Gene - Detail

Detail of Gene

Click here for feedback

Basic Information
CGSNL Gene Symbol CYP20-1
Gene Symbol Synonym OsCYP20-1, OsCYP-17, OsCYP20-1a, OsCYP20-1b
CGSNL Gene Name CYCLOPHILIN 20-1
Gene Name Synonym cyclophilin 20-1, cyclophilin 17
Protein Name CYCLOPHILIN 20-1
Allele
Chromosome No. 6
Explanation OsCYP-17 in Trivedi et al. 2013. LOC_Os06g49480.
Trait Class Biochemical character
Expression
Sequence/Locus
cDNA Accession No. AK060865
MSU ID LOC_Os06g49480.1
LOC_Os06g49480.2
RAP ID Os06g0708500
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version) 		-
Map
Locate(cM)
Link map Classical linkage map
References
Yoon D.H., Lee S.S., Park H.J., Lyu J.I., Chong W.S., Liu J.R., Kim B.G., Ahn J.C., Cho H.S.
J. Exp. Bot. 2016  67(1)  69-82
Overexpression of OsCYP19-4 increases tolerance to cold stress and enhances grain yield in rice (Oryza sativa).
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
TextPresso Search Search textpresso for CYP20-1 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
multivesicular body( GO:0005771 )
endoplasmic reticulum( GO:0005783 )
Golgi stack( GO:0005795 )
cytosol( GO:0005829 )
plasma membrane( GO:0005886 )
protein folding( GO:0006457 )
chloroplast( GO:0009507 )
root development( GO:0048364 )
Trait Ontology -
Plant Ontology -
Related Strains
-
Phenotype images
-
Last updated
Jan 8, 2016

/rice/oryzabase