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Basic Information
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CGSNL Gene Symbol
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TDC1
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Gene Symbol Synonym
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OsTDC, TDC, TDC2, OsTDC1, OsTDC4
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CGSNL Gene Name
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TRYPTOPHAN DECARBOXYLASE 1
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Gene Name Synonym
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Trp decarboxylase 1, tryptophan decarboxylase
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Protein Name
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TRYPTOPHAN DECARBOXYLASE 1
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Allele
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Chromosome No.
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8
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Explanation
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Q6ZJK7. PDB ID: 6KHO, 6KHP and 6KHN. Senescence-induced serotonin biosynthesis. Aromatic L-amino acid decarboxylase (AADC) (E.C.4.1.1.28) TDC2 in Liu et al. 2015. OsTDC4 in Bhowal et al. 2021. GO:0036469: L-tryptophan decarboxylase activity.
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Trait Class
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Biochemical character
Tolerance and resistance - Stress tolerance
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK069031
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MSU ID
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LOC_Os08g04540.1
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RAP ID
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Os08g0140300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang H.W., Shi X.Z., Zhong X.Y., Ai G., Wang Y.H., Zhou Z.Z., Lu D., Liu X.L., Chen Z.J.
Plant Genome 2025 18(1) e20547
Identification, characterization, and expression of Oryza sativa Tryptophan decarboxylase genes associated with fluroxypyr-meptyl metabolism.
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Hwang O.J., Back K.
Antioxidants (Basel) 2022 11(5)
Molecular Regulation of Antioxidant Melatonin Biosynthesis by Brassinosteroid Acting as an Endogenous Elicitor of Melatonin Induction in Rice Seedlings.
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Sun Y., Wang B., Ren J., Zhou Y., Han Y., Niu S., Zhang Y., Shi Y., Zhou J., Yang C., Ma X., Liu X., Luo Y., Jin C., Luo J.
Int J Mol Sci 2022 23(6)
OsbZIP18, a Positive Regulator of Serotonin Biosynthesis, Negatively Controls the UV-B Tolerance in Rice.
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Bhowal B., Bhattacharjee A., Goswami K., Sanan-Mishra N., Singla-Pareek SL., Kaur C., Sopory S.
Int J Mol Sci 2021 22(20)
Serotonin and Melatonin Biosynthesis in Plants: Genome-Wide Identification of the Genes and Their Expression Reveal a Conserved Role in Stress and Development.
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Li R., Jiang M., Song Y., Zhang H.
Front Plant Sci 2021 12 727596
Melatonin Alleviates Low-Temperature Stress <i>via</i> ABI5-Mediated Signals During Seed Germination in Rice (<i>Oryza sativa</i> L.).
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Zhou Y., Liao L., Liu X., Liu B., Chen X., Guo Y., Huang C., Zhao Y., Zeng Z.
Journal of Advanced Research 2020 24 501-511
Crystal structure of <i>Oryza sativa</i> TDC reveals the substrate specificity for TDC-mediated melatonin biosynthesis.
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Hong Y., Zhang Y., Sinumporn S., Yu N., Zhan X., Shen X., Chen D., Yu P., Wu W., Liu Q., Cao Z., Zhao C., Cheng S., Cao L.
Plant J. 2018
Premature leaf senescence 3, encoding a methyltransferase, is required for melatonin biosynthesis in rice.
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Yang Q.Q., Zhao D.S., Zhang C.Q., Wu H.Y., Li Q.F., Gu M.H., Sun S.S., Liu Q.Q.
Plant Physiol. 2018 176(3) 1965-1980
A Connection between Lysine and Serotonin Metabolism in Rice Endosperm.
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Mao C., Lu S., Lv B., Zhang B., Shen J., He J., Luo L., Xi D., Chen X., Ming F.
Plant Physiol. 2017 174(3) 1747-1763
A Rice NAC Transcription Factor Promotes leaf senescence via ABA Biosynthesis.
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Jin B., Zhou X., Jiang B., Gu Z., Zhang P., Qian Q., Chen X., Ma B.
Rice (N Y) 2015 8 18
Transcriptome profiling of the spl5 mutant reveals that spl5 has a negative role in the biosynthesis of serotonin for rice disease resistance.
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Liu X., Zhou S., Wang W., Ye Y., Zhao Y., Xu Q., Zhou C., Tan F., Cheng S., Zhou D.X.
Plant Cell 2015 27(5) 1428-44
Regulation of histone methylation and reprogramming of gene expression in the rice inflorescence meristem.
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Abu-Zaitoon YM.
Appl. Biochem. Biotechnol. 2014 172(5) 2480-95
Phylogenetic analysis of putative genes involved in the tryptophan-dependent pathway of auxin biosynthesis in rice.
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Park H.L., Lee S.W., Jung K.H., Hahn T.R., Cho M.H.
Phytochemistry 2013 96 57-71
Transcriptomic analysis of UV-treated rice leaves reveals UV-induced phytoalexin biosynthetic pathways and their regulatory networks in rice.
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Dubouzet J.G., Matsuda F., Ishihara A., Miyagawa H., Wakasa K.
Plant Biotechnol. J. 2013
Production of indole alkaloids by metabolic engineering of the tryptophan pathway in rice.
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Abu-Zaitoon YM., Bennett K., Normanly J., Nonhebel H.M.
Physiol Plant 2012 146(4) 487-99
A large increase in IAA during development of rice grains correlates with the expression of tryptophan aminotransferase OsTAR1 and a grain-specific YUCCA.
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Kang K,Kim YS,Park S,Back K
Plant Physiol. 2009 150 1380-93
Senescence-induced serotonin biosynthesis and its role in delaying senescence in rice leaves.
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Kang S., Kang K., Lee K., Back K.
Planta 2007 227(1) 263-72
Characterization of rice tryptophan decarboxylases and their direct involvement in serotonin biosynthesis in transgenic rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to herbicide( GO:0009635 )
melatonin biosynthetic process( GO:0030187 )
response to brassinosteroid stimulus( GO:0009741 )
response to UV-B( GO:0010224 )
response to biotic stimulus( GO:0009607 )
response to jasmonic acid stimulus( GO:0009753 )
response to auxin stimulus( GO:0009733 )
response to gibberellin stimulus( GO:0009739 )
response to cytokinin stimulus( GO:0009735 )
response to ethylene stimulus( GO:0009723 )
response to abscisic acid stimulus( GO:0009737 )
response to water deprivation( GO:0009414 )
response to heat( GO:0009408 )
response to salt stress( GO:0009651 )
circadian rhythm( GO:0007623 )
response to hormone stimulus( GO:0009725 )
response to cold( GO:0009409 )
cytoplasm( GO:0005737 )
serotonin biosynthetic process from tryptophan( GO:0006587 )
cellular amino acid metabolic process( GO:0006520 )
carboxy-lyase activity( GO:0016831 )
pyridoxal phosphate binding( GO:0030170 )
response to UV( GO:0009411 )
auxin biosynthetic process( GO:0009851 )
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Trait Ontology
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UV light sensitivity( TO:0000160 )
cold tolerance( TO:0000303 )
plant growth hormone sensitivity( TO:0000401 )
heat tolerance( TO:0000259 )
drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
biotic stress trait( TO:0000179 )
abscisic acid sensitivity( TO:0000615 )
ethylene sensitivity( TO:0000173 )
cytokinin sensitivity( TO:0000167 )
gibberellic acid sensitivity( TO:0000166 )
auxin sensitivity( TO:0000163 )
jasmonic acid sensitivity( TO:0000172 )
UV-B light sensitivity( TO:0000601 )
brassinosteroid sensitivity( TO:0002677 )
herbicide sensitivity( TO:0000058 )
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Plant Ontology
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whole plant fruit ripening stage( PO:0007010 )
root( PO:0009005 )
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Related Strains
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Phenotype images
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Last updated
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Sep 4, 2025
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Update info.