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Basic Information
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CGSNL Gene Symbol
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ARF17
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Gene Symbol Synonym
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OsARF17
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CGSNL Gene Name
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AUXIN RESPONSE FACTOR 17
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Gene Name Synonym
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auxin response factor-17, auxin response factor 17
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Protein Name
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AUXIN RESPONSE FACTOR 17
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Allele
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osarf17
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Chromosome No.
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6
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Explanation
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Q653U3. TO: 0000829: leaf lamina morphology trait. GO:2000012: regulation of auxin polar transport. GO:0140272: exogenous protein binding. GO:2000652: regulation of secondary cell wall biogenesis. TO:0000993: cellulose content. GO:2001008: positive regulation of cellulose biosynthetic process. TO:0020100: nitrate uptake. GO:1902025: nitrate import. TO:0020098: nitrate sensitivity. GO:1901698: response to nitrogen compound.
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Trait Class
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Vegetative organ - Leaf
Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK103280
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MSU ID
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LOC_Os06g46410.1
LOC_Os06g46410.2
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RAP ID
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Os06g0677800
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Wang J., Liu Y., Hu S., Xu J., Nian J., Cao X., Chen M., Cen J., Liu X., Zhang Z., Liu D., Zhu L., Hu J., Ren D., Gao Z., Shen L., Dong G., Zhang Q., Li Q., Yu S., Qian Q., Zhang G.
Int J Mol Sci 2022 23(15)
<i>LEAF TIP RUMPLED 1</i> Regulates Leaf Morphology and salt tolerance in Rice.
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Suzuki G., Fukuda M., Lucob-Agustin N., Inukai Y., Gomi K.
Plants (Basel) 2022 11(12)
The Mutation of Rice MEDIATOR25, OsMED25, Induces Rice Bacterial Blight Resistance through Altering Jasmonate- and Auxin-Signaling.
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Huang G., Hu H., van de Meene A., Zhang J., Dong L., Zheng S., Zhang F., Betts N.S., Liang W., Bennett M.J., Persson S., Zhang D.
Plant Cell 2021 33(9) 3120-3133
AUXIN RESPONSE FACTORS 6 and 17 control the flag leaf angle in rice by regulating secondary cell wall biosynthesis of lamina joints.
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Li Y., Li J., Chen Z., Wei Y., Qi Y., Wu C.
Plant Biotechnol. J. 2020
OsmiR167a-targeted auxin response factors modulate tiller angle via fine-tuning auxin distribution in rice.
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Zhang H., Li L., He Y., Qin Q., Chen C., Wei Z., Tan X., Xie K., Zhang R., Hong G., Li J., Li J., Yan C., Yan F., Li Y., Chen J., Sun Z.
Proc. Natl. Acad. Sci. U.S.A. 2020 117(16) 9112-9121
Distinct modes of manipulation of rice auxin response factor OsARF17 by different plant RNA viruses for infection.
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Zhang S., Zhu L., Shen C., Ji Z., Zhang H., Zhang T., Li Y., Yu J., Yang N., He Y., Tian Y., Wu K., Wu J., Harberd N.P., Zhao Y., Fu X., Wang S., Li S.
Plant Cell 2020
Natural allelic variation in a modulator of auxin homeostasis improves grain yield and nitrogen use efficiency in rice.
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Zhao Z.X., Feng Q., Cao X.L., Zhu Y., Wang H., Chandran V., Fan J., Zhao J.Q., Pu M., Li Y., Wang W.M.
J Integr Plant Biol 2019
Osa-miR167d facilitates infection of Magnaporthe oryzae in rice.
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Chen S.H., Zhou L.J., Xu P., Xue H.W.
PLoS Genet. 2018 14(11) e1007829
SPOC domain-containing protein Leaf inclination3 interacts with LIP1 to regulate rice leaf inclination through auxin signaling.
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Ni J.a b, Zhu Z.b c, Wang G.c, Shen Y.a, Zhang Y.a, Wu P.b
PLoS ONE 2014 9
Intragenic suppressor of Osiaa23 revealed a conserved Tryptophan residue crucial for protein-protein interactions
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Shen C,Wang S,Bai Y,Wu Y,Zhang S,Chen M,Guilfoyle TJ,Wu P,Qi Y
J. Exp. Bot. 2010 61(14) 3971-81
Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.).
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Wang D., Pei K., Fu Y., Sun Z., Li S., Liu H., Tang K., Han B., Tao Y.
Gene 2007 394(1-2) 13-24
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
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TextPresso Search
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Search textpresso for ARF17
( Recent references may be retrievable, but without any warranty )
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to ammonium ion( GO:0060359 )
response to nitrate( GO:0010167 )
defense response to fungus( GO:0050832 )
flower development( GO:0009908 )
secondary cell wall biogenesis( GO:0009834 )
lignin metabolic process( GO:0009808 )
cellulose biosynthetic process( GO:0030244 )
defense response to virus( GO:0051607 )
response to auxin stimulus( GO:0009733 )
gravitropism( GO:0009630 )
auxin polar transport( GO:0009926 )
DNA binding( GO:0003677 )
nucleus( GO:0005634 )
transcription( GO:0006350 )
regulation of transcription, DNA-dependent( GO:0006355 )
auxin mediated signaling pathway( GO:0009734 )
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Trait Ontology
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leaf angle( TO:0000206 )
leaf lamina joint bending( TO:0002688 )
blast disease( TO:0000074 )
gravity response trait( TO:0002693 )
black streak dwarf virus resistance( TO:0000020 )
auxin sensitivity( TO:0000163 )
tiller angle( TO:0000567 )
flag leaf angle( TO:0000124 )
grain yield( TO:0000396 )
lignin content( TO:0000731 )
plant height( TO:0000207 )
tiller number( TO:0000346 )
tillering ability( TO:0000329 )
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Plant Ontology
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flag leaf( PO:0020103 )
leaf lamina( PO:0020039 )
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Related Strains
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Phenotype images
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Last updated
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Mar 15, 2023
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