Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol PLT1
Gene Symbol Synonym OsPLT1, AP2/EREBP#044, AP2/EREBP44, AINTEGUMENTA, OsAINTEGUMENTA
CGSNL Gene Name PLETHORA 1
Gene Name Synonym Plethora 1, APETALA2/ethylene-responsive element binding protein 44
Protein Name PLETHORA 1
Allele
Chromosome No. 4
Explanation GO:1990110: callus formation.
Trait Class Other
Expression
Sequence/Locus
cDNA Accession No. AK111891
MSU ID LOC_Os04g55970.1
LOC_Os04g55970.2
RAP ID Os04g0653600
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Guo F., Wang H., Lian G., Cai G., Liu W., Zhang H., Li D., Zhou C., Han N., Zhu M., Su Y., Seo P.J., Xu L., Bian H.
Commun Biol 2023  6(1)  457
Initiation of scutellum-derived callus is regulated by an embryo-like developmental pathway in rice.
Nakamura A., Hirota Y., Shigihara M., Watanabe M., Sato A., Tsuji H., Shimada Y.
Biosci. Biotechnol. Biochem. 2023   
Molecular and cellular insights into auxin-regulated primary root growth: a comparative study of Arabidopsis and rice.
Butt H., Bazin J., Alshareef S., Eid A., Benhamed M., Reddy A.S.N., Crespi M., Mahfouz M.M.
Commun Biol 2021  4(1)  529
Overlapping roles of spliceosomal components SF3B1 and PHF5A in rice splicing regulation.
Rashid M., Guangyuan H., Guangxiao Y., Hussain J., Xu Y.
Evol. Bioinform. Online 2012  8  321-355
AP2/ERF Transcription Factor in Rice: Genome-Wide Canvas and Syntenic Relationships between Monocots and Eudicots.
Li P., Xue H.
Acta Biochim. Biophys. Sin. (Shanghai) 2011  43(9)  688-97
Structural characterization and expression pattern analysis of the rice PLT gene family.
DB Reference
Gramene ID -
Ontologies
Gene Ontology DNA binding( GO:0003677 )
transcription factor activity( GO:0003700 )
nucleus( GO:0005634 )
transcription, DNA-dependent( GO:0006351 )
Trait Ontology callus induction( TO:0000428 )
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Feb 23, 2025

/rice/oryzabase