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Basic Information
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CGSNL Gene Symbol
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PLT3
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Gene Symbol Synonym
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OsPLT3, AP2/EREBP#018, AP2/EREBP18, BBM2, OsBBM2, OsPLT2, PLT2
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CGSNL Gene Name
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PLETHORA 3
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Gene Name Synonym
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Plethora 3, APETALA2/ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN 18, BABY BOOM2, BABY BOOM 2
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Protein Name
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PLETHORA 3
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Allele
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bbm2, Osbbm2
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Chromosome No.
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2
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Explanation
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NCBI BioProject ID PRJNA1253340: Transcriptome analyses for rice zygotes produced by in vitro fertilization. OsPLT2 in Anderson et al. 2017. GO:1902275: regulation of chromatin organization.
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Trait Class
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Seed - Morphological traits - Embryo
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK112070
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MSU ID
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LOC_Os02g40070.1
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RAP ID
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Os02g0614300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Akter N., Tezuka T., Rattanawong K., Satoh A., Kinoshita A., Sato Y., Okamoto T.
Plant J. 2025 122(6) e70305
Role of paternal Oryza sativa Baby Booms (OsBBMs) in initiating de novo gene expression and regulating early zygotic development in rice.
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Khanday I., Santos-Medellín C., Sundaresan V.
New Phytol. 2023 238(2) 673-687
Somatic embryo initiation by rice BABY BOOM1 involves activation of zygote-expressed auxin biosynthesis genes.
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Chahal L.S., Conner J.A., Ozias-Akins P.
Front Plant Sci 2022 13 863908
Phylogenetically Distant <i>BABY BOOM</i> Genes From <i>Setaria italica</i> Induce Parthenogenesis in Rice.
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Rahman M.H., Toda E., Kobayashi M., Kudo T., Koshimizu S., Takahara M., Iwami M., Watanabe Y., Sekimoto H., Yano K., Okamoto T.
Plant Cell Physiol. 2019 60(4) 725-737
Expression of Genes from Paternal Alleles in Rice Zygotes and Involvement of OsASGR-BBML1 in Initiation of Zygotic Development.
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Khanday I., Skinner D., Yang B., Mercier R., Sundaresan V.
Nature 2019 565(7737) 91-95
A male-expressed rice embryogenic trigger redirected for asexual propagation through seeds.
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Anderson S.N., Johnson C.S., Chesnut J., Jones D.S., Khanday I., Woodhouse M., Li C., Conrad L.J., Russell S.D., Sundaresan V.
Dev. Cell 2017 43(3) 349-358.e4
The Zygotic Transition Is Initiated in Unicellular Plant Zygotes with Asymmetric Activation of Parental Genomes.
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Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012 8 321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
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Li P., Xue H.
Acta Biochim. Biophys. Sin. (Shanghai) 2011 43(9) 688-97
Structural characterization and expression pattern analysis of the rice PLT gene family.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
embryonic development( GO:0009790 )
somatic embryogenesis( GO:0010262 )
positive regulation of cell division( GO:0051781 )
regulation of cell cycle( GO:0051726 )
chromatin organization( GO:0006325 )
regulation of chromosome organization( GO:0033044 )
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Trait Ontology
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seed viability( TO:0000345 )
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Plant Ontology
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plant zygote( PO:0000423 )
plant zygote stage( PO:0001097 )
plant embryo stage( PO:0007631 )
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Related Strains
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Phenotype images
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Last updated
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Oct 10, 2025
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Update info.