Update info.Gene - Detail
Detail of Gene
| Basic Information | |
|---|---|
| CGSNL Gene Symbol | GRP162 |
| Gene Symbol Synonym | OsGRP162, RRM1-212, OsRRM1-212 |
| CGSNL Gene Name | GLYCINE-RICH RNA-BINDING PROTEIN 162 |
| Gene Name Synonym | Glycine-Rich Protein GRP162, a Gly-rich protein encoding 162 amino acids, glycine-rich protein 162, RNA recognition motif domain protein 1-212 |
| Protein Name | GLYCINE-RICH RNA-BINDING PROTEIN 162 |
| Allele | grp162-1, grp162-2 |
| Chromosome No. | 12 |
| Explanation | a partner protein of RF5. AK289192. D22643, D15398. Embryonic abundant protein, glycine-rich. Glycine-rich RNA-binding protein. a subunit of the restoration of fertility complex (RFC). Gene Expression Omnibus (GEO) under accession number GSE222671. |
| Trait Class |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration
Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK243636
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| MSU ID |
LOC_Os12g43600.1
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| RAP ID |
Os12g0632000 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
|
INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Yang C., Luo A., Lu H.P., Davis S.J., Liu J.X.
Science Bulletin 2024 69(1) 59-71 Diurnal regulation of alternative splicing associated with thermotolerance in rice by two glycine-rich RNA-binding proteins.
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Jiang X., Yu S., Huang Y., Huang J., Liu S., Yang D., Fu J., He H., Fu H.
PeerJ 2024 12 e17668 Identification of the <i>RRM1</i> gene family in rice (<i>Oryza sativa</i>) and its response to rice blast.
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Qin X., Huang Q., Xiao H., Zhang Q., Ni C., Xu Y., Liu G., Yang D., Zhu Y., Hu J.
New Phytol. 2016 210(3) 934-45 The rice DUF1620-containing and WD40-like repeat protein is required for the assembly of the restoration of fertility complex.
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Hu J., Huang W., Huang Q., Qin X., Dan Z., Yao G., Zhu R., Zhu Y.
New Phytol. 2013 199(1) 52-8 The mechanism of ORFH79 suppression with the artificial restorer fertility gene Mt-GRP162.
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Hu J., Wang K., Huang W., Liu G., Gao Y., Wang J., Huang Q., Ji Y., Qin X., Wan L., Zhu R., Li S., Yang D., Zhu Y.
Plant Cell 2012 24(1) 109-22 The rice pentatricopeptide repeat protein Rf5 restores fertility in Hong-Lian cytoplasmic male-sterile lines via a complex with the glycine-rich protein GRP162.
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Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994 6(4) 615-624 Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
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| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
nucleus( GO:0005634 )
response to heat( GO:0009408 ) DNA duplex unwinding( GO:0032508 ) RNA secondary structure unwinding( GO:0010501 ) circadian rhythm( GO:0007623 ) innate immune response( GO:0045087 ) nucleotide binding( GO:0000166 ) mRNA export from nucleus( GO:0006406 ) single-stranded DNA binding( GO:0003697 ) regulation of stomatal movement( GO:0010119 ) response to abscisic acid stimulus( GO:0009737 ) response to cadmium ion( GO:0046686 ) response to cold( GO:0009409 ) response to salt stress( GO:0009651 ) response to zinc ion( GO:0010043 ) vegetative to reproductive phase transition( GO:0010228 ) cell wall( GO:0005618 ) chloroplast( GO:0009507 ) nucleolus( GO:0005730 ) peroxisome( GO:0005777 ) plasma membrane( GO:0005886 ) double-stranded DNA binding( GO:0003690 ) |
| Trait Ontology |
fertility restoration trait( TO:0000497 )
heat tolerance( TO:0000259 ) relative plant height( TO:0001034 ) relative total dry weight( TO:0000633 ) relative root length( TO:0000516 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Jan 14, 2025 | |
