Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol SH1
Gene Symbol Synonym YAB2, OsYAB2, OsSh1, Sh1, OsFIL2, OsSH1, Osh1
CGSNL Gene Name SHATTERING1
Gene Name Synonym YABBY2, YABBY 2, OsYABBY2, Os YABBY2, Shattering1, Shattering 1, FIL homolog 2
Protein Name PROTEIN YABBY 2
Allele
Chromosome No. 3
Explanation Q10FZ7. AB274014. AF098753. homolog of sorghum SH1. YAB family TF gene. a shattering-related YABBY transcription factor.
Trait Class Seed - Physiological traits - Shattering
Other
Expression
Sequence/Locus
cDNA Accession No. AK070258
MSU ID LOC_Os03g44710.1
LOC_Os03g44710.2
LOC_Os03g44710.3
RAP ID Os03g0650000
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Zhang T., Wu A., Hu X., Deng Q., Ma Z., Su L.
PeerJ 2023  11  e14783
Comprehensive study of rice YABBY gene family: evolution, expression and interacting proteins analysis.
Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020  101(6)  1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
Li Y., Yang Y., Liu Y., Li D., Zhao Y., Li Z., Liu Y., Jiang D., Li J., Zhou H., Chen J., Zhuang C., Liu Z.
Rice (N Y) 2019  12(1)  60
Overexpression of OsAGO1b Induces Adaxially Rolled Leaves by Affecting Leaf Abaxial Sclerenchymatous Cell Development in Rice.
Liu X., Li M., Liu K., Tang D., Sun M., Li Y., Shen Y., Du G., Cheng Z.
J. Exp. Bot. 2016  67(8)  2139-50
Semi-Rolled Leaf2 modulates rice leaf rolling by regulating abaxial side cell differentiation.
Li Y.Y., Shen A., Xiong W., Sun Q.L., Luo Q., Song T., Li Z.L., Luan W.J.
Rice (N Y) 2016  9(1)  46
Overexpression of OsHox32 Results in Pleiotropic Effects on Plant Type Architecture and Leaf Development in Rice.
Wang M., Yu Y., Haberer G., Marri P.R., Fan C., Goicoechea J.L., Zuccolo A., Song X., Kudrna D., Ammiraju J.S., Cossu R.M., Maldonado C., Chen J., Lee S., Sisneros N., de Baynast K., Golser W., Wissotski M., Kim W., Sanchez P., Ndjiondjop M.N., Sanni K., Long M., Carney J., Panaud O., Wicker T., Machado C.A., Chen M., Mayer K.F., Rounsley S., Wing R.A.
Nat. Genet. 2014  46(9)  982-8
The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication.
Purugganan M.D.
Nat. Genet. 2014  46(9)  931-2
An evolutionary genomic tale of two rice species.
Nakano T., Ito Y.
Plant Biotechnology 2013  30  209-216
Molecular mechanisms controlling plant organ abscission
Lin Z., Li X., Shannon L.M., Yeh C.T., Wang M.L., Bai G., Peng Z., Li J., Trick H.N., Clemente T.E., Doebley J., Schnable P.S., Tuinstra M.R., Tesso T.T., White F., Yu J.
Nat. Genet. 2012  44(6)  720-4
Parallel domestication of the Shattering1 genes in cereals.
Olsen K.M.
Nat. Genet. 2012  44(6)  616-7
One gene's shattering effects.
Zhou, Dao-Xiu
Plant Physiol. 2007  144(1)  380-390
A WUSCHEL-LIKE HOMEOBOX Gene Represses a YABBY Gene Expression Required for Rice Leaf Development.
Toriba,T., Harada,K., Takamura,A., Nakamura,H., Ichikawa,H., Suzaki,T. and Hirano,H.
Molecular Genetics & Genomics (Molecular General Genetics up to 2001) 2007  277  457-468
Molecular characterization the YABBY gene family in Oryza sativa and expression analysis of OsYABBY1.
Jang S, Hur J, Kim SJ, Han MJ, Kim SR, An G.
Plant Mol. Biol. 2004  56(1)  133-143
Ectopic expression of OsYAB1 causes extra stamens and carpels in rice.
Sawa,S., Watanabe,K., Goto,K., Liu,Y.G., Shibata,D., Kanaya,E., Morita,E.H. and Okada,K.
Genes Dev. 1999  13(9)  1079-1088
FILAMENTOUS FLOWER, a meristem and organ identity gene of Arabidopsis, encodes a protein with a zinc finger and HMG-related domains.
DB Reference
Gramene ID -
Ontologies
Gene Ontology nucleus( GO:0005634 )
metal ion binding( GO:0046872 )
Trait Ontology -
Plant Ontology lemma( PO:0009037 )
palea( PO:0009038 )
Related Strains
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Phenotype images
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Last updated
Jun 21, 2023

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