Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CYP38
Gene Symbol Synonym OsCYP38, OsCYP38a, OsCYP38b
CGSNL Gene Name CYCLOPHILIN 38
Gene Name Synonym cyclophilin 38
Protein Name CYCLOPHILIN 38
Allele
Chromosome No. 8
Explanation LOC_Os08g29370.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK099874
MSU ID LOC_Os08g29370.1
LOC_Os08g29370.2
RAP ID Os08g0382400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
TextPresso Search Search textpresso for CYP38 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
protein folding( GO:0006457 )
chloroplast thylakoid membrane( GO:0009535 )
chloroplast stroma( GO:0009570 )
thylakoid lumen( GO:0031977 )
defense response to bacterium( GO:0042742 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 7, 2015

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