Gene - Detail

Detail of Gene

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Basic Information
CGSNL Gene Symbol ARF17
Gene Symbol Synonym OsARF17
CGSNL Gene Name AUXIN RESPONSE FACTOR 17
Gene Name Synonym auxin response factor-17, auxin response factor 17
Protein Name AUXIN RESPONSE FACTOR 17
Allele osarf17, 17cas-2-1, 17cas-5-2
Chromosome No. 6
Explanation Q653U3. TO: 0000829: leaf lamina morphology trait. GO:2000012: regulation of auxin polar transport. GO:0140272: exogenous protein binding. GO:2000652: regulation of secondary cell wall biogenesis. TO:0000993: cellulose content. GO:2001008: positive regulation of cellulose biosynthetic process. TO:0020100: nitrate uptake. GO:1902025: nitrate import. TO:0020098: nitrate sensitivity. GO:1901698: response to nitrogen compound.
Trait Class Vegetative organ - Leaf
Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Other
Expression
Sequence/Locus
cDNA Accession No. AK103280
MSU ID LOC_Os06g46410.1
LOC_Os06g46410.2
RAP ID Os06g0677800
Links Oryzabase Chromosome View ( IRGSP 1.0 / Build5 )
RAP-DB ( IRGSP 1.0 / Build5 )
Related IDs List ( IRGSP 1.0 / Build5 )
INSD Accession List
(Test version)
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Map
Locate(cM)
Link map Classical linkage map
References
Ma F., Zhang F., Zhu Y., Lan D., Yan P., Wang Y., Hu Z., Zhang X., Hu J., Niu F., Liu M., He S., Cui J., Yuan X., Yan Y., Wu S., Cao L., Bian H., Yang J., Li Z., Luo X.
J Integr Plant Biol 2023  65(7)  1753-1766
Auxin signaling module OsSK41-OsIAA10-OsARF regulates grain yield traits in rice.
Ma Q., Wang F., Song W., Huang C., Xie K., Wei Z., Li Y., Chen J., Zhang H., Sun Z.
Front Microbiol 2023  14  1131212
Transcriptome analysis of auxin transcription factor OsARF17-mediated rice stripe mosaic virus response in rice.
Wang J., Liu Y., Hu S., Xu J., Nian J., Cao X., Chen M., Cen J., Liu X., Zhang Z., Liu D., Zhu L., Hu J., Ren D., Gao Z., Shen L., Dong G., Zhang Q., Li Q., Yu S., Qian Q., Zhang G.
Int J Mol Sci 2022  23(15) 
<i>LEAF TIP RUMPLED 1</i> Regulates Leaf Morphology and salt tolerance in Rice.
Suzuki G., Fukuda M., Lucob-Agustin N., Inukai Y., Gomi K.
Plants (Basel) 2022  11(12) 
The Mutation of Rice MEDIATOR25, OsMED25, Induces Rice Bacterial Blight Resistance through Altering Jasmonate- and Auxin-Signaling.
Huang G., Hu H., van de Meene A., Zhang J., Dong L., Zheng S., Zhang F., Betts N.S., Liang W., Bennett M.J., Persson S., Zhang D.
Plant Cell 2021  33(9)  3120-3133
AUXIN RESPONSE FACTORS 6 and 17 control the flag leaf angle in rice by regulating secondary cell wall biosynthesis of lamina joints.
Zhang H., Li L., He Y., Qin Q., Chen C., Wei Z., Tan X., Xie K., Zhang R., Hong G., Li J., Li J., Yan C., Yan F., Li Y., Chen J., Sun Z.
Proc. Natl. Acad. Sci. U.S.A. 2020  117(16)  9112-9121
Distinct modes of manipulation of rice auxin response factor OsARF17 by different plant RNA viruses for infection.
Li Y., Li J., Chen Z., Wei Y., Qi Y., Wu C.
Plant Biotechnol. J. 2020   
OsmiR167a-targeted auxin response factors modulate tiller angle via fine-tuning auxin distribution in rice.
Zhang S., Zhu L., Shen C., Ji Z., Zhang H., Zhang T., Li Y., Yu J., Yang N., He Y., Tian Y., Wu K., Wu J., Harberd N.P., Zhao Y., Fu X., Wang S., Li S.
Plant Cell 2020   
Natural allelic variation in a modulator of auxin homeostasis improves grain yield and nitrogen use efficiency in rice.
Zhao Z.X., Feng Q., Cao X.L., Zhu Y., Wang H., Chandran V., Fan J., Zhao J.Q., Pu M., Li Y., Wang W.M.
J Integr Plant Biol 2019   
Osa-miR167d facilitates infection of Magnaporthe oryzae in rice.
Chen S.H., Zhou L.J., Xu P., Xue H.W.
PLoS Genet. 2018  14(11)  e1007829
SPOC domain-containing protein Leaf inclination3 interacts with LIP1 to regulate rice leaf inclination through auxin signaling.
Ni J.a b, Zhu Z.b c, Wang G.c, Shen Y.a, Zhang Y.a, Wu P.b
PLoS ONE 2014  9 
Intragenic suppressor of Osiaa23 revealed a conserved Tryptophan residue crucial for protein-protein interactions
Shen C,Wang S,Bai Y,Wu Y,Zhang S,Chen M,Guilfoyle TJ,Wu P,Qi Y
J. Exp. Bot. 2010  61(14)  3971-81
Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.).
Wang D., Pei K., Fu Y., Sun Z., Li S., Liu H., Tang K., Han B., Tao Y.
Gene 2007  394(1-2)  13-24
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
TextPresso Search Search textpresso for ARF17 ( Recent references may be retrievable, but without any warranty )
DB Reference
Gramene ID -
Ontologies
Gene Ontology regulation of abscisic acid biosynthetic process( GO:0010115 )
regulation of auxin biosynthetic process( GO:0010600 )
regulation of jasmonic acid biosynthetic process( GO:0080141 )
jasmonic acid mediated signaling pathway( GO:0009867 )
response to ammonium ion( GO:0060359 )
response to nitrate( GO:0010167 )
defense response to fungus( GO:0050832 )
flower development( GO:0009908 )
secondary cell wall biogenesis( GO:0009834 )
lignin metabolic process( GO:0009808 )
cellulose biosynthetic process( GO:0030244 )
defense response to virus( GO:0051607 )
response to auxin stimulus( GO:0009733 )
gravitropism( GO:0009630 )
auxin polar transport( GO:0009926 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
auxin mediated signaling pathway( GO:0009734 )
Trait Ontology leaf angle( TO:0000206 )
leaf lamina joint bending( TO:0002688 )
blast disease( TO:0000074 )
gravity response trait( TO:0002693 )
black streak dwarf virus resistance( TO:0000020 )
auxin sensitivity( TO:0000163 )
tiller angle( TO:0000567 )
flag leaf angle( TO:0000124 )
grain yield( TO:0000396 )
lignin content( TO:0000731 )
plant height( TO:0000207 )
tiller number( TO:0000346 )
tillering ability( TO:0000329 )
viral disease resistance( TO:0000148 )
Plant Ontology flag leaf( PO:0020103 )
leaf lamina( PO:0020039 )
Related Strains
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Phenotype images
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Last updated
Oct 12, 2023


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