Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CYP40A
Gene Symbol Synonym OsCYP40a, OsCYP-13, OsCYP40-1a, OsCYP40-1b
Gene Name Synonym cyclophilin 40a, cyclophilin 13
Protein Name CYCLOPHILIN 40A
Chromosome No. 6
Explanation OsCYP-13 in Trivedi et al. 2013. OsCYP40-1a and OsCYP40-1b in Kumari et al. 2014. LOC_Os06g11320.
Trait Class Biochemical character
cDNA Accession No. AK068112
MSU ID LOC_Os06g11320.1
RAP ID Os06g0216800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
TextPresso Search Search textpresso for CYP40A ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
cytoplasm( GO:0005737 )
protein folding( GO:0006457 )
vegetative phase change( GO:0010050 )
floral meristem determinacy( GO:0010582 )
Trait Ontology -
Plant Ontology -
Related Strains
Phenotype images
Last updated
Mar 7, 2015