Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CYP19-3
Gene Symbol Synonym OsCYP19-3, Cyp1, OsCYP-25, OsCYP19-2a, OsCYP19-2b
CGSNL Gene Name CYCLOPHILIN 19-3
Gene Name Synonym cyclophilin 19-3, cyclophilin 1, cyclophilin 25
Protein Name CYCLOPHILIN 19-3
Allele
Chromosome No. 9
Explanation L29471. OsCYP-25 in Trivedi et al. 2013. OsCYP19-2a and OsCYP19-2b in Kumari et al. 2014. LOC_Os09g39780.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK103109
MSU ID LOC_Os09g39780.1
LOC_Os09g39780.2
RAP ID Os09g0571400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
Buchholz,W.G., Harris-Haller,L., DeRose,R.T. and Hall,T.C.
Plant Mol. Biol. 1994  25(5)  837-843
Cyclophilins are encoded by a small gene family in rice.
TextPresso Search Search textpresso for CYP19-3 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
protein folding( GO:0006457 )
response to cadmium ion( GO:0046686 )
Trait Ontology -
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Mar 7, 2015


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