Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol _
Gene Symbol Synonym OsBiP1, BiP1, BiP, Bip3, OsBiP3, BIP1/OsBIP3, OsMed37_2, Med37_2
CGSNL Gene Name _
Gene Name Synonym ER chaperone BiP1, Binding protein 1, binding protein, endosperm lumenal binding protein, endoplasmic reticulum (ER) chaperone BiP3, Polypeptide chain-binding protein, Mediator 37_2
Protein Name _
Chromosome No. 2
Explanation AF006825. D21113. high molecular weight heat shock protein (HMW HSP). classified as HSP70.
Trait Class Biochemical character
Seed - Morphological traits - Endosperm
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
cDNA Accession No. AK065743
MSU ID LOC_Os02g02410.1
RAP ID Os02g0115900
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Liu X.H., Lyu Y.S., Yang W., Yang Z.T., Lu S.J., Liu J.X.
Plant Biotechnol. J. 2020  18(5)  1317-1329
A membrane-associated NAC transcription factor OsNTL3 is involved in thermotolerance in rice.
Ishimaru T., Parween S., Saito Y., Shigemitsu T., Yamakawa H., Nakazono M., Masumura T., Nishizawa N.K., Kondo M., Sreenivasulu N.
Plant Cell Physiol. 2019  60(3)  626-642
Laser Microdissection-Based Tissue-Specific Transcriptome Analysis Reveals a Novel Regulatory Network of Genes Involved in Heat-Induced Grain Chalk in Rice Endosperm.
Ma J., Wang Y., Ma X., Meng L., Jing R., Wang F., Wang S., Cheng Z., Zhang X., Jiang L., Wang J., Wang J., Zhao Z., Guo X., Lin Q., Wu F., Zhu S., Wu C., Ren Y., Lei C., Zhai H., Wan J.
Plant Biotechnol. J. 2019   
Disruption of gene SPL35, encoding a novel CUE domain-containing protein, leads to cell death and enhanced disease response in rice.
Qian D., Chen G., Tian L., Qu L.Q.
Plant Physiol. 2018  178(1)  402-412
OsDER1 Is an ER-Associated Protein Degradation Factor That Responds to ER Stress.
Malik N., Dwivedi N., Singh A.K., Parida S.K., Agarwal P., Thakur J.K., Tyagi A.K.
Sci Rep 2016  6  23253
An Integrated Genomic Strategy Delineates Candidate Mediator Genes Regulating grain size and Weight in Rice.
Zhang X., Zheng X., Ke S., Zhu H., Liu F., Zhang Z., Peng X., Guo L., Zeng R., Hou P., Liu Z., Wu S., Song M., Yang J., Zhang G.
Plant Mol. Biol. 2016  92(6)  701-715
ER-localized adenine nucleotide transporter ER-ANT1: an integrator of energy and stress signaling in rice.
Cheng Q., Zhou Y., Liu Z., Zhang L., Song G., Guo Z., Wang W., Qu X., Zhu Y., Yang D.
Plant Biol (Stuttg) 2014   
An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced UNFOLDED PROTEIN RESPONSE in rice.
Ohta M., Takaiwa F.
Plant Signal Behav 2014  9(2)  e28194
Emerging features of ER resident J-proteins in plants.
Zhang L., Jiang D., Pang J., Chen R., Wang X., Yang D.
Plant Mol. Biol. 2013  83(1-2)  153-61
The endoplasmic reticulum stress induced by highly expressed OsrAAT reduces seed size via pre-mature programmed cell death.
Kudo K., Ohta M., Yang L., Wakasa Y., Takahashi S., Takaiwa F.
Plant Mol. Biol. 2013  81(4-5)  461-75
ER stress response induced by the production of human IL-7 in rice endosperm cells.
Jung K.H., Gho H.J., Nguyen M.X., Kim S.R., An G.
Funct. Integr. Genomics 2013  13(3)  391-402
Genome-wide expression analysis of HSP70 family genes in rice and identification of a cytosolic HSP70 gene highly induced under heat stress.
Ohta M., Wakasa Y., Takahashi H., Hayashi S., Kudo K., Takaiwa F.
J. Exp. Bot. 2013  64(18)  5429-41
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants.
Wakasa Y., Hayashi S., Takaiwa F.
Planta 2012  236(5)  1519-27
Expression of OsBiP4 and OsBiP5 is highly correlated with the endoplasmic reticulum stress response in rice.
Hayashi S., Wakasa Y., Takahashi H., Kawakatsu T., Takaiwa F.
Plant J. 2012  69  946-956
Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice.
Fukuda M., Satoh-Cruz M., Wen L., Crofts A.J., Sugino A., Washida H., Okita T.W., Ogawa M., Kawagoe Y., Maeshima M., Kumamaru T.
Plant Physiol. 2011  157(2)  632-44
The small GTPase Rab5a is essential for intracellular transport of proglutelin from the Golgi apparatus to the protein storage vacuole and endosomal membrane organization in developing rice endosperm.
Chang-Jin Park, Bart R., Chern M., Patrick E Canlas, Bai W., Pamela C Ronald
PLoS ONE 2010  5(2)  e9262
Overexpression of the endoplasmic reticulum chaperone BiP3 regulates XA21-mediated innate immunity in rice.
Wakasa Y,Yasuda H,Oono Y,Kawakatsu T,Hirose S,Takahashi H,Hayashi S,Yang L,Takaiwa F
Plant J. 2010  65(5)  675-89
Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
Yasuda H,Hirose S,Kawakatsu T,Wakasa Y,Takaiwa F
Plant Cell Physiol. 2009  50(8)  1532-43
Overexpression of BiP has inhibitory effects on the accumulation of seed storage proteins in endosperm cells of rice.
Takemoto,Y., Coughlan,S.J., Okita,T.W., Satoh,H., Ogawa,M. and Kumamaru,T.
Plant Physiol. 2002  128(4)  1212-1222
The rice mutant esp2 greatly accumulates the glutelin precursor and deletes the protein disulfide isomerase.
Muench,D.G., Wu,Y., Zhang,Y., Li,X., Boston,R.S. and Okita,T.W.
Plant Cell Physiol. 1997  38(4)  404-412
Molecular cloning, expression and subcellular localization of a BiP homolog from rice endosperm tissue.
Hihara,Y., Shoda,K., Liu,Q., Hara,C., Umeda,M., Toriyama,K. and Uchiyama,H.
Plant Biotechnol. 1997  14(1)  71-75
Expressed sequence tags in developing anthers of rice (Oryza sativa L.)
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DB Reference
Gramene ID -
Gene Ontology vacuole( GO:0005773 )
plasma membrane( GO:0005886 )
response to heat( GO:0009408 )
response to endoplasmic reticulum stress( GO:0034976 )
ATP binding( GO:0005524 )
cell wall( GO:0005618 )
nucleolus( GO:0005730 )
endoplasmic reticulum lumen( GO:0005788 )
'de novo' protein folding( GO:0006458 )
response to unfolded protein( GO:0006986 )
protein folding in endoplasmic reticulum( GO:0034975 )
polar nucleus fusion( GO:0010197 )
response to cadmium ion( GO:0046686 )
Trait Ontology chalky endosperm( TO:0000266 )
heat tolerance( TO:0000259 )
amylose content( TO:0000196 )
floury endosperm( TO:0000104 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jun 8, 2020