Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym Lox2:Os:1, OsLOX9, LOX9, OsLOX8, LOX8, OsLOX2, LOX2, OsRLL, OsHI-LOX, HI-LOX, RLL2 LOX, RLL2, Lox2osPil, OsLOX2;1, LOX2;1, OsLOX1, OsLOX7, LOX7, CM-LOX1, OsCM-LOX1
CGSNL Gene Name _
Gene Name Synonym lipoxygenase Lox2:Os:1, lipoxygenase 9, lipoxygenase 8, herbivore-induced type 2 13-lipoxygenase, RLL2 lipoxygenase
Protein Name _
Allele
Chromosome No. 8
Explanation D14000. P38419. FJ607153. FJ660631 (japonica, OsLOX8), FJ660634 (indica, OsLOX9), AP008214 (25233664-25243037). BAA03102. OsLOX8 and OsLOX9 in Marla and Singh 2012. OsLOX2;1 in Kobayashi et al. 2016, Aung et al. 2018, Dong et al. 2021. OsLOX1 in Liu et al. 2019, Zhang et al. 2021, Kong et al. 2021, Zhang et al. 2022. LOX9 in Hu et al. 2021, Ma et al. 2020, Wang et al. 2021, Li et al. 2024. OsLOX7 in Wang et al. 2023. LOX2 in An et al. 2022, Tan et al. 2022. GO:1900366: negative regulation of defense response to insect. GO:0098542: defense response to other organism.
Trait Class Biochemical character
Tolerance and resistance
Tolerance and resistance - Disease resistance
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Grain quality
Expression
Sequence/Locus
cDNA Accession No. AK241395
MSU ID LOC_Os08g39840.1
RAP ID Os08g0508800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Lu M., He Q., Wang G., Fan Q., Yan W., Gu K., Yang Z., Du J., Xie K., Li L., Zhang H., Chen J., Sun Z., Li Y.
Plant Biotechnol. J. 2025  23(10)  4602-4617
JA-responsive R2R3-type MYB transcription factor osmyb4p confers broad-spectrum antiviral immunity in rice.
Zhang H., Guo D., Lei Y., Lozano-Torres JL., Deng Y., Xu J., Hu L.
New Phytol. 2024   
Cover crop rotation suppresses root-knot nematode infection by shaping soil microbiota.
Li Y., Miao Y., Yuan H., Huang F., Sun M., He L., Liu X., Luo J.
Mol Plant 2024  17(12)  1866-1882
Volatilome-based GWAS identifies OsWRKY19 and OsNAC021 as key regulators of rice aroma.
Li H., Xu L., Wu W., Peng W., Lou Y., Lu J.
Biology (Basel) 2023  12(6) 
Infestation by the Piercing-Sucking Herbivore <i>Nilaparvata lugens</i> Systemically Triggers JA- and SA-Dependent Defense Responses in Rice.
Wang X., Cheng R., Xu D., Huang R., Li H., Jin L., Wu Y., Tang J., Sun C., Peng D., Chu C., Guo X.
Nat Commun 2023  14(1)  3354
MG1 interacts with a protease inhibitor and confers resistance to rice root-knot nematode.
Islam M.R., Chowdhury R., Roy A.S., Islam M.N., Mita M.M., Bashar S., Saha P., Rahat R.A., Hasan M., Akter M.A., Alam M.Z., Latif M.A.
Plants (Basel) 2023  12(9) 
Native <i>Trichoderma</i> Induced the Defense-Related Enzymes and Genes in Rice against <i>Xanthomonas oryzae</i> pv. <i>oryzae</i> (<i>Xoo</i>).
Tan X., Zhang H., Yang Z., Wei Z., Li Y., Chen J., Sun Z.
PLoS Pathog. 2022  18(5)  e1010548
NF-YA transcription factors suppress jasmonic acid-mediated antiviral defense and facilitate viral infection in rice.
Zhang H., Zheng D., Song F., Jiang M.
Front Plant Sci 2022  13  840360
Expression Patterns and Functional Analysis of 11 E3 Ubiquitin Ligase Genes in Rice.
An L., Zhang S., Guo P., Song L., Xie C., Guo H., Fang R., Jia Y.
Mol. Plant Pathol. 2022  23(1)  92-103
RIR1 represses plant immunity by interacting with mitochondrial complex I subunit in rice.
Zhang H., Zheng D., Yin L., Song F., Jiang M.
Front Plant Sci 2021  12  652453
Functional Analysis of <i>OsMED16</i> and <i>OsMED25</i> in Response to Biotic and Abiotic Stresses in Rice.
Kong Y., Wang G., Chen X., Li L., Zhang X., Chen S., He Y., Hong G.
Plant Cell Environ. 2021   
OsPHR2 modulates phosphate starvation-induced OsMYC2 signalling and resistance to Xanthomonas oryzae pv. oryzae.
Wang L., Cao S., Wang P., Lu K., Song Q., Zhao F.J., Chen Z.J.
Proc. Natl. Acad. Sci. U.S.A. 2021  118(13) 
DNA hypomethylation in tetraploid rice potentiates stress-responsive gene expression for salt tolerance.
Hu B., Zhou Y., Zhou Z., Sun B., Zhou F., Yin C., Ma W., Chen H., Lin Y.
Plant Biotechnol. J. 2021   
Repressed OsMESL expression triggers reactive oxygen species-mediated broad-spectrum disease resistance in rice.
Dong J., Zhou L., Feng A., Zhang S., Fu H., Chen L., Zhao J., Yang T., Yang W., Ma Y., Wang J., Zhu X., Liu Q., Liu B.
Rice (N Y) 2021  14(1)  51
The OsOXO2, OsOXO3 and OsOXO4 Positively Regulate Panicle Blast Resistance in Rice.
Ma F., Yang X., Shi Z., Miao X.
New Phytol. 2020  225(1)  474-487
Novel crosstalk between ethylene- and jasmonic acid-pathway responses to a piercing-sucking insect in rice.
Yu Y., Zhou Y.F., Feng Y.Z., He H., Lian J.P., Yang Y.W., Lei M.Q., Zhang Y.C., Chen Y.Q.
Plant Biotechnol. J. 2020  18(3)  679-690
Transcriptional landscape of pathogen-responsive lncRNAs in rice unveils the role of ALEX1 in jasmonate pathway and disease resistance.
Liu M., Zhang S., Hu J., Sun W., Padilla J., He Y., Li Y., Yin Z., Liu X., Wang W., Shen D., Li D., Zhang H., Zheng X., Cui Z., Wang G.L., Wang P., Zhou B., Zhang Z.
Proc. Natl. Acad. Sci. U.S.A. 2019  116(35)  17572-17577
Phosphorylation-guarded light-harvesting complex II contributes to broad-spectrum blast resistance in rice.
Hong Y., Liu Q., Cao Y., Zhang Y., Chen D., Lou X., Cheng S., Cao L.
Front Plant Sci 2019  10  752
The <i>OsMPK15</i> Negatively Regulates <i>Magnaporthe oryza</i> and <i>Xoo</i> disease resistance via SA and JA Signaling Pathway in Rice.
Ke Y., Kang Y., Wu M., Liu H., Hui S., Zhang Q., Li X., Xiao J., Wang S.
Rice (N Y) 2019  12(1)  25
Jasmonic Acid-Involved OsEDS1 Signaling in Rice-Bacteria Interactions.
Liu D., Shi S., Hao Z., Xiong W., Luo M.
Int J Mol Sci 2019  20(9) 
OsbZIP81, A Homologue of Arabidopsis VIP1, May Positively Regulate JA Levels by Directly Targetting the Genes in JA Signaling and Metabolism Pathway in Rice.
Kachewar N.R., Gupta V., Ranjan A., Patel H.K., Sonti R.V.
BMC Plant Biol. 2019  19(1)  530
Overexpression of OsPUB41, a rice E3 ubiquitin ligase induced by cell wall degrading enzymes, enhances immune responses in Rice and Arabidopsis.
Tang J., Wang Y., Yin W., Dong G., Sun K., Teng Z., Wu X., Wang S., Qian Y., Pan X., Qian Q., Chu C.
Plant Physiol. 2019  181(3)  1295-1313
Mutation of a Nucleotide-Binding Leucine-Rich Repeat Immune Receptor-Type Protein Disrupts Immunity to Bacterial Blight.
Yuenyong W., Chinpongpanich A., Comai L., Chadchawan S., Buaboocha T.
BMC Plant Biol. 2018  18(1)  335
Downstream components of the calmodulin signaling pathway in the rice salt stress response revealed by transcriptome profiling and target identification.
Aung M.S., Kobayashi T., Masuda H., Nishizawa N.K.
Physiol Plant 2018   
Rice HRZ ubiquitin ligases are crucial for response to excess iron.
Hu L., Ye M., Kuai P., Ye M., Erb M., Lou Y.
New Phytol. 2018  219(3)  1097-1111
OsLRR-RLK1, an early responsive leucine-rich repeat receptor-like kinase, initiates rice defense responses against a chewing herbivore.
Huo X., Wu S., Zhu Z., Liu F., Fu Y., Cai H., Sun X., Gu P., Xie D., Tan L., Sun C.
Nat Commun 2017  8(1)  1497
NOG1 increases grain production in rice.
Hu L., Wu Y., Wu D., Rao W., Guo J., Ma Y., Wang Z., Shangguan X., Wang H., Xu C., Huang J., Shi S., Chen R., Du B., Zhu L., He G.
Plant Cell 2017  29(12)  3157-3185
The Coiled-Coil and Nucleotide Binding Domains of BROWN PLANTHOPPER RESISTANCE14 Function in Signaling and Resistance against Planthopper in Rice.
Duan L., Xiao W., Xia F., Liu H., Xiao J., Li X., Wang S.
Plant Physiol. 2016  172(3)  1959-1972
Two Different Transcripts of a LAMMER Kinase Gene Play Opposite Roles in disease resistance.
Song A., Xue G., Cui P., Fan F., Liu H., Yin C., Sun W., Liang Y.
Sci Rep 2016  6  24640
The role of silicon in enhancing resistance to bacterial blight of hydroponic- and soil-cultured rice.
Kobayashi T., Itai R.N., Senoura T., Oikawa T., Ishimaru Y., Ueda M., Nakanishi H., Nishizawa N.K.
Plant Mol. Biol. 2016  91(4-5)  533-47
Jasmonate signaling is activated in the very early stages of iron deficiency responses in rice roots.
Cheng X., Wu Y., Guo J., Du B., Chen R., Zhu L., He G.
Plant J. 2013  76(4)  687-98
A rice lectin receptor-like kinase that is involved in innate immune responses also contributes to seed germination.
Geng S., Li A., Tang L., Yin L., Wu L., Lei C., Guo X., Zhang X., Jiang G., Zhai W., Wei Y., Zheng Y., Lan X., Mao L.
J. Exp. Bot. 2013  64(11)  3125-36
TaCPK2-A, a calcium-dependent protein kinase gene that is required for wheat powdery mildew resistance enhances bacterial blight resistance in transgenic rice.
Zhou Y., Huang W., Liu L., Chen T., Zhou F., Lin Y.
BMC Plant Biol. 2013  13  132
Identification and functional characterization of a rice NAC gene involved in the regulation of leaf senescence.
Matsushita A., Inoue H., Goto S., Nakayama A., Sugano S., Hayashi N., Takatsuji H.
Plant J. 2012   
The nuclear ubiquitin proteasome degradation affects WRKY45 function in the rice defense program.
Liu H., Li X., Xiao J., Wang S.
Plant Methods 2012  8(1)  2
A convenient method for simultaneous quantification of multiple phytohormones and metabolites: application in study of rice-bacterium interaction.
Marla S.S., Singh V.K.
Funct. Integr. Genomics 2012  12(2)  265-75
LOX genes in blast fungus (Magnaporthe grisea) resistance in rice.
Chen M., Zeng H., Qiu D., Guo L., Yang X., Shi H., Zhou T., Zhao J.
PLoS ONE 2012  7(5)  e37654
Purification and characterization of a novel hypersensitive response-inducing elicitor from Magnaporthe oryzae that triggers defense response in rice.
Xie X.Z., Xue Y.J., Zhou J.J., Zhang B., Chang H., Takano M.
Mol Plant 2011  4(4)  688-96
Phytochromes regulate SA and JA signaling pathways in rice and are required for developmentally controlled resistance to Magnaporthe grisea.
Shen X., Liu H., Yuan B., Li X., Xu C., Wang S.
Plant Cell Environ. 2011  34(2)  179-91
OsEDR1 negatively regulates rice bacterial resistance via activation of ethylene biosynthesis.
Qi J., Zhou G., Yang L., Erb M., Lu Y., Sun X., Cheng J., Lou Y.
Plant Physiol. 2011  157(4)  1987-99
The Chloroplast-Localized Phospholipases D alpha4 and alpha5 Regulate Herbivore-Induced Direct and Indirect Defenses in Rice.
Peng D.H., Qiu D.W., Ruan L.F., Zhou C.F., Sun M.
Mol. Plant Microbe Interact. 2011  24(10)  1239-46
Protein elicitor PemG1 from Magnaporthe grisea induces systemic acquired resistance (SAR) in plants.
Lu J., Ju H., Zhou G., Zhu C., Erb M., Wang X., Wang P., Lou Y.
Plant J. 2011  68(4)  583-96
An EAR-motif-containing ERF transcription factor affects herbivore-induced signaling, defense and resistance in rice.
Shen X,Yuan B,Liu H,Li X,Xu C,Wang S
Plant J. 2010  64(1)  86-99
Opposite functions of a rice mitogen-activated protein kinase in the process of resistance against Xanthomonas oryzae.
Zhou G,Qi J,Ren N,Cheng J,Erb M,Mao B,Lou Y
Plant J. 2009  60(4)  638-48
Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder.
Tao Z,Liu H,Qiu D,Zhou Y,Li X,Xu C,Wang S
Plant Physiol. 2009  151(2)  936-48
A pair of allelic WRKY genes play opposite roles in rice-bacteria interactions.
Qiu,D., Xiao,J., Ding,X., Xiong,M., Cai,M., Cao,Y., Li,X., Xu,C. and Wang,S.
Mol. Plant Microbe Interact. 2007  20(5)  492-499
OsWRKY13 mediates rice disease resistance by regulating defense-related genes in salicylate- and jasmonate-dependent signaling
Schaffrath,U., Zabbai,F. and Dudler,R.
Eur. J. Biochem. 2000  267(19)  5935-5942
Characterization of RCI-1, a chloroplastic rice lipoxygenase whose synthesis is induced by chemical plant resistance activators.
Peng,Y.L., Shirano,Y., Ohta,H., Hibino,T., Tanaka,K. and Shibata,D.
J. Biol. Chem. 1994  269(5)  3755-3761
A novel lipoxygenase from rice. Primary structure and specific expression upon incompatible infection with rice blast fungus.
DB Reference
Gramene ID -
Ontologies
Gene Ontology aromatic compound biosynthetic process( GO:0019438 )
response to bacterium( GO:0009617 )
defense response to nematode( GO:0002215 )
response to fungus( GO:0009620 )
response to starvation( GO:0042594 )
cellular response to phosphate starvation( GO:0016036 )
defense response to virus( GO:0051607 )
defense response to fungus( GO:0050832 )
jasmonic acid mediated signaling pathway( GO:0009867 )
oxylipin biosynthetic process( GO:0031408 )
phytoene dehydrogenase activity( GO:0016166 )
defense response to insect( GO:0002213 )
iron ion binding( GO:0005506 )
chloroplast( GO:0009507 )
response to wounding( GO:0009611 )
lipoxygenase activity( GO:0016165 )
jasmonic acid biosynthetic process( GO:0009695 )
defense response to bacterium( GO:0042742 )
response to other organism( GO:0051707 )
cellular response to iron ion starvation( GO:0010106 )
response to salt stress( GO:0009651 )
regulation of jasmonic acid biosynthetic process( GO:0080141 )
Trait Ontology jasmonic acid content( TO:0002668 )
bacterial blight disease resistance( TO:0000175 )
silicon sensitivity( TO:0000031 )
iron sensitivity( TO:0000224 )
salt tolerance( TO:0006001 )
disease resistance( TO:0000112 )
brown planthopper resistance( TO:0000424 )
blast disease( TO:0000074 )
viral disease resistance( TO:0000148 )
phosphorus sensitivity( TO:0000102 )
nematode damage resistance( TO:0000384 )
aroma( TO:0000087 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 17, 2026


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