., Lin L., Cheng Y., Yan F., Chen J., Sun Z.
Mol. Plant Pathol. 2019 20(8) 1093-1104
Suppression of auxin signalling promotes rice susceptibility to Rice black streaked dwarf virus infection.
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Cui P., Liu H., Ruan S., Ali B., Gill R.A., Ma H., Zheng Z., Zhou W.
J Integr Plant Biol 2017
A zinc finger protein, interacted with cyclophilin, affects root development via IAA pathway in rice.
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Zhao Y., Cheng S., Song Y., Huang Y., Zhou S., Liu X., Zhou D.X.
Plant Cell 2015
The Interaction between Rice ERF3 and WOX11 Promotes crown root Development by Regulating Gene Expression Involved in Cytokinin Signaling.
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Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
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Zhou Y., Liu L., Huang W., Yuan M., Zhou F., Li X., Lin Y.
PLoS ONE 2014 9(4) e94210
Overexpression of OsSWEET5 in Rice Causes Growth Retardation and Precocious Senescence.
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Zheng H., Li S., Ren B., Zhang J., Ichii M., Taketa S., Tao Y., Zuo J., Wang H.
Mol Plant 2013 6(5) 1719-21
LATERAL ROOTLESS2, a Cyclophilin Protein, Regulates Lateral Root Initiation and Auxin Signaling Pathway in Rice.
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Zhu Z.X., Liu Y., Liu S.J., Mao C.Z., Wu Y.R., Wu P.
Mol Plant 2011 5(1) 154-61
A Gain-of-Function Mutation in OsIAA11 Affects lateral root Development in Rice.
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Song Y., Wang L., Xiong L.
Planta 2009 229(3) 577-91
Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments.
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Nakamura A,Umemura I,Gomi K,Hasegawa Y,Kitano H,Sazuka T,Matsuoka M
Plant J. 2006 46 297-306
Production and characterization of auxin-insensitive rice by overexpression of a mutagenized rice IAA protein.
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Jain M,Kaur N,Garg R,Thakur JK,Tyagi AK,Khurana JP
Funct Integr Genomics 2006 6 47-59
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa).
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to heat( GO:0009408 )
response to deep water( GO:0030912 )
nucleus( GO:0005634 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription, DNA-dependent( GO:0006351 )
response to auxin stimulus( GO:0009733 )
auxin mediated signaling pathway( GO:0009734 )
defense response to virus( GO:0051607 )
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Trait Ontology
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auxin sensitivity( TO:0000163 )
auxin content( TO:0002672 )
black streak dwarf virus resistance( TO:0000020 )
submergence tolerance( TO:0000524 )
heat tolerance( TO:0000259 )
root length( TO:0000227 )
lateral root length( TO:0001012 )
lateral root number( TO:0001013 )
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Plant Ontology
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-
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Related Strains
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Phenotype images
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Last updated
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Feb 15, 2025
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Update info.