Gene - Detail

Detail of Gene

Basic Information
CGSNL Gene Symbol CYP20-3
Gene Symbol Synonym OsCYP20-3, OsCYP-5
CGSNL Gene Name CYCLOPHILIN 20-3
Gene Name Synonym cyclophilin 20-3, cyclophilin 5
Protein Name CYCLOPHILIN 20-3
Allele
Chromosome No. 1
Explanation OsCYP-5 in Trivedi et al. 2013. LOC_Os01g18210.
Trait Class Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK243124
MSU ID LOC_Os01g18210.1
RAP ID Os01g0284700
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Swain D.M., Sahoo R.K., Srivastava V.K., Tripathy B.C., Tuteja R., Tuteja N.
Planta 2016   
Function of heterotrimeric G-protein gamma subunit RGG1 in providing salinity stress tolerance in rice by elevating detoxification of ROS.
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
protein folding( GO:0006457 )
response to salt stress( GO:0009651 )
apoplast( GO:0048046 )
chloroplast envelope( GO:0009941 )
chloroplast stroma( GO:0009570 )
cytosolic ribosome( GO:0022626 )
thylakoid lumen( GO:0031977 )
chloroplast thylakoid membrane( GO:0009535 )
cysteine biosynthetic process( GO:0019344 )
defense response to bacterium( GO:0042742 )
response to abscisic acid stimulus( GO:0009737 )
response to light intensity( GO:0009642 )
response to mannitol stimulus( GO:0010555 )
response to oxidative stress( GO:0006979 )
response to abiotic stimulus( GO:0009628 )
Trait Ontology abiotic stress trait( TO:0000168 )
bacterial disease resistance( TO:0000315 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Feb 24, 2017

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