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Detail of Gene

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Basic Information
CGSNL Gene Symbol IAA11
Gene Symbol Synonym OsIAA11
CGSNL Gene Name _
Gene Name Synonym Aux/IAA protein 11
Protein Name
Allele Osiaa11
Chromosome No. 3
Explanation Q75GK0. BAF12627. rice homolog of Arabidopsis AtIAA14. GO:1990110: callus formation.
Trait Class Vegetative organ - Root
Tolerance and resistance
Tolerance and resistance - Stress tolerance
cDNA Accession No. -
MSU ID LOC_Os03g43400.1
RAP ID Os03g0633500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019  31(6)  1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
Acevedo L.A., Kwon J., Nicholson L.K.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(7)  2589-2594
Quantification of reaction cycle parameters for an essential molecular switch in an auxin-responsive transcription circuit in rice.
He Q., Yang L., Hu W., Zhang J., Xing Y.
Sci Rep 2018  8(1)  14051
Overexpression of an auxin receptor OsAFB6 significantly enhanced grain yield by increasing cytokinin and decreasing auxin concentrations in rice panicle.
Zhang N., Yu H., Yu H., Cai Y., Huang L., Xu C., Xiong G., Meng X., Wang J., Chen H., Liu G., Jing Y., Yuan Y., Liang Y., Li S., Smith S.M., Li J., Wang Y.
Plant Cell 2018  30(7)  1461-1475
A Core Regulatory Pathway Controlling Rice tiller angle Mediated by the <i>LAZY1</i>-Dependent Asymmetric Distribution of Auxin.
Guo F., Zhang H., Liu W., Hu X., Han N., Qian Q., Xu L., Bian H.
Plant Cell Physiol. 2018   
Callus initiation from root explants employs different strategies in rice and Arabidopsis.
Cui P., Liu H., Ruan S., Ali B., Gill R.A., Ma H., Zheng Z., Zhou W.
J Integr Plant Biol 2017   
A zinc finger protein, interacted with cyclophilin, affects root development via IAA pathway in rice.
Jing H., Yang X., Zhang J., Liu X., Zheng H., Dong G., Nian J., Feng J., Xia B., Qian Q., Li J., Zuo J.
Nat Commun 2015  6  7395
Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling.
Liu Y.a, Donner E.b, Lombi E.b, Li R.c, Wu Z.a, Zhao F.J.d e, Wu P.a
Plant Soil 2013  372  125-136
Assessing the contributions of lateral roots to element uptake in rice using an auxin-related lateral root mutant
Kang B., Zhang Z., Wang L., Zheng L., Mao W., Li M., Wu Y., Wu P., Mo X.
Plant J. 2013  74(1)  86-97
OsCYP2, a chaperone involved in degradation of auxin-responsive proteins, plays crucial roles in rice lateral root initiation.
Coudert Y., Bès M., Le T.V., Pré M., Guiderdoni E., Gantet P.
BMC Genomics 2011  12  387
Transcript profiling of crown rootless1 mutant stem base reveals new elements associated with crown root development in rice.
Zhu Z.X., Liu Y., Liu S.J., Mao C.Z., Wu Y.R., Wu P.
Mol Plant 2011  5(1)  154-61
A Gain-of-Function Mutation in OsIAA11 Affects lateral root Development in Rice.
Song Y., Wang L., Xiong L.
Planta 2009  229(3)  577-91
Comprehensive expression profiling analysis of OsIAA gene family in developmental processes and in response to phytohormone and stress treatments.
Jain M,Kaur N,Garg R,Thakur JK,Tyagi AK,Khurana JP
Funct Integr Genomics 2006  6  47-59
Structure and expression analysis of early auxin-responsive Aux/IAA gene family in rice (Oryza sativa).
TextPresso Search Search textpresso for IAA11 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology gravitropism( GO:0009630 )
response to auxin stimulus( GO:0009733 )
auxin mediated signaling pathway( GO:0009734 )
response to jasmonic acid stimulus( GO:0009753 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
regulation of transcription, DNA-dependent( GO:0006355 )
response to water deprivation( GO:0009414 )
response to wounding( GO:0009611 )
lateral root morphogenesis( GO:0010102 )
cell fate specification( GO:0001708 )
response to gravity( GO:0009629 )
Trait Ontology auxin sensitivity( TO:0000163 )
phosphorus uptake( TO:0000511 )
callus induction( TO:0000428 )
gravity response trait( TO:0002693 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Feb 19, 2020