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Basic Information
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CGSNL Gene Symbol
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COL4
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Gene Symbol Synonym
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OsCOL4, OsD, OsBBX5, OsCOL4/OsD, OsCCT06, BBX5, CCT06
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CGSNL Gene Name
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CONSTANS-LIKE GENE 4
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Gene Name Synonym
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CONSTANS-like gene 4, B-box-containing protein 5, CCT domain-containing gene 6, CCT (CO, CO-LIKE and TOC1) domain protein 6, CCT domain protein 6, OsCO like2
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Protein Name
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CONSTANS-LIKE PROTEIN 4
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Allele
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oscol4
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Chromosome No.
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2
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Explanation
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MT435799 - MT435928. CO-like protein containing two B-box zinc finger domains and one CCT domain. floral repressor. OsCO like2 in Li et al. 2023.
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Trait Class
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Reproductive organ - Heading date
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK058536
AK100097
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MSU ID
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LOC_Os02g39710.1
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RAP ID
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Os02g0610500
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Cui S., Song P., Wang C., Chen S., Hao B., Xu Z., Cai L., Chen X., Zhu S., Gan X., Dong H., Hu Y., Zhou L., Hou H., Tian Y., Liu X., Chen L., Liu S., Jiang L., Wang H., Jia G., Zhou S., Wan J.
Mol Plant 2024 17(6) 935-954
The RNA binding protein EHD6 recruits the m6A reader YTH07 and sequesters OsCOL4 mRNA into phase-separated ribonucleoprotein condensates to promote rice flowering.
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Li J., Qiu J.X., Zeng Q.H., Yi Zhuang, Zhang N., Xu S.X., Jin J., Dong Z.C., Chen L., Huang W.
Cell Rep 2023 42(7) 112765
OsTOC1 plays dual roles in the regulation of plant circadian clock by functioning as a direct transcription activator or repressor.
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Zhang J., Fan X., Hu Y., Zhou X., He Q., Liang L., Xing Y.
J Integr Plant Biol 2020
Global analysis of CCT family knockout mutants identifies four genes involved in regulating heading date in rice.
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Cui Y., Wang J., Feng L., Liu S., Li J., Qiao W., Song Y., Zhang Z., Cheng Y., Zhang L., Zheng X., Yang Q.
Front Plant Sci 2020 11 864
A Combination of Long-Day Suppressor Genes Contributes to the Northward Expansion of Rice.
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Shalmani A., Jing X.Q., Shi Y., Muhammad I., Zhou M.R., Wei X.Y., Chen Q.Q., Li W.Q., Liu W.T., Chen K.M.
BMC Genomics 2019 20(1) 27
Characterization of B-BOX gene family and their expression profiles under hormonal, abiotic and metal stresses in Poaceae plants.
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Sheng P., Wu F., Tan J., Zhang H., Ma W., Chen L., Wang J., Wang J., Zhu S., Guo X., Wang J., Zhang X., Cheng Z., Bao Y., Wu C., Liu X., Wan J.
Plant Mol. Biol. 2016 92(1-2) 209-22
A CONSTANS-like transcriptional activator, OsCOL13, functions as a negative regulator of flowering downstream of OsphyB and upstream of Ehd1 in rice.
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Zhang L., Li Q., Dong H., He Q., Liang L., Tan C., Han Z., Yao W., Li G., Zhao H., Xie W., Xing Y.
Sci Rep 2015 5 7663
Three CCT domain-containing genes were identified to regulate heading date by candidate gene-based association mapping and transformation in rice.
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Wang J., Hu J., Qian Q., Xue H.W.
Mol Plant 2013 6(2) 514-27
LC2 and OsVIL2 promote rice flowering by photoperoid-induced epigenetic silencing of OsLF.
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Cockram J., Thiel T., Steuernagel B., Stein N., Taudien S., Paul C Bailey, Donal M O'Sullivan
PLoS ONE 2012 7(9) e45307
Genome dynamics explain the evolution of flowering time CCT domain gene families in the Poaceae.
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Lee Y.-S., Jeong D.-H., Lee D.-Y., Yi J., Ryu C.-H., Kim S.L., Jeong H.J., Choi S.C., Jin P., Yang J., Cho L.-H., Choi H., An G.
Plant Journal 2010 63(1) 18-30
OsCOL4 is a constitutive flowering repressor upstream of Ehd1 and downstream of OsphyB.
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Griffiths S., Roy P Dunford, Coupland G., David A Laurie
Plant Physiol. 2003 131(4) 1855-67
The evolution of CONSTANS-like gene families in barley, rice, and Arabidopsis.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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negative regulation of long-day photoperiodism, flowering( GO:0048579 )
negative regulation of short-day photoperiodism, flowering( GO:0048577 )
circadian rhythm( GO:0007623 )
intracellular( GO:0005622 )
zinc ion binding( GO:0008270 )
photoperiodism, flowering( GO:0048573 )
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Trait Ontology
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days to heading( TO:0000137 )
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Plant Ontology
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seed( PO:0009010 )
shoot system( PO:0009006 )
leaf( PO:0025034 )
flowering stage( PO:0007616 )
inflorescence( PO:0009049 )
anther( PO:0009066 )
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Related Strains
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Phenotype images
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Last updated
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Oct 4, 2024
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Update info.