Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CYP18-2
Gene Symbol Synonym OsCYP18-2, OsCYP-23, OsCYP18-2a, OsCYP18-2b, OsCYP18-2c, SIP12
CGSNL Gene Name CYCLOPHILIN 18-2
Gene Name Synonym cyclophilin 18-2, cyclophilin 23, SKIP interacting protein 12, SKIPa-interacting protein 12, SKIPa-interacting protein 12
Protein Name CYCLOPHILIN 18-2
Allele
Chromosome No. 8
Explanation OsCYP-23 in Trivedi et al. 2013. LOC_Os08g44520 (Os08g0559400/Os08g0559501). a homologue of human peptidyl-prolyl isomerase-like 1 (PPiL1). EU368702.
Trait Class Biochemical character
Tolerance and resistance - Stress tolerance
Expression
Sequence/Locus
cDNA Accession No. AK072675
MSU ID LOC_Os08g44520.1
LOC_Os08g44520.2
LOC_Os08g44520.3
RAP ID Os08g0559400
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Lee S.S., Park H.J., Yoon D.H., Kim B.G., Ahn J.C., Luan S., Cho H.S.
Plant Cell Environ. 2015   
Rice cyclophilin OsCYP18-2 is translocated to the nucleus by an interaction with SKIP and enhances drought tolerance in rice and Arabidopsis.
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
Hou X,Xie K,Yao J,Qi Z,Xiong L
Proc. Natl. Acad. Sci. U.S.A. 2009  106  6410-5
A homolog of human ski-interacting protein in rice positively regulates cell viability and stress tolerance.
TextPresso Search Search textpresso for CYP18-2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
nucleus( GO:0005634 )
protein folding( GO:0006457 )
response to water deprivation( GO:0009414 )
response to salt stress( GO:0009651 )
cytoskeleton( GO:0005856 )
cell cycle( GO:0007049 )
Trait Ontology drought tolerance( TO:0000276 )
salt tolerance( TO:0006001 )
Plant Ontology -
Related Strains
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Phenotype images
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Last updated
Jun 3, 2016


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