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Basic Information
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CGSNL Gene Symbol
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PLT6
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Gene Symbol Synonym
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OsPLT6, AP2/EREBP#118, AP2/EREBP118, BBM1, OsBBM1, OsBBML1, BBML1, OsASGR-BBML1, ASGR-BBML1
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CGSNL Gene Name
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PLETHORA 6
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Gene Name Synonym
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Plethora 6, APETALA2/ethylene-responsive element binding protein 118, BABY BOOM1, BABY BOOM 1, Apospory-specific Genome Region-BABY-BOOM LIKE 1, BABY-BOOM LIKE 1
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Protein Name
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PLETHORA 6
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Allele
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bbm1, Osbbm1
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Chromosome No.
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11
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Explanation
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NCBI BioProject ID PRJNA1253340: Transcriptome analyses for rice zygotes produced by in vitro fertilization. the rice ortholog of PsASGR-BBML1. a gene in rice zygotes with paternal allele-dependent expression. GO:1990110: callus formation. GO:1902275: regulation of chromatin organization.
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Trait Class
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Seed - Morphological traits - Embryo
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK287621
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MSU ID
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LOC_Os11g19060.1
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RAP ID
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Os11g0295900
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Masuo S.N., Akter N., Koshimizu S., Rattanawong K., Kitta T., Taki Y., Kinoshita A., Satoh A., Takasaki H., Ikeda M., Oshima Y., Mitsuda N., Ohme-Takagi M., Yano K., Okamoto T.
iScience 2025 28(10) 113621
<i>Oryza sativa</i> Baby Boom1 converts the developmental fate of rice egg cells from gametic into somatic status.
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Akter N., Tezuka T., Rattanawong K., Satoh A., Kinoshita A., Sato Y., Okamoto T.
Plant J. 2025 122(6) e70305
Role of paternal Oryza sativa Baby Booms (OsBBMs) in initiating de novo gene expression and regulating early zygotic development in rice.
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Dan J., Xia Y., Wang Y., Zhan Y., Tian J., Tang N., Deng H., Cao M.
Plant Cell Rep. 2024 43(3) 79
One-line hybrid rice with high-efficiency synthetic apomixis and near-normal fertility.
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Khanday I., Santos-Medellín C., Sundaresan V.
New Phytol. 2023 238(2) 673-687
Somatic embryo initiation by rice BABY BOOM1 involves activation of zygote-expressed auxin biosynthesis genes.
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Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023 6(1) 457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
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Wu X., Xie L., Sun X., Wang N., Finnegan E.J., Helliwell C., Yao J., Zhang H., Wu X., Hands P., Lu F., Ma L., Zhou B., Chaudhury A., Cao X., Luo M.
Nat Plants 2023
Mutation in Polycomb repressive complex 2 gene OsFIE2 promotes asexual embryo formation in rice.
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Chahal L.S., Conner J.A., Ozias-Akins P.
Front Plant Sci 2022 13 863908
Phylogenetically Distant <i>BABY BOOM</i> Genes From <i>Setaria italica</i> Induce Parthenogenesis in Rice.
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Deushi R., Toda E., Koshimizu S., Yano K., Okamoto T.
Plants (Basel) 2021 10(2)
Effect of Paternal Genome Excess on the Developmental and Gene Expression Profiles of Polyspermic Zygotes in Rice.
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Rahman M.H., Toda E., Kobayashi M., Kudo T., Koshimizu S., Takahara M., Iwami M., Watanabe Y., Sekimoto H., Yano K., Okamoto T.
Plant Cell Physiol. 2019 60(4) 725-737
Expression of Genes from Paternal Alleles in Rice Zygotes and Involvement of OsASGR-BBML1 in Initiation of Zygotic Development.
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Khanday I., Skinner D., Yang B., Mercier R., Sundaresan V.
Nature 2019 565(7737) 91-95
A male-expressed rice embryogenic trigger redirected for asexual propagation through seeds.
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Anderson S.N., Johnson C.S., Chesnut J., Jones D.S., Khanday I., Woodhouse M., Li C., Conrad L.J., Russell S.D., Sundaresan V.
Dev. Cell 2017 43(3) 349-358.e4
The Zygotic Transition Is Initiated in Unicellular Plant Zygotes with Asymmetric Activation of Parental Genomes.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Li P., Xue H.
Acta Biochim. Biophys. Sin. (Shanghai) 2011 43(9) 688-97
Structural characterization and expression pattern analysis of the rice PLT gene family.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
somatic embryogenesis( GO:0010262 )
fertilization( GO:0009566 )
embryonic development( GO:0009790 )
positive regulation of nuclear division( GO:0051785 )
positive regulation of cell division( GO:0051781 )
asexual reproduction( GO:0019954 )
regulation of microtubule-based process( GO:0032886 )
regulation of cell cycle( GO:0051726 )
chromatin organization( GO:0006325 )
regulation of chromosome organization( GO:0033044 )
positive regulation of auxin biosynthetic process( GO:0010601 )
auxin mediated signaling pathway( GO:0009734 )
response to auxin stimulus( GO:0009733 )
cell fate determination( GO:0001709 )
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Trait Ontology
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seed viability( TO:0000345 )
callus induction( TO:0000428 )
auxin sensitivity( TO:0000163 )
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Plant Ontology
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plant sperm cell( PO:0000084 )
plant zygote( PO:0000423 )
plant zygote stage( PO:0001097 )
plant embryo stage( PO:0007631 )
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Related Strains
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Phenotype images
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Last updated
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Dec 23, 2025
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Update info.