Update info.Gene - Detail
Detail of Gene
Click here for feedback| Basic Information | |
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| CGSNL Gene Symbol | CYP20-3 |
| Gene Symbol Synonym | OsCYP20-3, OsCYP-5 |
| CGSNL Gene Name | CYCLOPHILIN 20-3 |
| Gene Name Synonym | cyclophilin 20-3, cyclophilin 5 |
| Protein Name | CYCLOPHILIN 20-3 |
| Allele | |
| Chromosome No. | 1 |
| Explanation | OsCYP-5 in Trivedi et al. 2013. LOC_Os01g18210. |
| Trait Class |
Biochemical character
Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance |
| Expression | |
| Sequence/Locus | |
| cDNA Accession No. |
AK243124
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| MSU ID |
LOC_Os01g18210.1
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| RAP ID |
Os01g0284700 |
| Links |
Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB ( IRGSP 1.0 / Build5 ) Related IDs List ( IRGSP 1.0 / Build5 ) |
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INSD Accession List (Test version) |
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| Map | |
| Locate(cM) | |
| Link map | Classical linkage map |
| References | |
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Swain D.M., Sahoo R.K., Srivastava V.K., Tripathy B.C., Tuteja R., Tuteja N.
Planta 2016 Function of heterotrimeric G-protein gamma subunit RGG1 in providing salinity stress tolerance in rice by elevating detoxification of ROS.
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Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014 Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
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Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013 6(5) e25260 Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
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Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010 10 253 Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
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| TextPresso Search | Search textpresso for CYP20-3 ( Recent references may be retrievable, but without any warranty ) |
| DB Reference | |
| Gramene ID | - |
| Ontologies | |
| Gene Ontology |
protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 ) protein folding( GO:0006457 ) response to salt stress( GO:0009651 ) apoplast( GO:0048046 ) chloroplast envelope( GO:0009941 ) chloroplast stroma( GO:0009570 ) cytosolic ribosome( GO:0022626 ) thylakoid lumen( GO:0031977 ) chloroplast thylakoid membrane( GO:0009535 ) cysteine biosynthetic process( GO:0019344 ) defense response to bacterium( GO:0042742 ) response to abscisic acid stimulus( GO:0009737 ) response to light intensity( GO:0009642 ) response to mannitol stimulus( GO:0010555 ) response to oxidative stress( GO:0006979 ) response to abiotic stimulus( GO:0009628 ) |
| Trait Ontology |
abiotic stress trait( TO:0000168 )
bacterial disease resistance( TO:0000315 ) |
| Plant Ontology | - |
| Related Strains | |
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| Phenotype images | |
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| Last updated | |
| Feb 24, 2017 | |
