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Basic Information
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CGSNL Gene Symbol
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ARF16
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Gene Symbol Synonym
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OsARF16, OsARF2, OsARF1
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CGSNL Gene Name
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AUXIN RESPONSE FACTOR 16
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Gene Name Synonym
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auxin response factor-16, auxin response factor 16, auxin response factor-2, auxin response factor 2, auxin response factor-1, auxin response factor 1
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Protein Name
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AUXIN RESPONSE FACTOR 16
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Allele
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Chromosome No.
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1
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Explanation
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AB071300, Q5NB85. OsARF2 in Waller et al. 2002. OsARF1 in Shao et al. 2019, He et al. 2020, Maliket al. 2020, Zhang et al. 2020. GO:1901698: response to nitrogen compound. TO:0020100: nitrate uptake. GO:1902025: nitrate import. TO:0020098: nitrate sensitivity.
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Trait Class
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Tolerance and resistance - Stress tolerance
Other
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Expression
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Sequence/Locus
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cDNA Accession No.
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AK064007
AK102521
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MSU ID
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LOC_Os01g13520.1
LOC_Os01g13520.2
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RAP ID
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Os01g0236300
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Links
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Oryzabase Chromosome View
(
IRGSP 1.0
/
Build5
)
RAP-DB
(
IRGSP 1.0
/
Build5
)
Related IDs List (
IRGSP 1.0
/
Build5
)
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INSD Accession List
(Test version)
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-
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Map
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Locate(cM)
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Link map
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Classical linkage map
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References
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Malik N., Ranjan R., Parida S.K., Agarwal P., Tyagi A.K.
Plant J. 2020 101(6) 1411-1429
Mediator subunit OsMED14_1 plays an important role in rice development.
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Zhang S., Zhu L., Shen C., Ji Z., Zhang H., Zhang T., Li Y., Yu J., Yang N., He Y., Tian Y., Wu K., Wu J., Harberd N.P., Zhao Y., Fu X., Wang S., Li S.
Plant Cell 2020
Natural allelic variation in a modulator of auxin homeostasis improves grain yield and nitrogen use efficiency in rice.
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He Y., Zhao J., Yang B., Sun S., Peng L., Wang Z.
Plant Biotechnol. J. 2020
Indole-3-acetate beta-glucosyltransferase OsIAGLU regulates seed vigour through mediating crosstalk between auxin and abscisic acid in rice.
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Shao Y., Zhou H.Z., Wu Y., Zhang H., Lin J., Jiang X., He Q., Zhu J., Li Y., Yu H., Mao C.
Plant Cell 2019 31(6) 1257-1275
OsSPL3, an SBP-Domain Protein, Regulates crown root Development in Rice.
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Shen C,Wang S,Bai Y,Wu Y,Zhang S,Chen M,Guilfoyle TJ,Wu P,Qi Y
J. Exp. Bot. 2010 61(14) 3971-81
Functional analysis of the structural domain of ARF proteins in rice (Oryza sativa L.).
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Wang D., Pei K., Fu Y., Sun Z., Li S., Liu H., Tang K., Han B., Tao Y.
Gene 2007 394(1-2) 13-24
Genome-wide analysis of the auxin response factors (ARF) gene family in rice (Oryza sativa).
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Waller,F., Furuya,M. and Nick,P.
Plant Mol. Biol. 2002 50(3) 415-425
OsARF1, an auxin response factor from rice, is auxin-regulated and classifies as a primary auxin responsive gene.
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Y Sato, A Nishimura, M Ito, M Ashikari, H Y Hirano, M Matsuoka
Genes Genet. Syst. 2001 76(6) 373-80
Auxin response factor family in rice.
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DB Reference
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Gramene ID
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-
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Ontologies
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Gene Ontology
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response to ammonium ion( GO:0060359 )
response to nitrate( GO:0010167 )
regulation of transcription, DNA-dependent( GO:0006355 )
transcription( GO:0006350 )
nucleus( GO:0005634 )
DNA binding( GO:0003677 )
auxin mediated signaling pathway( GO:0009734 )
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Trait Ontology
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-
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Plant Ontology
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-
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Related Strains
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-
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Phenotype images
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Last updated
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Mar 15, 2023
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