|
Basic Information
|
|
CGSNL Gene Symbol
|
GRF6
|
|
Gene Symbol Synonym
|
OsGRF6
|
|
CGSNL Gene Name
|
GROWTH-REGULATING FACTOR 6
|
|
Gene Name Synonym
|
growth-regulating factor6, GROWTH REGULATING FACTOR 6
|
|
Protein Name
|
GROWTH-REGULATING FACTOR 6
|
|
Allele
|
grf6, osgrf6, KO-OsGRF6-1, KO-OsGRF6-2
|
|
Chromosome No.
|
3
|
|
Explanation
|
BK004861. AJ575243. (GRF6) is one of the targets of miR396 (Li et al. 2010). OsmiR396d target gene (Tang et al. 2018) TO:0000816: inflorescence bract anatomy and morphology trait. GO:1900150: regulation of defense response to fungus.
|
|
Trait Class
|
Biochemical character
Vegetative organ - Culm
Seed
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Other
|
|
Expression
|
|
|
Sequence/Locus
|
|
cDNA Accession No.
|
AK073578
|
|
MSU ID
|
LOC_Os03g51970.1
|
|
RAP ID
|
Os03g0729500
|
|
Links
|
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
|
INSD Accession List
(Test version)
|
-
|
|
Map
|
|
Locate(cM)
|
|
|
Link map
|
Classical linkage map
|
|
References
|
|
Yuan H., Cheng M., Fan F., Zheng X., Wang R., Si F., Luo X., Li N., Li S.
Adv Sci (Weinh) 2024 e2407733
OsGRF6-OsYUCCA1/OsWRKY82 Signaling Cascade Upgrade Grain Yield and Bacterial Blight Resistance in Rice.
|
|
Mo Y., Li G., Liu L., Zhang Y., Li J., Yang M., Chen S., Lin Q., Fu G., Zheng D., Ling Y.
Front Plant Sci 2023 14 1121852
<i>OsGRF4AA</i> compromises heat tolerance of developing pollen grains in rice.
|
|
Zhou J., Zhang R., Jia X., Tang X., Guo Y., Yang H., Zheng X., Qian Q., Qi Y., Zhang Y.
Plant Biotechnol. J. 2022 20(2) 310-322
CRISPR-Cas9 mediated OsMIR168a knockout reveals its pleiotropy in rice.
|
|
Yang X., Zhao X., Dai Z., Ma F., Miao X., Shi Z.
Plant Physiol. 2021
OsmiR396/Growth Regulating Factor modulate rice grain size.through direct regulation of embryo-specific miR408.
|
|
Lu Y., Feng Z., Meng Y., Bian L., Xie H., Mysore K.S., Liang J.
Plant Physiol. 2020 182(4) 2213-2227
SLENDER RICE1 and <i>Oryza sativa</i> INDETERMINATE DOMAIN2 Regulating OsmiR396 Are Involved in stem elongation.
|
|
Dai Z., Tan J., Zhou C., Yang X., Yang F., Zhang S., Sun S., Miao X., Shi Z.
Plant Biotechnol. J. 2019
The OsmiR396-OsGRF8-OsF3H-flavonoid pathway mediates resistance to the brown planthopper in rice (Oryza sativa).
|
|
Chandran V., Wang H., Gao F., Cao X.L., Chen Y.P., Li G.B., Zhu Y., Yang X.M., Zhang L.L., Zhao Z.X., Zhao J.H., Wang Y.G., Li S., Fan J., Li Y., Zhao J.Q., Li S.Q., Wang W.M.
Front Plant Sci 2018 9 1999
MiR396-<i>OsGRF</i>s Module Balances Growth and Rice blast disease-Resistance.
|
|
Tang Y., Liu H., Guo S., Wang B., Li Z., Chong K., Xu Y.
Plant Physiol. 2018 176(1) 946-959
OsmiR396d Affects Gibberellin and Brassinosteroid Signaling to Regulate Plant Architecture in Rice.
|
|
Liu H., Guo S., Xu Y., Li C., Zhang Z., Zhang D., Xu S., Zhang C., Chong K.
Plant Physiol. 2014 165(1) 160-74
OsmiR396d-regulated OsGRFs Function in Floral Organogenesis in Rice through Binding to their Targets OsJMJ706 and OsCR4.
|
|
Yong-Fang Li, Zheng Y., Charles Addo-Quaye, Zhang L., Saini A., Jagadeeswaran G., Michael J Axtell, Zhang W., Sunkar R.
Plant J. 2010 62(5) 742-59
Transcriptome-wide identification of microRNA targets in rice.
|
|
Choi, D., J.H. Kim and H. Kende
Plant Cell Physiol. 2004 45 (7) 897-904
Whole genome analysis of the OsGRF gene family encoding plant-specific putative transcription activators in rice (Oryza sativa L.).
|
|
Ye,R., Yao,Q.H., Xu,Z.H. and Xue,H.W.
Plant J. 2004 38(2) 348-357
Development of an efficient method for the isolation of factors involved in gene transcription during rice embryo development.
|
|
DB Reference
|
|
Gramene ID
|
-
|
|
Ontologies
|
|
Gene Ontology
|
transcription activator activity( GO:0016563 )
response to gibberellin stimulus( GO:0009739 )
regulation of gibberellic acid mediated signaling( GO:0009937 )
defense response to fungus( GO:0050832 )
regulation of unidimensional cell growth( GO:0051510 )
regulation of gibberellin biosynthetic process( GO:0010371 )
response to heat( GO:0009408 )
defense response to bacterium( GO:0042742 )
inflorescence development( GO:0010229 )
|
|
Trait Ontology
|
floral organ development trait( TO:0006022 )
sterile lemma length( TO:0000240 )
embryo development trait( TO:0000620 )
seed development trait( TO:0000653 )
gibberellic acid sensitivity( TO:0000166 )
plant height( TO:0000207 )
gibberellic acid content( TO:0002675 )
blast disease( TO:0000074 )
grain yield( TO:0000396 )
heat tolerance( TO:0000259 )
bacterial blight disease resistance( TO:0000175 )
secondary branch number( TO:0000557 )
inflorescence development trait( TO:0000621 )
hydrogen peroxide content( TO:0000605 )
filled grain number( TO:0000447 )
grain yield per plant( TO:0000449 )
|
|
Plant Ontology
|
plant embryo( PO:0009009 )
root tip( PO:0000025 )
shoot apex( PO:0000037 )
|
|
Related Strains
|
|
-
|
|
Phenotype images
|
|
-
|
|
Last updated
|
|
Jan 24, 2025
|
Update info.