Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | PGIP6 |
| Gene Symbol Synonym | Ospgip6, pgip6, OsPGIP6 |
| CGSNL Gene Name | POLYGALACTURONASE-INHIBITING PROTEIN 6 |
| Gene Name Synonym | Polygalacturonase-inhibiting protein 6, polygalacturonase inhibiting protein 6 |
| Protein Name | POLYGALACTURONASE-INHIBITING PROTEIN 6 |
| Allele | |
| Chromosome No. | 8 |
| Explanation | leucine-rich repeat (LRR) protein, inhibitor of fungal polygalacturonase. putative DNA-damage- repair/toleration protein. |
| Trait Class |
Biochemical character
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK120908
AK120866 AK060670 |
| MSU ID |
LOC_Os08g39550.1
|
| RAP ID |
Os08g0505900 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
- |
| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Thapa R., Tabien R.E., Johnson C.D., Septiningsih E.M.
BMC Genomics 2023 24(1) 185 Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress.
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Yin M., Wang R., Li S., Luo M., Wei W., Wang M., Jiang J., Lin Y., Zhao Y.
Front Plant Sci 2022 13 970716 High <i>Sclerotinia sclerotiorum</i> resistance in rapeseed plant has been achieved by <i>OsPGIP6</i>.
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Wu T., Peng C., Li B., Wu W., Kong L., Li F., Chu Z., Liu F., Ding X.
Rice (N Y) 2019 12(1) 90 OsPGIP1-Mediated Resistance to Bacterial Leaf Streak in Rice is Beyond Responsive to the Polygalacturonase of Xanthomonas oryzae pv. oryzicola.
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Lu L., Zhou F., Zhou Y., Fan X., Ye S., Wang L., Chen H., Lin Y.
Plant Cell Rep. 2012 31(7) 1173-87. Expression profile analysis of the polygalacturonase-inhibiting protein genes in rice and their responses to phytohormones and fungal infection.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
defense response( GO:0006952 )
defense response to fungus( GO:0050832 ) defense response to bacterium( GO:0042742 ) response to molecule of fungal origin( GO:0002238 ) response to cold( GO:0009409 ) |
| Trait Ontology |
bacterial leaf streak disease resistance( TO:0000203 )
fungal disease resistance( TO:0000439 ) cold tolerance( TO:0000303 ) |
| Plant Ontology | - |
| Related Strains | |
| - | |
| Phenotype images | |
| - | |
| Last updated | |
| Oct 2, 2023 | |
