Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol BZIP54
Gene Symbol Synonym OsbZIP54, OsFD6
CGSNL Gene Name b-ZIP TRANSCRIPTION FACTOR 54
Gene Name Synonym b-ZIP transcription factor 54, FD Transcription Factor 6
Protein Name b-ZIP TRANSCRIPTION FACTOR 54
Allele
Chromosome No. 6
Explanation a possible candidate CT (cold tolerance) gene on qCTS6 (QTL for cold tolerance at the seedling stage on chromosome 6).
Trait Class Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. CT834745
MSU ID LOC_Os06g50480.1
RAP ID Os06g0719500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yang L., Wang J., Han Z., Lei L., Liu H.L., Zheng H., Xin W., Zou D.
BMC Plant Biol. 2021  21(1)  278
Combining QTL-seq and linkage mapping to fine map a candidate gene in qCTS6 for cold tolerance at the seedling stage in rice.
Tsuji H., Nakamura H., Taoka K., Shimamoto K.
Plant Cell Physiol. 2013  54(3)  385-97
Functional diversification of FD transcription factors in rice, components of florigen activation complexes.
Nijhawan A,Jain M,Tyagi AK,Khurana JP
Plant Physiol. 2008  146  333-50
Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice.
DB Reference
Gramene ID -
Ontologies
Gene Ontology response to cold( GO:0009409 )
transcription factor activity( GO:0003700 )
sequence-specific DNA binding( GO:0043565 )
Trait Ontology cold tolerance( TO:0000303 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Sep 23, 2021

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