Gene - List

Keyword (e.g. Oshox*, Os01*,salt stress , salt AND stress more information)

List of Gene

You can further refine your search from the results list.

The top 100 Gene Ontology, Plant Ontology,Trait Ontology and Trait Class are being displayed.

Gene Ontology Plant Ontology Trait Ontology Trait Class

Click on the headings of each column to sort the data. By default, it is sorted by relevance.

Search Condition : Filter(traitClassFacetEn:099_Other)
3,244 Hit First Previous 1-50 51-100 101-150 151-200 201-250 251-300 Next Last All    Download ( You can download a maximum of 10000 lines.)
CGSNL
Gene
Symbol 		Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID MSU ID Mutant
Image
BRL1 OsBRL1
 BRI1 LIKE 1 BRI1-like receptor kinase 1
 9 Other
 GO:0009729 - detection of brassinosteroid stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0004872 - receptor activity
GO:0004672 - protein kinase activity
GO:0004674 - protein serine/threonine kinase activity
GO:0005524 - ATP binding
GO:0005886 - plasma membrane
 Os09g0293500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g12240.1
BRL3 OsBRL3
 BRI1 LIKE 3 BRI1-like receptor kinase 3
 8 Other
 GO:0009729 - detection of brassinosteroid stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0004872 - receptor activity
GO:0004672 - protein kinase activity
GO:0004674 - protein serine/threonine kinase activity
GO:0005524 - ATP binding
GO:0005886 - plasma membrane
 Os08g0342300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os08g25380.1
MADS51 OsMADS51
OsMADS65
MADS65
qHd1
DLN36
OsDLN36
 MADS BOX GENE 51 MADS box gene51
DLN repressor 36
DLN motif protein 36
 1 Character as QTL - Yield and productivity
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Seed - Morphological traits
Character as QTL - Plant growth activity
Other
Tolerance and resistance - Disease resistance
 GO:0003700 - transcription factor activity
GO:0006350 - transcription
GO:0005634 - nucleus
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009408 - response to heat
GO:0050832 - defense response to fungus
GO:0009409 - response to cold
GO:0043565 - sequence-specific DNA binding
 TO:0000396 - grain yield
TO:0000259 - heat tolerance
TO:0000432 - temperature response trait
TO:0000137 - days to heading
TO:0002616 - flowering time
TO:0000449 - grain yield per plant
TO:0000152 - panicle number
TO:0000455 - seed set percent
TO:0000329 - tillering ability
TO:0000357 - growth and development trait
TO:0000074 - blast disease
TO:0000590 - grain weight
TO:0000303 - cold tolerance
 Os01g0922800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g69850.1
MIR156B miR156b
OsmiR156b
osmiR156b
osa-miR156b
osa-MIR156b
miR156b*osa-miR156b-3p osa-miR156b-5p
 MICRORNA156B micro RNA 156b
microRNA156b
osa-miRNA156b
 1 Tolerance and resistance - Disease resistance
Other
Character as QTL - Plant growth activity
 GO:0050832 - defense response to fungus
GO:0006379 - mRNA cleavage
GO:0016442 - RNA-induced silencing complex
GO:0035068 - micro-ribonucleoprotein complex
GO:0035195 - gene silencing by miRNA
GO:0010050 - vegetative phase change
GO:0032350 - regulation of hormone metabolic process
 TO:0000357 - growth and development trait
TO:0000074 - blast disease
TO:0000476 - growth hormone content
 PO:0009005 - root
PO:0009049 - inflorescence
PO:0000009 - cultured plant callus
PO:0009025 - vascular leaf
-
SDT miR156h
OsmiR156h
osmiR156h
osa-miR156h
osa-MIR156hosa-miR156h-3p osa-miR156h-5p
 SEMIDWARF AND HIGH-TILLERING micro RNA 156h
microRNA156h
osa-miRNA156h
semidwarf and high-tillering
 6 Tolerance and resistance - Stress tolerance
Other
Character as QTL - Yield and productivity
Vegetative organ - Culm
Tolerance and resistance - Disease resistance
 GO:0007623 - circadian rhythm
GO:0050832 - defense response to fungus
GO:0006379 - mRNA cleavage
GO:0016442 - RNA-induced silencing complex
GO:0035068 - micro-ribonucleoprotein complex
GO:0035195 - gene silencing by miRNA
 TO:0000050 - inflorescence branching
TO:0000074 - blast disease
TO:0000207 - plant height
TO:0000329 - tillering ability
TO:0000068 - lodging incidence
TO:0000346 - tiller number
TO:0000396 - grain yield
 PO:0000009 - cultured plant callus
PO:0009005 - root
PO:0009025 - vascular leaf
PO:0009049 - inflorescence
-
SPT16 Osspt16
OsMetAP3
MetAP3
 SUPPRESSOR OF TY16 Oryza sativa suppressor of Ty 16 (homolog of the yeast. spt16 gene)
FACT complex subunit SPT16
Facilitates chromatin transcription complex subunit SPT16
methionine aminopeptidase 3
 4 Other
 GO:0006281 - DNA repair
GO:0006260 - DNA replication
GO:0045449 - regulation of transcription
GO:0006350 - transcription
GO:0005694 - chromosome
GO:0005634 - nucleus
 Os04g0321600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g25550.1
RA2 ra2
Osra2
OsCrll4
CRL1L4
CRLL4
OsRA2
OsLBD13
LBD13
 RAMOSA 2 ramosa2
ra2 ortholog
Crl1-like 4
OsRAMOSA2
OsRAMOSA 2
Lateral Organ Boundaries Domain protein 13
 1 Other
Reproductive organ - Inflorescence
 GO:0001709 - cell fate determination
GO:0010229 - inflorescence development
GO:0005634 - nucleus
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0003700 - transcription factor activity
GO:0010199 - organ boundary specification between lateral organs and the meristem
 TO:0000557 - secondary branch number
TO:0000184 - seed anatomy and morphology trait
TO:0000621 - inflorescence development trait
TO:0000630 - pedicel length
 PO:0001083 - inflorescence development stage
PO:0006327 - spikelet meristem
PO:0009049 - inflorescence
PO:0009030 - carpel
PO:0009105 - inflorescence branch meristem
Os01g0169400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g07480.2
LOC_Os01g07480.1
FLO27 OsbZIP58
bZIP58
OsEnS-92
OsSMF1
SMF1
OsRISBZ1
RISBZ1/bZIP58
RISBZ1
OsFLO27
 FLOURY ENDOSPERM 27 bZIP transcription factor 58
rice seed b-Zipper 1
endosperm-specific gene 92
seed maturation factor 1
rice seed basic leucine zipper 1
RICE SEED bZIP1
 7 Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Dormancy
Seed - Morphological traits - Grain shape
Seed - Morphological traits - Endosperm
Other
 GO:0034976 - response to endoplasmic reticulum stress
GO:0009408 - response to heat
GO:0009845 - seed germination
GO:0010371 - regulation of gibberellin biosynthetic process
GO:0010581 - regulation of starch biosynthetic process
GO:0009960 - endosperm development
GO:0012501 - programmed cell death
GO:0010431 - seed maturation
GO:0043565 - sequence-specific DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0030968 - endoplasmic reticulum unfolded protein response
 TO:0002653 - endosperm storage protein content
TO:0002661 - seed maturation
TO:0000104 - floury endosperm
TO:0000432 - temperature response trait
TO:0000259 - heat tolerance
TO:0002673 - amino acid content
TO:0000590 - grain weight
TO:0000399 - grain thickness
TO:0000402 - grain width
TO:0000734 - grain length
TO:0000196 - amylose content
TO:0000696 - starch content
TO:0002656 - starch grain shape
TO:0000100 - shrunken endosperm
TO:0000487 - endosperm color
TO:0000490 - protein composition related trait
 PO:0007057 - 0 seed germination stage
PO:0007632 - seed maturation stage
PO:0009089 - endosperm
PO:0005360 - aleurone layer
PO:0007633 - endosperm development stage
Os07g0182000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g08420.1
RPBF OsDof3
OsDOF3
OsEnS-34
OsDof10
Dof10
OsDof-10
OsDOF1
DOF1
DOF3
OsRPBF
OsDOF7
 RICE PROLAMIN BOX BINDING FACTOR rice (Oryza sativa) prolamin box binding factor
pyrimidine box-binding protein
endosperm-specific gene 34
Dof zinc factor 10
Dof transcription factor 10
DNA BINDING WITH ONE FINGER 10
 2 Seed - Physiological traits - Storage substances
Tolerance and resistance
Tolerance and resistance - Stress tolerance
Other
Seed - Physiological traits - Longevity
Seed - Physiological traits
 GO:0006952 - defense response
GO:0009651 - response to salt stress
GO:0008270 - zinc ion binding
GO:0009414 - response to water deprivation
GO:0010029 - regulation of seed germination
GO:0003677 - DNA binding
GO:0006979 - response to oxidative stress
GO:0006970 - response to osmotic stress
GO:0045449 - regulation of transcription
 TO:0000179 - biotic stress trait
TO:0006004 - raffinose content
TO:0002673 - amino acid content
TO:0000250 - vigor related trait
TO:0000276 - drought tolerance
TO:0000430 - germination rate
TO:0006001 - salt tolerance
TO:0002657 - oxidative stress
TO:0000095 - osmotic response sensitivity
 PO:0009010 - seed
PO:0001170 - seed development stage
Os02g0252400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g15350.1
TAS3 TAS3
 TRANS-ACTING siRNA3 TRANS-ACTING siRNA3
 Other
 GO:0016246 - RNA interference
 -
YAB5 OsYAB5
OsYAB3
YAB3
TOB1
OsTOB1
 YABBY 5 Protein YABBY 5
TONGARI-BOUSHI1
TONGARI-BOUSHI 1
 4 Other
Reproductive organ - Spikelet, flower, glume, awn
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
Vegetative organ - Culm
 GO:0051510 - regulation of unidimensional cell growth
GO:0009685 - gibberellin metabolic process
GO:0045487 - gibberellin catabolic process
GO:0080006 - internode patterning
GO:0009408 - response to heat
GO:0010073 - meristem maintenance
GO:0048437 - floral organ development
GO:0010229 - inflorescence development
GO:0009739 - response to gibberellin stimulus
GO:0005634 - nucleus
GO:0030154 - cell differentiation
GO:0046872 - metal ion binding
GO:0009937 - regulation of gibberellic acid mediated signaling
GO:0048366 - leaf development
GO:0009908 - flower development
 TO:0000655 - leaf development trait
TO:0000207 - plant height
TO:0002675 - gibberellic acid content
TO:0000145 - internode length
TO:0002689 - leaf sheath length
TO:0000072 - awn length
TO:0000019 - seedling height
TO:0000165 - panicle exsertion
TO:0000040 - panicle length
TO:0000166 - gibberellic acid sensitivity
TO:0000622 - flower development trait
TO:0000259 - heat tolerance
TO:0000657 - spikelet anatomy and morphology trait
TO:0002600 - flower organ size
TO:0006038 - floral organ number
TO:0000621 - inflorescence development trait
 PO:0001083 - inflorescence development stage
PO:0000017 - vascular leaf primordium
PO:0020104 - leaf sheath
PO:0009051 - spikelet
PO:0025487 - bract primordium
PO:0007615 - flower development stage
PO:0025034 - leaf
PO:0001050 - leaf development stage
PO:0025477 - floral organ primordium
Os04g0536300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g45330.1
MAR5 Osmar5
 TC1/MARINER TRANSPOSABLE ELEMENT 5 Tc1/mariner element 5
Mariner 5
mariner-like element 5
Tc1/Mariner-like element 5
 6 Other
 GO:0032196 - transposition
 -
RIRE1 RIRE1
Osr11
Rire1
 GYPSY TYPE RETROTRANSPOSON rice gypsy type retrotransposon
LTR retrotransposon Osr11
 1 Other
 GO:0032196 - transposition
 -
RIRE9 RIRE9
Osr27
Rire9
 GYPSY TYPE RETROTRANSPOSON rice gypsy type retrotransposon
LTR retrotransposon Osr27
 6 Other
 GO:0032196 - transposition
 -
RIRE10 RIRE10
 GYPSY TYPE RETROTRANSPOSON rice gypsy type retrotransposon
 Other
 GO:0032196 - transposition
 -
ADART aDart
 AUTONOMOUS DNA-BASED ACTIVE RICE TRANSPOSON autonomous DNA-based active rice transposon
 Other
 GO:0032196 - transposition
 -
DART Dart
 DNA-BASED ACTIVE RICE TRANSPOSON DNA-based active rice transposon
 Other
 GO:0032196 - transposition
 -
NDART1 nDart
nDART1
nDART
 NONAUTONOMOUS DNA-BASED ACTIVE RICE TRANSPOSON 1 nonautonomous DNA-based active rice transposon
Nonautonomous Ds-related active rice transposon
 Other
 GO:0032196 - transposition
 -
RF2A RF2a
OsbZIP75
 bZIP TRANSCRIPTION FACTOR RF2A Transcription factor RF2a
bZIP transcription factor 75
 9 Other
 GO:0006355 - regulation of transcription, DNA-dependent
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0046983 - protein dimerization activity
GO:0043565 - sequence-specific DNA binding
GO:0006350 - transcription
 Os09g0516200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g34060.1
RF2B RF2b
OsRF2B
OsbZIP30
bZIP30
 bZIP TRANSCRIPTION FACTOR RF2B Transcription factor RF2b
bZIP transcription factor 30
 3 Other
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
 GO:0045847 - negative regulation of nitrogen utilization
GO:0010167 - response to nitrate
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0042128 - nitrate assimilation
GO:0046983 - protein dimerization activity
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0006355 - regulation of transcription, DNA-dependent
GO:0006350 - transcription
GO:0043565 - sequence-specific DNA binding
 TO:0000397 - grain size
TO:0000357 - growth and development trait
TO:0000396 - grain yield
TO:0000011 - nitrogen sensitivity
TO:0000382 - 1000-seed weight
TO:0000402 - grain width
TO:0000449 - grain yield per plant
TO:0000734 - grain length
TO:0000040 - panicle length
TO:0000207 - plant height
 PO:0009005 - root
PO:0009051 - spikelet
Os03g0336200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g21800.1
LOC_Os03g21800.2
RL9 rl9
SLL1/RL9
SLL1
OsSLL1
OsADD1
ADD1
AH2
OsAH2
CL1
OsCL1
OsKAN1
KAN1
 ROLLED LEAF 9 SHALLOT-LIKE1
SHALLOT-LIKE 1
ROLLED LEAF9
anther dehiscence defected 1
abnormal hull 2
curling leaf 1
KANADI1
OsKANADI1
 9 Coloration - Chlorophyll
Other
Character as QTL - Plant growth activity
Vegetative organ - Leaf
Seed - Morphological traits - Grain shape
Reproductive organ - Inflorescence
Vegetative organ - Root
Reproductive organ - Spikelet, flower, glume, awn
Character as QTL - Grain quality
Character as QTL - Yield and productivity
Reproductive organ - panicle
Seed - Morphological traits
Vegetative organ - Culm
 GO:0009685 - gibberellin metabolic process
GO:0045487 - gibberellin catabolic process
GO:0006351 - transcription, DNA-dependent
GO:0009739 - response to gibberellin stimulus
GO:0009957 - epidermal cell fate specification
GO:0051510 - regulation of unidimensional cell growth
GO:0080006 - internode patterning
GO:0048364 - root development
GO:0003677 - DNA binding
GO:0003682 - chromatin binding
GO:0005634 - nucleus
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0006355 - regulation of transcription, DNA-dependent
GO:0048366 - leaf development
GO:0009555 - pollen development
GO:0010229 - inflorescence development
GO:0012501 - programmed cell death
GO:0042127 - regulation of cell proliferation
GO:0030154 - cell differentiation
GO:0048653 - anther development
GO:0048437 - floral organ development
GO:0001558 - regulation of cell growth
GO:0010088 - phloem development
GO:0010158 - abaxial cell fate specification
GO:0048316 - seed development
 TO:0000085 - leaf rolling
TO:0000397 - grain size
TO:0006022 - floral organ development trait
TO:0000587 - endosperm quality
TO:0000474 - glume opening
TO:0000079 - lemma and palea anatomy and morphology trait
TO:0000207 - plant height
TO:0000421 - pollen fertility
TO:0001006 - adventitious root number
TO:0000165 - panicle exsertion
TO:0000495 - chlorophyll content
TO:0000227 - root length
TO:0002681 - leaf curling
TO:0001012 - lateral root length
TO:0000019 - seedling height
TO:0000657 - spikelet anatomy and morphology trait
TO:0002689 - leaf sheath length
TO:0000072 - awn length
TO:0000166 - gibberellic acid sensitivity
TO:0002675 - gibberellic acid content
TO:0000145 - internode length
TO:0000449 - grain yield per plant
TO:0000653 - seed development trait
TO:0000211 - gel consistency
TO:0000598 - protein content
TO:0000196 - amylose content
TO:0000455 - seed set percent
TO:0000734 - grain length
TO:0000040 - panicle length
TO:0000152 - panicle number
TO:0000382 - 1000-seed weight
TO:0000326 - leaf color
TO:0001027 - net photosynthetic rate
TO:0000135 - leaf length
TO:0000295 - chlorophyll-b content
TO:0002757 - flag leaf length
TO:0000370 - leaf width
TO:0000316 - photosynthetic ability
TO:0000462 - gelatinization temperature
TO:0000656 - root development trait
TO:0000396 - grain yield
TO:0000162 - seed quality
TO:0000053 - pollen sterility
TO:0000391 - seed size
TO:0000655 - leaf development trait
 PO:0001170 - seed development stage
PO:0025034 - leaf
PO:0009051 - spikelet
PO:0009047 - stem
PO:0020104 - leaf sheath
PO:0025426 - phloem development stage
PO:0000017 - vascular leaf primordium
PO:0020148 - shoot apical meristem
PO:0009049 - inflorescence
PO:0001007 - pollen development stage
PO:0009005 - root
PO:0020141 - stem node
PO:0001004 - anther development stage
PO:0025585 - floral organ formation stage
PO:0007520 - root development stage
PO:0020142 - stem internode
PO:0000293 - guard cell
PO:0006019 - leaf abaxial epidermis
PO:0001050 - leaf development stage
Os09g0395300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g23200.1
AGO11 OsAGO11
 ARGONAUTE 11 Protein argonaute 11
 3 Other
 GO:0003676 - nucleic acid binding
GO:0031047 - gene silencing by RNA
 Os03g0682600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g47830.1
AGO12 OsAGO12
 ARGONAUTE 12 Protein argonaute 12
 3 Other
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 Os03g0682200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g47820.1
AGO13 OsAGO13
 ARGONAUTE 13 Protein argonaute 13
 3 Other
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 Os03g0789500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g57560.1
AGO14 OsAGO14
 ARGONAUTE 14 Protein argonaute 14
 7 Other
 GO:0003676 - nucleic acid binding
GO:0031047 - gene silencing by RNA
 Os07g0188000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g09020.1
AGO15 OsAGO15
 ARGONAUTE 15 Protein argonaute 15
 1 Other
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 Os01g0275200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g16850.1
AGO16 OsAGO16
OsAGO6
ZP1
 ARGONAUTE 16 Protein argonaute 16
Protein ZWILLE/PINHEAD-like 1
 7 Other
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 Os07g0265600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g16224.1
AGO17 OsAGO17
 ARGONAUTE 17 Protein argonaute 17
 2 Character as QTL - Yield and productivity
Seed - Physiological traits - Storage substances
Other
Seed - Morphological traits
Reproductive organ - panicle
Vegetative organ - Culm
 GO:0003676 - nucleic acid binding
GO:0005739 - mitochondrion
GO:0031047 - gene silencing by RNA
GO:0051512 - positive regulation of unidimensional cell growth
GO:0005634 - nucleus
 TO:0000592 - 1000-dehulled grain weight
TO:0000397 - grain size
TO:0000455 - seed set percent
TO:0000266 - chalky endosperm
TO:0000456 - spikelet number
TO:0000207 - plant height
TO:0000391 - seed size
TO:0000657 - spikelet anatomy and morphology trait
TO:0000590 - grain weight
TO:0000576 - stem length
TO:0000051 - stem strength
TO:0000449 - grain yield per plant
TO:0000734 - grain length
TO:0000040 - panicle length
TO:0000339 - stem thickness
TO:0000145 - internode length
 PO:0020141 - stem node
Os02g0169400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g07310.1
AGO18 OsAGO18
 ARGONAUTE 18 Protein argonaute 18
Argonaute18
 7 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Disease resistance
Other
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0048232 - male gamete generation
GO:0009555 - pollen development
GO:0048229 - gametophyte development
GO:0003676 - nucleic acid binding
GO:0051607 - defense response to virus
GO:0005739 - mitochondrion
GO:0031047 - gene silencing by RNA
GO:0007126 - meiosis
 TO:0000437 - male sterility
TO:0000148 - viral disease resistance
 PO:0009066 - anther
Os07g0471300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g28850.1
AGO1A OsAGO1a
AGO1a
AGO10
AGO1-1
 ARGONAUTE 1A Protein argonaute 1A
Argonaute 10
 2 Other
Vegetative organ - Shoot apical meristem(SAM)
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 TO:0006020 - shoot apical meristem development
 Os02g0672200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g45070.2
LOC_Os02g45070.1
AGO1B OsAGO1b
AGO1b
AGO1-2
 ARGONAUTE 1B Protein argonaute 1B
 4 Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility
Vegetative organ - Culm
Other
 GO:0003676 - nucleic acid binding
GO:0005634 - nucleus
GO:0048366 - leaf development
GO:0031047 - gene silencing by RNA
GO:0005737 - cytoplasm
 TO:0000421 - pollen fertility
TO:0000655 - leaf development trait
TO:0000207 - plant height
TO:0000455 - seed set percent
TO:0000346 - tiller number
 PO:0025034 - leaf
PO:0001050 - leaf development stage
PO:0000002 - anther wall
Os04g0566500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g47870.2
LOC_Os04g47870.1
AGO1C OsAGO1c
OsAGO1
AGO1
AGO1c
 ARGONAUTE 1C Protein argonaute 1C
Protein argonaute 1
argonaute1
 2 Seed - Physiological traits
Other
 GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 TO:0000345 - seed viability
 Os02g0831600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g58490.1
AGO1D OsAGO1d
AGO1d
 ARGONAUTE 1D Protein argonaute 1D
 6 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Other
 GO:0009409 - response to cold
GO:0048653 - anther development
GO:0003676 - nucleic acid binding
GO:0005739 - mitochondrion
GO:0031047 - gene silencing by RNA
GO:0003723 - RNA binding
GO:0043067 - regulation of programmed cell death
 TO:0000067 - genic male sterility-thermo sensitive
TO:0002609 - stamen length
TO:0000303 - cold tolerance
TO:0000214 - anther shape
TO:0000215 - stamen anatomy and morphology trait
TO:0002601 - stamen size
TO:0000437 - male sterility
TO:0000421 - pollen fertility
 PO:0009066 - anther
PO:0000002 - anther wall
PO:0001032 - E anther wall tapetum degeneration initiated stage
PO:0001004 - anther development stage
Os06g0729300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g51310.1
LOC_Os06g51310.2
AGO2 OsAGO2
 ARGONAUTE 2 sativa Argonaute 2
Protein argonaute 2
ARGONAUTE2
 4 Tolerance and resistance - Stress tolerance
Other
Tolerance and resistance - Disease resistance
Character as QTL - Yield and productivity
Coloration - Chlorophyll
Vegetative organ - Leaf
Seed - Morphological traits - Grain shape
 GO:0009409 - response to cold
GO:0009658 - chloroplast organization
GO:0003676 - nucleic acid binding
GO:0043067 - regulation of programmed cell death
GO:0051607 - defense response to virus
GO:0031047 - gene silencing by RNA
GO:0046466 - membrane lipid catabolic process
GO:0009737 - response to abscisic acid stimulus
GO:0009690 - cytokinin metabolic process
GO:0048316 - seed development
GO:0009651 - response to salt stress
GO:0050687 - negative regulation of defense response to virus
GO:0006306 - DNA methylation
GO:0010150 - leaf senescence
 TO:0000734 - grain length
TO:0000455 - seed set percent
TO:0000615 - abscisic acid sensitivity
TO:0002660 - cytokinin content
TO:0000249 - leaf senescence
TO:0006001 - salt tolerance
TO:0002715 - chloroplast development trait
TO:0000495 - chlorophyll content
TO:0000020 - black streak dwarf virus resistance
TO:0000326 - leaf color
TO:0001015 - photosynthetic rate
TO:0000269 - 100-seed weight
TO:0000605 - hydrogen peroxide content
TO:0000449 - grain yield per plant
TO:0000396 - grain yield
TO:0000316 - photosynthetic ability
TO:0000303 - cold tolerance
 Os04g0615700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g52540.1
AGO3 OsAGO3
 ARGONAUTE 3 Protein argonaute 3
 4 Tolerance and resistance - Stress tolerance
Other
 GO:0009651 - response to salt stress
GO:0003676 - nucleic acid binding
GO:0031047 - gene silencing by RNA
 TO:0006001 - salt tolerance
 Os04g0615800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g52550.1
AGO4A OsAGO4a
AGO4-2
 ARGONAUTE 4A Protein argonaute 4A
 1 Other
Tolerance and resistance - Disease resistance
 GO:0050688 - regulation of defense response to virus
GO:0051607 - defense response to virus
GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
 TO:0000148 - viral disease resistance
TO:0002676 - brassinosteroid content
TO:0002675 - gibberellic acid content
 PO:0008016 - vegetative shoot apical meristem
Os01g0275600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g16870.4
LOC_Os01g16870.3
LOC_Os01g16870.2
LOC_Os01g16870.1
AGO4B OsAGO4b
AGO4-1
 ARGONAUTE 4B Protein argonaute 4B
 4 Other
Tolerance and resistance - Disease resistance
 GO:0031047 - gene silencing by RNA
GO:0051607 - defense response to virus
GO:0044030 - regulation of DNA methylation
GO:0050688 - regulation of defense response to virus
GO:0003676 - nucleic acid binding
GO:0010426 - DNA methylation on cytosine within a CHH sequence
 TO:0002675 - gibberellic acid content
TO:0002676 - brassinosteroid content
TO:0000148 - viral disease resistance
 PO:0008028 - reproductive shoot apical meristem
PO:0008016 - vegetative shoot apical meristem
Os04g0151800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g06770.1
LOC_Os04g06770.2
ALYL1 OsALYL1
 ALWAYS EARLYLIKE 1 ALWAYS EARLYLIKE1
 1 Other
 GO:0003677 - DNA binding
 Os01g0193900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g09760.1
IPD3 OsIPD3
Osipd3
CYCLOPS
IPD3/CYCLOPS
OsCYCLOPS
 INTERACTING PROTEIN OF DMI 3 sativa DMI3 interacting protein
sativa interacting protein of DMI3
DMI3 interacting protein IPD3
 6 Other
Biochemical character
 GO:0009620 - response to fungus
GO:0044403 - symbiosis, encompassing mutualism through parasitism
GO:0004683 - calmodulin-dependent protein kinase activity
GO:0005634 - nucleus
GO:0009609 - response to symbiotic bacterium
 PO:0009005 - root
Os06g0115600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g02520.1
HB4 OSHB4
OsHox32
HOX32
OsHB4
Oshox32
PHB3
OsHDZ13
OsHDZIP13
HDZ13
HDZIP13
 HOMEODOMAIN CONTAINING PROTEIN 4 Homeobox-leucine zipper protein HOX32
Homeodomain transcription factor HOX32
HD-ZIP protein HOX32
rice homeobox gene 32
homeodomain-leucine zipper transcription factor 13
OsHDZIP transcription factor 13
 3 Other
Vegetative organ - Culm
Coloration - Chlorophyll
Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
Tolerance and resistance - Stress tolerance
 GO:0005634 - nucleus
GO:0005886 - plasma membrane
GO:0009416 - response to light stimulus
GO:0048366 - leaf development
GO:0009753 - response to jasmonic acid stimulus
GO:0009737 - response to abscisic acid stimulus
GO:0046686 - response to cadmium ion
GO:0009733 - response to auxin stimulus
GO:0009414 - response to water deprivation
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
GO:0043565 - sequence-specific DNA binding
GO:0003700 - transcription factor activity
GO:0042546 - cell wall biogenesis
 TO:0000276 - drought tolerance
TO:0000370 - leaf width
TO:0000163 - auxin sensitivity
TO:0000207 - plant height
TO:0000615 - abscisic acid sensitivity
TO:0000655 - leaf development trait
TO:0000051 - stem strength
TO:0001017 - water use efficiency
TO:0000085 - leaf rolling
TO:0000172 - jasmonic acid sensitivity
TO:0001015 - photosynthetic rate
TO:0000206 - leaf angle
TO:0000495 - chlorophyll content
TO:0000075 - light sensitivity
 PO:0009049 - inflorescence
PO:0025034 - leaf
PO:0009005 - root
PO:0009089 - endosperm
PO:0001050 - leaf development stage
Os03g0640800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g43930.2
LOC_Os03g43930.1
ZFP157 ZINC FINGER PROTEIN 157 Other
 GO:0003677 - DNA binding
GO:0008270 - zinc ion binding
 -
ZFP173 ZINC FINGER PROTEIN 173 Other
 GO:0003677 - DNA binding
GO:0008270 - zinc ion binding
 -
ZFP176 ZINC FINGER PROTEIN 176 Other
 GO:0003677 - DNA binding
GO:0008270 - zinc ion binding
 -
ZFP177 OsSAP9
SAP9
ZFP33
 ZINC FINGER PROTEIN 177 Zinc finger A20 and AN1 domain-containing stress-associated protein 9
stress associated protein 9
 7 Tolerance and resistance - Stress tolerance
Other
 GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0006950 - response to stress
GO:0009611 - response to wounding
GO:0008270 - zinc ion binding
GO:0010446 - response to alkalinity
GO:0009409 - response to cold
GO:0003677 - DNA binding
GO:0009408 - response to heat
 TO:0000276 - drought tolerance
TO:0000481 - alkali sensitivity
TO:0000303 - cold tolerance
TO:0000164 - stress trait
TO:0006001 - salt tolerance
TO:0000259 - heat tolerance
 PO:0001170 - seed development stage
Os07g0168800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g07350.1
LOC_Os07g07350.2
LOC_Os07g07350.3
ZFP181 ZINC FINGER PROTEIN 181 Other
 GO:0003677 - DNA binding
GO:0008270 - zinc ion binding
 -
OSBZ8 OsBZ8
OsbZIP05
OsGBF1
GBF1
OsGBF1a
OsGBF1b
 BZIP PROTEIN 8 bZIP transcription factor 05
G-box-binding factor 1
 1 Tolerance and resistance - Stress tolerance
Other
 GO:0009651 - response to salt stress
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
GO:0043565 - sequence-specific DNA binding
GO:0003700 - transcription factor activity
GO:0046983 - protein dimerization activity
 TO:0006001 - salt tolerance
 Os01g0658900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g46970.2
LOC_Os01g46970.1
RAG MADS3
OsMADS3
OsMADS3(t)
RMADS222
RAG1
rf3
 RICE AGAMOUS MADS box gene3
MADS-box transcription factor 3
Protein AGAMOUS-like
fertility restoration 3
 1 Other
Reproductive organ - Inflorescence
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
 GO:0048653 - anther development
GO:0010229 - inflorescence development
GO:0030154 - cell differentiation
GO:0043565 - sequence-specific DNA binding
GO:0009908 - flower development
GO:0003677 - DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
 TO:0000622 - flower development trait
TO:0006009 - lodicule anatomy and morphology trait
TO:0000621 - inflorescence development trait
TO:0000215 - stamen anatomy and morphology trait
TO:0006023 - lodicule development trait
 PO:0001004 - anther development stage
PO:0001049 - lodicule development stage
PO:0009036 - lodicule
PO:0007615 - flower development stage
PO:0001083 - inflorescence development stage
PO:0009029 - stamen
Os01g0201700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g10504.3
LOC_Os01g10504.2
LOC_Os01g10504.1
RAP1A OsMADS15
FDRMADS3
RMADS215
MADS15
DEP
 RICE APETALA 1A MADS-box transcription factor 15
Protein APETALA1-like A
degenerative palea
MADS box gene15
 7 Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Heading date
Other
Tolerance and resistance - Stress tolerance
Reproductive organ
Vegetative organ - Leaf
 GO:0031667 - response to nutrient levels
GO:0010229 - inflorescence development
GO:0042594 - response to starvation
GO:0006355 - regulation of transcription, DNA-dependent
GO:0003700 - transcription factor activity
GO:0005515 - protein binding
GO:0005634 - nucleus
GO:0016036 - cellular response to phosphate starvation
GO:0043565 - sequence-specific DNA binding
GO:0048573 - photoperiodism, flowering
GO:0010228 - vegetative to reproductive phase transition
GO:0003006 - reproductive developmental process
GO:0006350 - transcription
 TO:0000206 - leaf angle
TO:0000102 - phosphorus sensitivity
TO:0000137 - days to heading
TO:0002616 - flowering time
TO:0000621 - inflorescence development trait
 PO:0001083 - inflorescence development stage
PO:0020094 - plant egg cell
Os07g0108900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g01820.6
LOC_Os07g01820.5
LOC_Os07g01820.4
LOC_Os07g01820.1
LOC_Os07g01820.2
LOC_Os07g01820.3
LF1 HOX10
Oshox10
OsHox10
OsHB1
HB1
OSHB1
LF1/OsHB1
OsLF1
OsHDZ9
OsHDZIP9
HDZ9
HDZIP9
 LATERAL FLORET 1 rice homeobox gene 10
Homeobox-leucine zipper protein HOX10
Homeodomain transcription factor HOX10
HD-ZIP protein HOX10
HOMEODOMAIN CONTAINING PROTEIN 1
Homeodomain transcription factor HOX10
lateral florets 1
homeodomain-leucine zipper transcription factor 9
transcription factor 9
 3 Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
Other
 GO:0003700 - transcription factor activity
GO:0006350 - transcription
GO:0009955 - adaxial/abaxial pattern formation
GO:0006355 - regulation of transcription, DNA-dependent
GO:0010582 - floral meristem determinacy
GO:0009908 - flower development
GO:0005634 - nucleus
GO:0001708 - cell fate specification
GO:0009753 - response to jasmonic acid stimulus
GO:0043565 - sequence-specific DNA binding
GO:0048366 - leaf development
 TO:0000655 - leaf development trait
TO:0000657 - spikelet anatomy and morphology trait
TO:0000614 - lemma shape
TO:0000172 - jasmonic acid sensitivity
TO:0000370 - leaf width
TO:0002672 - auxin content
 PO:0020148 - shoot apical meristem
PO:0009005 - root
PO:0005352 - xylem
PO:0009037 - lemma
PO:0001050 - leaf development stage
PO:0009047 - stem
PO:0006022 - bundle sheath extension
PO:0009049 - inflorescence
PO:0000017 - vascular leaf primordium
PO:0020104 - leaf sheath
PO:0025034 - leaf
Os03g0109400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g01890.2
LOC_Os03g01890.1
HOX11 Oshox11
OsHox11
OsHDZ30
OsHDZIP30
HDZ30
HDZIP30
 HOMEOBOX GENE 11 rice homeobox gene 11
Homeobox-leucine zipper protein HOX11
Homeodomain transcription factor HOX11
HD-ZIP protein HOX11
homeodomain-leucine zipper transcription factor 30
OsHDZIP transcription factor 30
 9 Tolerance and resistance - Stress tolerance
Other
 GO:0006355 - regulation of transcription, DNA-dependent
GO:0009651 - response to salt stress
GO:0006350 - transcription
GO:0043565 - sequence-specific DNA binding
GO:0005634 - nucleus
GO:0009741 - response to brassinosteroid stimulus
GO:0003700 - transcription factor activity
 TO:0002677 - brassinosteroid sensitivity
TO:0006001 - salt tolerance
 Os09g0447000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g27450.1
3,244 Hit First Previous 1-50 51-100 101-150 151-200 201-250 251-300 Next Last All
/rice/oryzabase