Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol RITA1
Gene Symbol Synonym OsbZIP20, bZIP20, RITA-1, OsRITA1, RISBZ3, OsRISBZ3
CGSNL Gene Name RICE TRANSCRIPTION ACTIVATOR 1
Gene Name Synonym b-ZIP transcription factor 20, rice seed b-Zipper 3, rice transcription activator-1
Protein Name RICE TRANSCRIPTION ACTIVATOR 1
Allele bzip20
Chromosome No. 2
Explanation L34551. GO:2001250: positive regulation of ammonia assimilation cycle. GO:0098869: cellular oxidant detoxification. GO:2000280: regulation of root development. GO:1904965: regulation of vitamin E biosynthetic process.
Trait Class Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Other
Expression
Sequence/Locus
cDNA Accession No. AK070674
MSU ID LOC_Os02g16680.1
LOC_Os02g16680.2
RAP ID Os02g0266800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Kazemzadeh S., Farrokhi N., Ahmadikhah A., Ingvarsson P.K.
BMC Plant Biol. 2025  25(1)  1302
Interplay of rice vitamin E under osmotic and extreme temperature stresses revealed by a comparative transcriptomic approach.
Sun L., Di D.W., Li G., Kronzucker H.J., Wu X., Shi W.
J. Exp. Bot. 2020   
Endogenous ABA Alleviates Rice Ammonium Toxicity by Reducing ROS and Free Ammonium via Regulation of the SAPK9-bZIP20 Pathway.
Nijhawan A,Jain M,Tyagi AK,Khurana JP
Plant Physiol. 2008  146  333-50
Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice.
Onodera,Y., Suzuki,A., Wu,C., Washida,H. and Takaiwa,F.
J. Biol. Chem. 2001  276(17)  14139-14152
A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif
Izawa,T., Foster,R., Nakajima,M., Shimamoto,K. and Chua,N.H.
Plant Cell 1994  6(9)  1277-1287
The rice bZIP transcriptional activator RITA-1 is highly expressed during seed development.
DB Reference
Gramene ID -
Ontologies
Gene Ontology transcription factor activity( GO:0003700 )
sequence-specific DNA binding( GO:0043565 )
response to abscisic acid stimulus( GO:0009737 )
abscisic acid mediated signaling( GO:0009738 )
response to ammonium ion( GO:0060359 )
ammonia assimilation cycle( GO:0019676 )
root development( GO:0048364 )
response to salt stress( GO:0009651 )
response to cold( GO:0009409 )
response to heat( GO:0009408 )
response to water deprivation( GO:0009414 )
vitamin E biosynthetic process( GO:0010189 )
Trait Ontology root development trait( TO:0000656 )
abscisic acid sensitivity( TO:0000615 )
hydrogen peroxide content( TO:0000605 )
heat tolerance( TO:0000259 )
cold tolerance( TO:0000303 )
salt tolerance( TO:0006001 )
drought tolerance( TO:0000276 )
Plant Ontology root development stage( PO:0007520 )
Related Strains
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Phenotype images
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Last updated
Jan 16, 2026


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