Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol CYP20-2
Gene Symbol Synonym OsCYP20-2, OsCYP-11, OsNuCYP20-2
Gene Name Synonym cyclophilin 20-2, rice thylakoid lumenal cyclophilin OsCYP20-2, cyclophilin 11
Protein Name CYCLOPHILIN 20-2
Allele oscyp20-2, oscyp20-2t1
Chromosome No. 5
Explanation OsCYP-11 in Trivedi et al. 2013. D16053. GO:2000377: regulation of reactive oxygen species metabolic process. TO:0000847: panicle inflorescence morphology trait.
Trait Class Biochemical character
Reproductive organ - panicle
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
cDNA Accession No. AK119201
MSU ID LOC_Os05g01270.1
RAP ID Os05g0103200
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
Link map Classical linkage map
Ge Q., Tang Y., Luo W., Zhang J., Chong K., Xu Y.
Rice (N Y) 2020  13(1)  64
A Cyclophilin OsCYP20-2 Interacts with OsSYF2 to Regulate Grain Length by Pre-mRNA Splicing.
Ge Q., Zhang Y., Xu Y., Bai M., Luo W., Wang B., Niu Y., Zhao Y., Li S., Weng Y., Wang Z., Qian Q., Chong K.
New Phytol. 2020  225(6)  2453-2467
cyclophilin OsCYP20-2 with a novel variant integrates defense and cell elongation for chilling response in rice.
Kumari S., Joshi R., Singh K., Roy S., Tripathi A.K., Singh P., Singla-Pareek SL., Pareek A.
Funct. Integr. Genomics 2014   
Expression of a cyclophilin OsCyp2-P isolated from a salt-tolerant landrace of rice in tobacco alleviates stress via ion homeostasis and limiting ROS accumulation.
Trivedi D.K., Ansari M.W., Tuteja N.
Commun Integr Biol 2013  6(5)  e25260
Multiple abiotic stress responsive rice cyclophilin: (OsCYP-25) mediates a wide range of cellular responses.
Kim S.K., You Y.N., Park J.C., Joung Y., Kim B.G., Ahn J.C., Cho H.S.
Plant Cell Rep. 2012  31(2)  417-26
The rice thylakoid lumenal cyclophilin OsCYP20-2 confers enhanced environmental stress tolerance in tobacco and Arabidopsis.
Jun Cheul Ahn, Dae-Won Kim, Young Nim You, Min Sook Seok, Jeong Mee Park, Hwang H., Beom-Gi Kim, Luan S., Hong-Seog Park, Hye Sun Cho
BMC Plant Biol. 2010  10  253
Classification of rice (Oryza sativa L. Japonica nipponbare) immunophilins (FKBPs, CYPs) and expression patterns under water stress.
Sasaki,T., Song,J., Koga-Ban,Y., Matsui,E., Fang,F., Higo,H., Nagasaki,H., Hori,M., Miya,M. and Murayama-Kayano,E.
Plant J. 1994  6(4)  615-624
Toward cataloguing all rice genes: large-scale sequencing of randomly chosen rice cDNAs from a callus cDNA library.
TextPresso Search Search textpresso for CYP20-2 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Gene Ontology regulation of seed development( GO:0080050 )
chloroplast thylakoid membrane( GO:0009535 )
chloroplast thylakoid lumen( GO:0009543 )
NAD(P)H dehydrogenase complex assembly( GO:0010275 )
spliceosome assembly( GO:0000245 )
regulation of carbohydrate metabolic process( GO:0006109 )
regulation of cell growth( GO:0001558 )
regulation of nuclear mRNA splicing, via spliceosome( GO:0048024 )
protein peptidyl-prolyl isomerization( GO:0000413 )
peptidyl-prolyl cis-trans isomerase activity( GO:0003755 )
protein folding( GO:0006457 )
chloroplast stromal thylakoid( GO:0009533 )
response to cold( GO:0009409 )
unidimensional cell growth( GO:0009826 )
nucleus( GO:0005634 )
chloroplast( GO:0009507 )
Trait Ontology cold tolerance( TO:0000303 )
hydrogen peroxide content( TO:0000605 )
grain length( TO:0000734 )
grain shape( TO:0002730 )
panicle length( TO:0000040 )
grain yield( TO:0000396 )
Plant Ontology -
Related Strains
Phenotype images
Last updated
Jan 12, 2021