CGSNL
Gene
Symbol
|
Gene symbol synonym(s)
|
CGSNL Gene Name
|
Gene name synonym(s)
|
Chr. No.
|
Trait Class
|
Gene Ontology
|
Trait Ontology
|
Plant Ontology
|
RAP ID
|
MSU ID
|
Mutant
Image
|
|
CKX8
|
OsCKX8
|
CYTOKININ OXIDASE/DEHYDROGENASE 8
|
cytokinin oxidase 8
|
4
|
Seed - Morphological traits - Grain shape
Reproductive organ - Panicle, Mode of branching
Biochemical character
|
GO:0005615 - extracellular space
GO:0009690 - cytokinin metabolic process
GO:0050660 - FAD binding
GO:0019139 - cytokinin dehydrogenase activity
GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity
GO:0009735 - response to cytokinin stimulus
|
TO:0000557 - secondary branch number
TO:0002660 - cytokinin content
TO:0000734 - grain length
TO:0000382 - 1000-seed weight
TO:0000167 - cytokinin sensitivity
TO:0002759 - grain number
|
|
Os04g0523500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g44230.1
|
|
|
CKX11
|
OsCKX11
|
CYTOKININ OXIDASE/DEHYDROGENASE 11
|
cytokinin oxidase 11
|
8
|
Biochemical character
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
|
GO:0050660 - FAD binding
GO:0019139 - cytokinin dehydrogenase activity
GO:0009735 - response to cytokinin stimulus
GO:0005615 - extracellular space
GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity
GO:0009690 - cytokinin metabolic process
|
TO:0000266 - chalky endosperm
TO:0000455 - seed set percent
TO:0000557 - secondary branch number
TO:0000167 - cytokinin sensitivity
TO:0002660 - cytokinin content
TO:0002759 - grain number
TO:0000547 - primary branch number
|
|
Os08g0460600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os08g35860.1
|
|
|
CTB5
|
HOX14
OsHox14
OsCTB5
|
COLD TOLERANCE AT THE BOOTING STAGE 5
|
rice homeobox gene 14
Homeobox-leucine zipper protein HOX14
Homeodomain transcription factor HOX14
HD-ZIP protein HOX14
Cold Tolerance at the Booting stage 5
|
7
|
Other
Tolerance and resistance - Stress tolerance
Reproductive organ - panicle
Reproductive organ - Panicle, Mode of branching
|
GO:0043565 - sequence-specific DNA binding
GO:0003700 - transcription factor activity
GO:0006350 - transcription
GO:0048658 - tapetal layer development
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009737 - response to abscisic acid stimulus
GO:0009409 - response to cold
GO:0005634 - nucleus
GO:0009738 - abscisic acid mediated signaling
GO:0009787 - regulation of abscisic acid mediated signaling
GO:0009631 - cold acclimation
GO:0009740 - gibberellic acid mediated signaling
GO:0009939 - positive regulation of gibberellic acid mediated signaling
GO:0009739 - response to gibberellin stimulus
GO:0009685 - gibberellin metabolic process
|
TO:0002675 - gibberellic acid content
TO:0000449 - grain yield per plant
TO:0000050 - inflorescence branching
TO:0000447 - filled grain number
TO:0000165 - panicle exsertion
TO:0000137 - days to heading
TO:0000547 - primary branch number
TO:0000303 - cold tolerance
TO:0000605 - hydrogen peroxide content
TO:0000615 - abscisic acid sensitivity
TO:0000421 - pollen fertility
TO:0000166 - gibberellic acid sensitivity
TO:0000456 - spikelet number
TO:0001034 - relative plant height
|
PO:0000229 - flower meristem
PO:0020104 - leaf sheath
PO:0009005 - root
PO:0009049 - inflorescence
PO:0025034 - leaf
PO:0009105 - inflorescence branch meristem
PO:0000230 - inflorescence meristem
PO:0006327 - spikelet meristem
|
Os07g0581700
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os07g39320.1
|
|
|
DEP1
|
OsDEP1
EP
qPE9-1
DN1
DEP1/DN1/qPE9-1
qNGR9
qDEP1
RGG4/DEP1/DN1/qPE9-1/OsGGC3
RGG4
OsDN1
OsGGC3
GGC3
|
DENSE AND ERECT PANICLE 1
|
dense and erect panicle 1
erect-pose panicle
DENSE PANICLE 1
DENSE AND ERECT PANICLE1
DENSE AND ERECT PANICLES 1
G gamma subunit DEP1
Heterotrimeric G Protein gamma4 Subunit
|
9
|
Vegetative organ - Root
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Seed - Morphological traits - Grain shape
Reproductive organ - Heading date
Vegetative organ - Culm
Character as QTL - Yield and productivity
|
GO:0010729 - positive regulation of hydrogen peroxide biosynthetic process
GO:0005882 - intermediate filament
GO:0010618 - aerenchyma formation
GO:0035330 - regulation of hippo signaling cascade
GO:0043068 - positive regulation of programmed cell death
GO:0051171 - regulation of nitrogen compound metabolic process
GO:0009409 - response to cold
GO:0005634 - nucleus
GO:0005886 - plasma membrane
GO:0007186 - G-protein coupled receptor protein signaling pathway
GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0048573 - photoperiodism, flowering
GO:0010229 - inflorescence development
|
TO:0000734 - grain length
TO:0000043 - root anatomy and morphology trait
TO:0002759 - grain number
TO:0000605 - hydrogen peroxide content
TO:0000040 - panicle length
TO:0000397 - grain size
TO:0000456 - spikelet number
TO:0000276 - drought tolerance
TO:0000396 - grain yield
TO:0000455 - seed set percent
TO:0000625 - spikelet density
TO:0000050 - inflorescence branching
TO:0000152 - panicle number
TO:0000207 - plant height
TO:0000382 - 1000-seed weight
TO:0000137 - days to heading
TO:0002731 - grain length to width ratio
TO:0000303 - cold tolerance
TO:0006001 - salt tolerance
TO:0000621 - inflorescence development trait
|
|
Os09g0441900
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os09g26999.1
LOC_Os09g26999.3
LOC_Os09g26999.2
|
|
|
EP2
|
ep2
EP2/DEP2/SRS1
SRS1/DEP2
DEP2
SRS1
OsSRS1
CL7(t)
OsRELA
RELA
SUG1
OsSUG1
|
ERECT PANICLE 2
|
erect panical 2
Erect panicle2
erect panicle2-1
erect panicle2-2
dense and erect panicle 2
small and round seed 1
cleistogamy 7
cleistogamy gene on chromosome 7
regulator of leaf angle
suppressor of GS2AA 1
|
7
|
Tolerance and resistance - Disease resistance
Vegetative organ - Leaf
Reproductive organ - Panicle, Mode of branching
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
|
GO:0010422 - regulation of brassinosteroid biosynthetic process
GO:0010371 - regulation of gibberellin biosynthetic process
GO:0010200 - response to chitin
GO:0009742 - brassinosteroid mediated signaling
GO:0050832 - defense response to fungus
GO:0002221 - pattern recognition receptor signaling pathway
GO:0005634 - nucleus
GO:0002679 - respiratory burst during defense response
GO:0032491 - detection of molecule of fungal origin
GO:0001558 - regulation of cell growth
GO:0009937 - regulation of gibberellic acid mediated signaling
GO:0050777 - negative regulation of immune response
GO:0005737 - cytoplasm
GO:0009741 - response to brassinosteroid stimulus
GO:0009740 - gibberellic acid mediated signaling
GO:0009739 - response to gibberellin stimulus
GO:0006355 - regulation of transcription, DNA-dependent
|
TO:0000339 - stem thickness
TO:0000402 - grain width
TO:0000040 - panicle length
TO:0000557 - secondary branch number
TO:0000079 - lemma and palea anatomy and morphology trait
TO:0002637 - leaf size
TO:0000166 - gibberellic acid sensitivity
TO:0000397 - grain size
TO:0000399 - grain thickness
TO:0000074 - blast disease
TO:0000180 - spikelet fertility
TO:0000342 - panicle axis angle
TO:0000382 - 1000-seed weight
TO:0002730 - grain shape
TO:0000206 - leaf angle
TO:0000590 - grain weight
TO:0002677 - brassinosteroid sensitivity
TO:0002759 - grain number
TO:0000050 - inflorescence branching
TO:0002688 - leaf lamina joint bending
TO:0000734 - grain length
TO:0000207 - plant height
TO:0000472 - vascular bundle number
TO:0000051 - stem strength
|
PO:0009037 - lemma
PO:0001083 - inflorescence development stage
PO:0025034 - leaf
PO:0009049 - inflorescence
PO:0009038 - palea
PO:0009005 - root
PO:0020104 - leaf sheath
PO:0005020 - vascular bundle
PO:0009047 - stem
PO:0009082 - spikelet floret
|
Os07g0616000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os07g42410.1
|
|
|
SP3
|
OsDof15
Dof15
OsDof-15
DOF15
DLT3
OsDLT3
|
SHORT PANICLE 3
|
Dof zinc factor 15
Dof transcription factor 15
DNA BINDING WITH ONE FINGER 15
Short Panicle 3
DWARF AND LESS TILLERS ON CHROMOSOME 3
|
3
|
Vegetative organ - Root
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Other
Vegetative organ - Culm
Vegetative organ - Leaf
Reproductive organ - Heading date
|
GO:0048573 - photoperiodism, flowering
GO:0010082 - regulation of root meristem growth
GO:0009690 - cytokinin metabolic process
GO:0003677 - DNA binding
GO:0006355 - regulation of transcription, DNA-dependent
GO:0010229 - inflorescence development
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0005634 - nucleus
GO:0010081 - regulation of inflorescence meristem growth
GO:0009651 - response to salt stress
GO:0008284 - positive regulation of cell proliferation
GO:0009873 - ethylene mediated signaling pathway
GO:0048364 - root development
|
TO:0002616 - flowering time
TO:0000050 - inflorescence branching
TO:0000456 - spikelet number
TO:0000396 - grain yield
TO:0006032 - panicle size
TO:0000132 - basal internode diameter
TO:0000656 - root development trait
TO:0000329 - tillering ability
TO:0000346 - tiller number
TO:0000137 - days to heading
TO:0000621 - inflorescence development trait
TO:0000547 - primary branch number
TO:0002692 - root meristem development
TO:0000373 - inflorescence anatomy and morphology trait
TO:0002758 - flag leaf lamina width
TO:0000397 - grain size
TO:0000455 - seed set percent
TO:0000734 - grain length
TO:0000557 - secondary branch number
TO:0000145 - internode length
TO:0000371 - yield trait
TO:0000040 - panicle length
TO:0006001 - salt tolerance
TO:0000592 - 1000-dehulled grain weight
TO:0000173 - ethylene sensitivity
TO:0000434 - root activity
TO:0000207 - plant height
TO:0000227 - root length
TO:0002660 - cytokinin content
|
PO:0004709 - axillary bud
PO:0009049 - inflorescence
|
Os03g0764900
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os03g55610.1
|
|
|
SMG1
|
OsMKK4
MKK4
OsMKK4/SMG1
OsMAPKK4
MAPKK4
OsMEK4
MEK4
OsSMG1
SMG1/OsMEK6
OsMEK6
MEK6
OsSTS
STS
|
SMALL GRAIN 1
|
MAPK kinase 4
mitogen-activated protein kinase kinase 4
small grain1
LARGE11
large grain 11
salt-tolerant and small grains
|
2
|
Tolerance and resistance - Disease resistance
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
Tolerance and resistance - Insect resistance
Character as QTL - Yield and productivity
Vegetative organ - Root
Seed - Morphological traits
Seed - Morphological traits - Grain shape
Reproductive organ - Spikelet, flower, glume, awn
Biochemical character
|
GO:0005737 - cytoplasm
GO:0010200 - response to chitin
GO:0006970 - response to osmotic stress
GO:0010229 - inflorescence development
GO:0045595 - regulation of cell differentiation
GO:0050832 - defense response to fungus
GO:0016020 - membrane
GO:0009738 - abscisic acid mediated signaling
GO:0009414 - response to water deprivation
GO:0009733 - response to auxin stimulus
GO:0009735 - response to cytokinin stimulus
GO:0048364 - root development
GO:0008283 - cell proliferation
GO:0000165 - MAPKKK cascade
GO:0009741 - response to brassinosteroid stimulus
GO:0042742 - defense response to bacterium
GO:0009611 - response to wounding
GO:0005634 - nucleus
GO:0009651 - response to salt stress
GO:0009751 - response to salicylic acid stimulus
GO:0009739 - response to gibberellin stimulus
GO:0002213 - defense response to insect
GO:0080027 - response to herbivore
GO:0009409 - response to cold
GO:0009743 - response to carbohydrate stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0009690 - cytokinin metabolic process
GO:0009737 - response to abscisic acid stimulus
GO:0042127 - regulation of cell proliferation
|
TO:0000166 - gibberellic acid sensitivity
TO:0000175 - bacterial blight disease resistance
TO:0000734 - grain length
TO:0002759 - grain number
TO:0000167 - cytokinin sensitivity
TO:0000456 - spikelet number
TO:0000206 - leaf angle
TO:0000391 - seed size
TO:0000439 - fungal disease resistance
TO:0000397 - grain size
TO:0000396 - grain yield
TO:0001034 - relative plant height
TO:0000516 - relative root length
TO:0000095 - osmotic response sensitivity
TO:0000590 - grain weight
TO:0000621 - inflorescence development trait
TO:0000454 - stem borer resistance
TO:0000207 - plant height
TO:0000074 - blast disease
TO:0000160 - UV light sensitivity
TO:0000615 - abscisic acid sensitivity
TO:0002660 - cytokinin content
TO:0002669 - diterpenoid phytoalexin content
TO:0000447 - filled grain number
TO:0000276 - drought tolerance
TO:0000656 - root development trait
TO:0000303 - cold tolerance
TO:0002677 - brassinosteroid sensitivity
TO:0000040 - panicle length
TO:0000163 - auxin sensitivity
TO:0000382 - 1000-seed weight
TO:0000557 - secondary branch number
TO:0000547 - primary branch number
TO:0000455 - seed set percent
TO:0000342 - panicle axis angle
TO:0006001 - salt tolerance
|
PO:0001083 - inflorescence development stage
PO:0020104 - leaf sheath
PO:0007520 - root development stage
PO:0025034 - leaf
|
Os02g0787300
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g54600.1
|
|
|
WFP
|
OsSPL14
SPL14
IPA1
WFP/IPA1
OsSPL14/WFP/IPA1
OsIPA1
IPA1/OsSPL14
|
WEALTHY FARMER'S PANICLE
|
IDEAL PLANT ARCHITECTURE 1
Ideal Plant Architecture 1
Ideal Plant Architecture1
Squamosa promoter-binding-like protein 14
SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14
Squamosa promoter binding protein like-14
IDEAL PLANT ARCHITECTURE1
|
8
|
Seed - Physiological traits - Storage substances
Tolerance and resistance - Stress tolerance
Character as QTL - Plant growth activity
Character as QTL - Germination
Character as QTL - Yield and productivity
Vegetative organ - Root
Character as QTL - Grain quality
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
Vegetative organ - Culm
Seed - Physiological traits - Dormancy
Seed - Morphological traits - Endosperm
Vegetative organ - Leaf
Seed
|
GO:0048623 - seed germination on parent plant
GO:0009960 - endosperm development
GO:0010187 - negative regulation of seed germination
GO:0010081 - regulation of inflorescence meristem growth
GO:0010432 - bract development
GO:0010162 - seed dormancy
GO:0010371 - regulation of gibberellin biosynthetic process
GO:0060359 - response to ammonium ion
GO:0045487 - gibberellin catabolic process
GO:0006350 - transcription
GO:0008270 - zinc ion binding
GO:0042742 - defense response to bacterium
GO:0009607 - response to biotic stimulus
GO:0009409 - response to cold
GO:0009626 - plant-type hypersensitive response
GO:0010050 - vegetative phase change
GO:0048506 - regulation of timing of meristematic phase transition
GO:0009651 - response to salt stress
GO:0048366 - leaf development
GO:0009755 - hormone-mediated signaling
GO:0009736 - cytokinin mediated signaling
GO:0005982 - starch metabolic process
GO:0005634 - nucleus
GO:0048364 - root development
GO:0003677 - DNA binding
GO:0045449 - regulation of transcription
GO:0009740 - gibberellic acid mediated signaling
GO:0050832 - defense response to fungus
GO:0010229 - inflorescence development
GO:0010116 - positive regulation of abscisic acid biosynthetic process
GO:0010231 - maintenance of seed dormancy
GO:0048316 - seed development
|
TO:0000329 - tillering ability
TO:0000107 - endosperm storage protein-1 content
TO:0000346 - tiller number
TO:0000456 - spikelet number
TO:0000017 - anatomy and morphology related trait
TO:0002675 - gibberellic acid content
TO:0000396 - grain yield
TO:0000175 - bacterial blight disease resistance
TO:0000166 - gibberellic acid sensitivity
TO:0000109 - endosperm storage protein-2 content
TO:0000586 - seminal root length
TO:0000487 - endosperm color
TO:0000104 - floury endosperm
TO:0000222 - head rice
TO:0000303 - cold tolerance
TO:0000547 - primary branch number
TO:0000447 - filled grain number
TO:0002653 - endosperm storage protein content
TO:0000696 - starch content
TO:0000162 - seed quality
TO:0000266 - chalky endosperm
TO:0000340 - total soluble sugar content
TO:0006001 - salt tolerance
TO:0002637 - leaf size
TO:0000656 - root development trait
TO:0000227 - root length
TO:0000253 - seed dormancy
TO:0000179 - biotic stress trait
TO:0000619 - vivipary
TO:0000135 - leaf length
TO:0000357 - growth and development trait
TO:0000455 - seed set percent
TO:0000152 - panicle number
TO:0000011 - nitrogen sensitivity
TO:0002759 - grain number
TO:0000653 - seed development trait
TO:0000621 - inflorescence development trait
TO:0000074 - blast disease
TO:0002689 - leaf sheath length
TO:0002685 - crown root number
TO:0000050 - inflorescence branching
|
PO:0007520 - root development stage
PO:0001083 - inflorescence development stage
PO:0025034 - leaf
PO:0025487 - bract primordium
PO:0001170 - seed development stage
PO:0007057 - 0 seed germination stage
|
Os08g0509600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os08g39890.1
|
|
|
G1L1
|
OsG1L1
|
G1 LIKE PROTEIN 1
|
OsG1-like 1
|
2
|
Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Seed - Morphological traits - Grain shape
Reproductive organ - Inflorescence
Other
|
GO:0009416 - response to light stimulus
GO:0010229 - inflorescence development
GO:0009414 - response to water deprivation
GO:0009737 - response to abscisic acid stimulus
GO:0003677 - DNA binding
GO:0009299 - mRNA transcription
GO:0007275 - multicellular organismal development
GO:0006355 - regulation of transcription, DNA-dependent
GO:0005634 - nucleus
GO:0010228 - vegetative to reproductive phase transition
|
TO:0000641 - primary branch length
TO:0000040 - panicle length
TO:0000050 - inflorescence branching
TO:0000734 - grain length
TO:0000615 - abscisic acid sensitivity
TO:0000621 - inflorescence development trait
TO:0000276 - drought tolerance
TO:0000456 - spikelet number
TO:0000547 - primary branch number
TO:0006030 - spikelet meristem identity
TO:0000392 - sterility or fertility trait
TO:0000397 - grain size
|
PO:0009105 - inflorescence branch meristem
PO:0001083 - inflorescence development stage
PO:0006327 - spikelet meristem
PO:0001170 - seed development stage
PO:0009049 - inflorescence
PO:0020104 - leaf sheath
PO:0000230 - inflorescence meristem
|
Os02g0166800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g07030.3
LOC_Os02g07030.2
LOC_Os02g07030.1
|
|
|
G1L2
|
OsG1L2
|
G1 LIKE PROTEIN 2
|
OsG1-like 2
|
6
|
Seed - Morphological traits - Grain shape
Other
Tolerance and resistance - Stress tolerance
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Inflorescence
|
GO:0009414 - response to water deprivation
GO:0009416 - response to light stimulus
GO:0003677 - DNA binding
GO:0007275 - multicellular organismal development
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009299 - mRNA transcription
GO:0009737 - response to abscisic acid stimulus
GO:0005634 - nucleus
GO:0010228 - vegetative to reproductive phase transition
GO:0010229 - inflorescence development
|
TO:0000392 - sterility or fertility trait
TO:0000621 - inflorescence development trait
TO:0000050 - inflorescence branching
TO:0000456 - spikelet number
TO:0000276 - drought tolerance
TO:0006030 - spikelet meristem identity
TO:0000615 - abscisic acid sensitivity
TO:0000040 - panicle length
TO:0000557 - secondary branch number
TO:0000641 - primary branch length
TO:0000397 - grain size
TO:0000547 - primary branch number
|
PO:0005052 - plant callus
PO:0009105 - inflorescence branch meristem
PO:0009049 - inflorescence
PO:0001083 - inflorescence development stage
PO:0000230 - inflorescence meristem
PO:0020104 - leaf sheath
PO:0020148 - shoot apical meristem
PO:0006327 - spikelet meristem
PO:0009047 - stem
PO:0009005 - root
|
Os06g0672400
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g46030.1
|
|
|
G1L5
|
OsG1L5
TAW1
OsTAW1
|
G1 LIKE PROTEIN 5
|
TAWAWA1
|
10
|
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Inflorescence
Other
Tolerance and resistance - Stress tolerance
|
GO:0009416 - response to light stimulus
GO:0010228 - vegetative to reproductive phase transition
GO:0009737 - response to abscisic acid stimulus
GO:0009909 - regulation of flower development
GO:0010073 - meristem maintenance
GO:0003677 - DNA binding
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009299 - mRNA transcription
GO:0010077 - maintenance of inflorescence meristem identity
GO:0005634 - nucleus
GO:0007275 - multicellular organismal development
GO:0009414 - response to water deprivation
GO:0009742 - brassinosteroid mediated signaling
GO:0010229 - inflorescence development
|
TO:0000621 - inflorescence development trait
TO:0000373 - inflorescence anatomy and morphology trait
TO:0006017 - meristem identity
TO:0006030 - spikelet meristem identity
TO:0000615 - abscisic acid sensitivity
TO:0000276 - drought tolerance
TO:0002677 - brassinosteroid sensitivity
TO:0000622 - flower development trait
TO:0006031 - inflorescence size
|
PO:0009049 - inflorescence
PO:0007615 - flower development stage
PO:0001083 - inflorescence development stage
PO:0009005 - root
PO:0005052 - plant callus
PO:0020148 - shoot apical meristem
PO:0006327 - spikelet meristem
PO:0000230 - inflorescence meristem
|
Os10g0478000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os10g33780.1
|
|
|
EP3
|
EP3/LP
LP
OsLP
OsFbox076
OsFbox76
Os_F0106
OsEP3
OsFBK5
FBK5
|
ERECT PANICLE 3
|
LARGER PANICLE
F-box protein 76
F-box-type E3 ubiquitin ligase K5
|
2
|
Vegetative organ - Leaf
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
|
GO:0005737 - cytoplasm
GO:0009908 - flower development
GO:0010052 - guard cell differentiation
GO:0005634 - nucleus
GO:0009760 - C4 photosynthesis
GO:0010229 - inflorescence development
GO:0010118 - stomatal movement
GO:0048513 - organ development
GO:0048437 - floral organ development
GO:0048316 - seed development
|
TO:0000621 - inflorescence development trait
TO:0000357 - growth and development trait
TO:0002600 - flower organ size
TO:0006013 - carpel number
TO:0000531 - anther length
TO:0000370 - leaf width
TO:0000625 - spikelet density
TO:0000653 - seed development trait
TO:0002768 - spikelet length
TO:0000371 - yield trait
TO:0000564 - spikelet width
TO:0006038 - floral organ number
TO:0006022 - floral organ development trait
TO:0000050 - inflorescence branching
TO:0000396 - grain yield
TO:0002759 - grain number
TO:0000590 - grain weight
TO:0000207 - plant height
TO:0000269 - 100-seed weight
TO:0000622 - flower development trait
TO:0000734 - grain length
TO:0000447 - filled grain number
TO:0000040 - panicle length
TO:0000391 - seed size
TO:0006029 - glume number
TO:0000225 - stamen number
TO:0000421 - pollen fertility
TO:0000397 - grain size
TO:0000135 - leaf length
|
PO:0025178 - stem epidermis
PO:0006023 - bundle sheath
PO:0004010 - meristematic cell
PO:0009066 - anther
PO:0009072 - plant ovary
PO:0025281 - pollen
PO:0007615 - flower development stage
PO:0001083 - inflorescence development stage
PO:0001170 - seed development stage
PO:0025585 - floral organ formation stage
PO:0009005 - root
PO:0009047 - stem
PO:0025034 - leaf
PO:0009010 - seed
PO:0009046 - flower
PO:0020127 - primary root
PO:0009013 - portion of meristem tissue
PO:0020123 - root cap
PO:0006036 - root epidermis
|
Os02g0260200
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g15950.1
|
|
|
EP2(t)
|
Ep2(t)
|
ERECT PANICLE 2
|
|
4
|
Reproductive organ - Panicle, Mode of branching
|
|
|
|
-
|
|
|
|
PLA1
|
pla1
OsPLA1
plt1
CYP78A11
|
PLASTOCHRON 1
|
plastochron1
plastochron 1
plastochron-1
Cytochrome P450 78A11
Protein PLASTOCHRON1
|
10
|
Coloration - Anthocyanin
Vegetative organ - Leaf
Reproductive organ - panicle
Heterochrony
Reproductive organ - Panicle, Mode of branching
Seed - Morphological traits - Grain shape
Vegetative organ - Culm
|
GO:0010228 - vegetative to reproductive phase transition
GO:0010432 - bract development
GO:0051781 - positive regulation of cell division
GO:0055114 - oxidation reduction
GO:0004497 - monooxygenase activity
GO:0007275 - multicellular organismal development
GO:0009055 - electron carrier activity
GO:0010229 - inflorescence development
GO:0020037 - heme binding
GO:0048366 - leaf development
GO:0009740 - gibberellic acid mediated signaling
GO:0009739 - response to gibberellin stimulus
|
TO:0000050 - inflorescence branching
TO:0000621 - inflorescence development trait
TO:0000391 - seed size
TO:0000346 - tiller number
TO:0000207 - plant height
TO:0000369 - vegetative growth time
TO:0002638 - shoot meristem development
TO:0000659 - phyllochron
TO:0000730 - mitotic cell cycle trait
TO:0000166 - gibberellic acid sensitivity
|
PO:0020148 - shoot apical meristem
PO:0001083 - inflorescence development stage
PO:0020122 - inflorescence axis
|
Os10g0403000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os10g26340.1
|
image Id (
6707
)
|
|
LAX1
|
lax
lax(lx)
lx
OsbHLH123
bHLH123
OsLAX1
BOS1
OsBOS1
|
LAX PANICLE 1
|
lax panicle
Transcription factor LAX PANICLE
lax panicle1
basic helix-loop-helix protein 123
LAX PANICLE1
branch one seed 1
|
1
|
Vegetative organ - Culm
Reproductive organ - panicle
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Inflorescence
|
GO:0005634 - nucleus
GO:0045449 - regulation of transcription
GO:0005985 - sucrose metabolic process
GO:0005982 - starch metabolic process
GO:0010081 - regulation of inflorescence meristem growth
GO:0009753 - response to jasmonic acid stimulus
GO:0009741 - response to brassinosteroid stimulus
GO:0009737 - response to abscisic acid stimulus
GO:0009735 - response to cytokinin stimulus
GO:0010229 - inflorescence development
GO:0009733 - response to auxin stimulus
GO:0009734 - auxin mediated signaling pathway
GO:0009555 - pollen development
GO:0048497 - maintenance of floral organ identity
GO:0048444 - floral organ morphogenesis
GO:0048437 - floral organ development
GO:0003677 - DNA binding
GO:0006350 - transcription
GO:0030528 - transcription regulator activity
GO:0007275 - multicellular organismal development
|
TO:0000501 - spikelet weight
TO:0000436 - spikelet sterility
TO:0000440 - grain number per plant
TO:0000145 - internode length
TO:0000371 - yield trait
TO:0000621 - inflorescence development trait
TO:0002677 - brassinosteroid sensitivity
TO:0000615 - abscisic acid sensitivity
TO:0000172 - jasmonic acid sensitivity
TO:0000657 - spikelet anatomy and morphology trait
TO:0000050 - inflorescence branching
TO:0000089 - panicle type
TO:0001014 - leaf dry weight
TO:0000152 - panicle number
TO:0000625 - spikelet density
TO:0000447 - filled grain number
TO:0000622 - flower development trait
TO:0002600 - flower organ size
TO:0000455 - seed set percent
TO:0006022 - floral organ development trait
TO:0000137 - days to heading
TO:0000449 - grain yield per plant
TO:0000207 - plant height
TO:0000590 - grain weight
TO:0000547 - primary branch number
TO:0000456 - spikelet number
TO:0000382 - 1000-seed weight
TO:0000180 - spikelet fertility
TO:0000734 - grain length
TO:0000053 - pollen sterility
TO:0000240 - sterile lemma length
TO:0000397 - grain size
TO:0000040 - panicle length
TO:0000399 - grain thickness
TO:0000163 - auxin sensitivity
TO:0000557 - secondary branch number
TO:0000167 - cytokinin sensitivity
TO:0002759 - grain number
|
PO:0007615 - flower development stage
PO:0009037 - lemma
PO:0009049 - inflorescence
PO:0009038 - palea
PO:0001048 - palea development stage
PO:0001007 - pollen development stage
PO:0020142 - stem internode
PO:0009051 - spikelet
PO:0009029 - stamen
PO:0001083 - inflorescence development stage
PO:0009040 - sterile lemma
|
Os01g0831000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g61480.1
|
image Id (
6720
)
|
|
FC1
|
fc1
OsTB1
tb1
OsTB1/FC1
Os TB1
TB1
OsFC1
MP3
OsMP3
|
FINE CULM 1
|
fine culm1
fine culm 1
fine culm-1
lateral branching-1(t)
teosinte-branching 1
Fine culm 1
teosinte branched1 protein
teosinte branched 1 protein
transcription factor OsTB1
teosinte branched1
FINE CULM1
MORE PANICLES 3
|
3
|
Tolerance and resistance - Stress tolerance
Reproductive organ - Panicle, Mode of branching
Vegetative organ - Culm
Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
Character as QTL - Yield and productivity
|
GO:0007049 - cell cycle
GO:0030528 - transcription regulator activity
GO:0048831 - regulation of shoot development
GO:0009735 - response to cytokinin stimulus
GO:0007275 - multicellular organismal development
GO:0009733 - response to auxin stimulus
GO:0009741 - response to brassinosteroid stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0010229 - inflorescence development
GO:0010182 - sugar mediated signaling
GO:0009744 - response to sucrose stimulus
GO:0043565 - sequence-specific DNA binding
GO:0005634 - nucleus
GO:0009725 - response to hormone stimulus
GO:0007623 - circadian rhythm
|
TO:0000027 - culm number
TO:0006005 - fructose content
TO:0002639 - shoot branching
TO:0000329 - tillering ability
TO:0000300 - glucose content
TO:0000152 - panicle number
TO:0000401 - plant growth hormone sensitivity
TO:0000661 - tiller bud dormancy
TO:0000328 - sucrose content
TO:0000207 - plant height
TO:0000333 - sugar content
TO:0000456 - spikelet number
TO:0000396 - grain yield
TO:0000051 - stem strength
TO:0000576 - stem length
TO:0000153 - relative yield
TO:0006032 - panicle size
TO:0000346 - tiller number
TO:0000163 - auxin sensitivity
TO:0000011 - nitrogen sensitivity
TO:0000167 - cytokinin sensitivity
TO:0000621 - inflorescence development trait
TO:0000068 - lodging incidence
TO:0000339 - stem thickness
|
PO:0001083 - inflorescence development stage
PO:0007041 - inflorescence emergence stage
PO:0006343 - axillary shoot system
PO:0000055 - bud
PO:0009047 - stem
PO:0025034 - leaf
PO:0004709 - axillary bud
PO:0020148 - shoot apical meristem
|
Os03g0706500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os03g49880.1
|
image Id (
6745
)
|
|
D11
|
d11(d8)
dwf10
d8
D11/CYP724B1
d11
CYP724B1
GNS4
OsD11
PMM1
OsPMM1
PMM1/D11
NBG4
OsCPB1
CPB1
CPB1/D11
|
DWARF SHINKANEAIKOKU OR NOHRIN 28
|
shinkaneaikoku or nohrin 28 dwarf
DWARF SHINKANEAIKOKU OR NOHRIN 28
OsDWARF11
dwarf-11
Cytochrome P450 724B1
Dwarf protein 11
cytochrome P450 CYP724B1
DWARF11
grain number and size on chromosome 4
Panicle Morphology Mutant 1
Notched Belly Grain 4
CLUSTERED PRIMARY BRANCH 1
|
4
|
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Inflorescence
Vegetative organ - Culm
Seed - Morphological traits
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Taste
Reproductive organ - Heading date
Vegetative organ - Leaf
Character as QTL - Yield and productivity
Seed - Morphological traits - Grain shape
|
GO:0009055 - electron carrier activity
GO:0004497 - monooxygenase activity
GO:0016021 - integral to membrane
GO:0008199 - ferric iron binding
GO:0007275 - multicellular organismal development
GO:0006879 - cellular iron ion homeostasis
GO:0016020 - membrane
GO:0016023 - cytoplasmic membrane-bounded vesicle
GO:0016132 - brassinosteroid biosynthetic process
GO:0009742 - brassinosteroid mediated signaling
GO:0009414 - response to water deprivation
GO:0051607 - defense response to virus
GO:0006826 - iron ion transport
GO:0009741 - response to brassinosteroid stimulus
GO:0055114 - oxidation reduction
GO:0022900 - electron transport chain
GO:0009826 - unidimensional cell growth
GO:0009647 - skotomorphogenesis
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 - heme binding
GO:0009753 - response to jasmonic acid stimulus
GO:0051512 - positive regulation of unidimensional cell growth
GO:0010029 - regulation of seed germination
GO:0048573 - photoperiodism, flowering
|
TO:0000391 - seed size
TO:0000040 - panicle length
TO:0000592 - 1000-dehulled grain weight
TO:0000139 - grains per panicle
TO:0000346 - tiller number
TO:0000329 - tillering ability
TO:0000180 - spikelet fertility
TO:0000397 - grain size
TO:0000206 - leaf angle
TO:0000657 - spikelet anatomy and morphology trait
TO:0000172 - jasmonic acid sensitivity
TO:0002677 - brassinosteroid sensitivity
TO:0000576 - stem length
TO:0000547 - primary branch number
TO:0000050 - inflorescence branching
TO:0000501 - spikelet weight
TO:0000557 - secondary branch number
TO:0006032 - panicle size
TO:0000641 - primary branch length
TO:0002730 - grain shape
TO:0000567 - tiller angle
TO:0002688 - leaf lamina joint bending
TO:0000137 - days to heading
TO:0000402 - grain width
TO:0000145 - internode length
TO:0002616 - flowering time
TO:0000052 - primary branching of inflorescence
TO:0000371 - yield trait
TO:0000020 - black streak dwarf virus resistance
TO:0000207 - plant height
TO:0002759 - grain number
TO:0000484 - seed shape
TO:0000456 - spikelet number
TO:0000276 - drought tolerance
TO:0002676 - brassinosteroid content
TO:0000396 - grain yield
TO:0000455 - seed set percent
|
PO:0006321 - primary inflorescence branch
PO:0020122 - inflorescence axis
PO:0009010 - seed
PO:0020142 - stem internode
PO:0009049 - inflorescence
PO:0009047 - stem
|
Os04g0469800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g39430.1
LOC_Os04g39430.2
|
image Id (
6753
)
|
|
NAL2
|
nal2
nal3
cul2
OsWOX3A
WOX3A
Os NS
NS
OsNS
OsWOX3
OsNS1/OsNS2
OsPRS
|
NARROW LEAF 2
|
narrow leaf2
narrow leaf 2
narrow leaf-2
curl leaf-2
WUSCHEL related homeobox 3A
WUSCHEL-related homeobox 3A
|
11
|
Vegetative organ - Leaf
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Vegetative organ - Root
Seed - Morphological traits - Grain shape
|
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0006351 - transcription, DNA-dependent
GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0009739 - response to gibberellin stimulus
GO:0010336 - gibberellic acid homeostasis
GO:0010373 - negative regulation of gibberellin biosynthetic process
GO:0007275 - multicellular organismal development
GO:0009734 - auxin mediated signaling pathway
GO:0009740 - gibberellic acid mediated signaling
GO:0043565 - sequence-specific DNA binding
GO:0048364 - root development
|
TO:0000657 - spikelet anatomy and morphology trait
TO:0000370 - leaf width
TO:0000492 - leaf shape
TO:0000402 - grain width
TO:0000276 - drought tolerance
TO:0006001 - salt tolerance
TO:0000346 - tiller number
TO:0001013 - lateral root number
TO:0000207 - plant height
TO:0000166 - gibberellic acid sensitivity
TO:0002675 - gibberellic acid content
TO:0000656 - root development trait
|
PO:0007520 - root development stage
PO:0009025 - vascular leaf
|
Os11g0102100
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os11g01130.1
LOC_Os11g01130.2
|
|
|
NAL3
|
nal3(nal2)
nal2
nal3
cul3
OsWOX3A
WOX3A
WOX3
OsWOX3
OsNS
OsNS1/OsNS2
OsPRS
|
NARROW LEAF 3
|
narrow leaf3
narrow leaf 3
narrow leaf-3
curl leaf-3
WUSCHEL related homeobox 3A
WUSCHEL-related homeobox 3
WUSCHEL-related homeobox 3A
|
12
|
Vegetative organ - Leaf
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Vegetative organ - Root
Seed - Morphological traits - Grain shape
|
GO:0043565 - sequence-specific DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0009739 - response to gibberellin stimulus
GO:0010336 - gibberellic acid homeostasis
GO:0010373 - negative regulation of gibberellin biosynthetic process
GO:0048366 - leaf development
GO:0007275 - multicellular organismal development
GO:0006351 - transcription, DNA-dependent
|
TO:0000492 - leaf shape
TO:0000149 - seed width
TO:0000276 - drought tolerance
TO:0000657 - spikelet anatomy and morphology trait
TO:0000402 - grain width
TO:0000346 - tiller number
TO:0000370 - leaf width
TO:0001013 - lateral root number
TO:0002675 - gibberellic acid content
TO:0006001 - salt tolerance
TO:0000166 - gibberellic acid sensitivity
TO:0000655 - leaf development trait
TO:0000656 - root development trait
|
PO:0009025 - vascular leaf
PO:0001050 - leaf development stage
|
Os12g0101600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os12g01120.1
|
|
|
MOC1
|
moc1
OsMOC1
OsGRAS-33
OsGRAS33
GRAS-33
GRAS33
GNP6
OsGNP6
|
MONOCULM 1
|
monoculm1
Monoculm 1
Protein MONOCULM 1
GRAS protein 33
Grain Number Per-panicle on chromosome 6
|
6
|
Vegetative organ - Root
Reproductive organ - panicle
Vegetative organ - Culm
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
|
GO:0006350 - transcription
GO:0010014 - meristem initiation
GO:0030528 - transcription regulator activity
GO:0048507 - meristem development
GO:0010081 - regulation of inflorescence meristem growth
GO:0009877 - nodulation
GO:0045449 - regulation of transcription
GO:0010229 - inflorescence development
GO:0009739 - response to gibberellin stimulus
GO:0009738 - abscisic acid mediated signaling
GO:0009740 - gibberellic acid mediated signaling
GO:0009737 - response to abscisic acid stimulus
GO:0010075 - regulation of meristem growth
GO:0048364 - root development
GO:0005634 - nucleus
|
TO:0000329 - tillering ability
TO:0000152 - panicle number
TO:0000621 - inflorescence development trait
TO:0000011 - nitrogen sensitivity
TO:0000166 - gibberellic acid sensitivity
TO:0006016 - meristem tissue development trait
TO:0000656 - root development trait
TO:0000456 - spikelet number
TO:0000547 - primary branch number
TO:0000615 - abscisic acid sensitivity
TO:0000050 - inflorescence branching
TO:0000346 - tiller number
TO:0000501 - spikelet weight
TO:0000207 - plant height
|
PO:0004709 - axillary bud
PO:0007520 - root development stage
PO:0008039 - stem base
PO:0005001 - basal axillary shoot system
PO:0006343 - axillary shoot system
PO:0000232 - axillary bud meristem
PO:0001083 - inflorescence development stage
|
Os06g0610350
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g40780.1
|
|
|
GA2OX1
|
OsGA2ox1
ga2ox-1
OsGA2ox-1
ga2ox
ga2ox 1
GA2ox1
|
GIBBERELLIN 2-OXIDASE 1
|
rice GA 2-oxidase1
GA 2-oxidase 1
Gibberellin 2-oxidase 1
|
5
|
Biochemical character
Vegetative organ - Culm
Character as QTL - Yield and productivity
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Reproductive organ - Panicle, Mode of branching
|
GO:0009739 - response to gibberellin stimulus
GO:0009651 - response to salt stress
GO:0017000 - antibiotic biosynthetic process
GO:0016216 - isopenicillin-N synthase activity
GO:0005506 - iron ion binding
GO:0048573 - photoperiodism, flowering
GO:0009685 - gibberellin metabolic process
GO:0009725 - response to hormone stimulus
GO:0009409 - response to cold
|
TO:0002759 - grain number
TO:0000166 - gibberellic acid sensitivity
TO:0006001 - salt tolerance
TO:0000401 - plant growth hormone sensitivity
TO:0000303 - cold tolerance
TO:0000207 - plant height
TO:0000557 - secondary branch number
TO:0000547 - primary branch number
TO:0000447 - filled grain number
TO:0002675 - gibberellic acid content
TO:0002616 - flowering time
TO:0000137 - days to heading
|
|
Os05g0158600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os05g06670.1
|
|
|
BRD2
|
OsBRD2
Dim/dwf1
Dim
dwf1
OsDWF1
DWF1
LTBSG1
OsLTBSG1
LHDD10
OsLHDD10
OsD-LDH3
D-LDH3
|
BRASSINOSTEROID DEFICIENT DWARF 2
|
brassinosteroid (BR)-deficient dwarf-2
BR-deficient dwarf2
brassinosteroid-deficient dwarf2
rice homolog of Arabidopsis thaliana DIMINUTO/DWARF1
Dim/dwf1 protein
DIMINUTO
DWARF1
Putative Cell elongation protein DIMINUTO
Cell elongation protein Dwarf1
Dimunito/Dwarf1
longer top branch and shorter grain 1
D-lactate dehydrogenase 3
|
10
|
Reproductive organ - Panicle, Mode of branching
Character as QTL - Yield and productivity
Vegetative organ - Leaf
Biochemical character
Vegetative organ - Culm
Reproductive organ - Heading date
Coloration - Chlorophyll
Seed - Morphological traits - Grain shape
|
GO:0050614 - delta24-sterol reductase activity
GO:0050660 - FAD binding
GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity
GO:0006084 - acetyl-CoA metabolic process
GO:0048653 - anther development
GO:0043481 - anthocyanin accumulation in tissues in response to UV light
GO:0009741 - response to brassinosteroid stimulus
GO:0009664 - plant-type cell wall organization
GO:0000271 - polysaccharide biosynthetic process
GO:0000272 - polysaccharide catabolic process
GO:0010075 - regulation of meristem growth
GO:0048767 - root hair elongation
GO:0009834 - secondary cell wall biogenesis
GO:0007275 - multicellular organismal development
GO:0009826 - unidimensional cell growth
GO:0010229 - inflorescence development
GO:0010154 - fruit development
GO:0005634 - nucleus
GO:0009825 - multidimensional cell growth
GO:0009808 - lignin metabolic process
GO:0019344 - cysteine biosynthetic process
GO:0009932 - cell tip growth
GO:0005783 - endoplasmic reticulum
GO:0009507 - chloroplast
GO:0016126 - sterol biosynthetic process
GO:0005982 - starch metabolic process
GO:0048586 - regulation of long-day photoperiodism, flowering
GO:0048587 - regulation of short-day photoperiodism, flowering
GO:0005886 - plasma membrane
GO:0016021 - integral to membrane
GO:0016132 - brassinosteroid biosynthetic process
|
TO:0000621 - inflorescence development trait
TO:0002688 - leaf lamina joint bending
TO:0000207 - plant height
TO:0000734 - grain length
TO:0000180 - spikelet fertility
TO:0000382 - 1000-seed weight
TO:0000137 - days to heading
TO:0000495 - chlorophyll content
TO:0000326 - leaf color
TO:0000357 - growth and development trait
TO:0000397 - grain size
TO:0002676 - brassinosteroid content
TO:0002677 - brassinosteroid sensitivity
|
PO:0001083 - inflorescence development stage
PO:0000037 - shoot apex
PO:0001002 - fruit development stage
|
Os10g0397400
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os10g25780.3
LOC_Os10g25780.2
LOC_Os10g25780.1
|
|
|
GN1A
|
Gn1a
OsCKX2
CKX2
ckx2
Gn1a/OsCKX2
Os CKX2
CKX2/Gn1a
|
GRAIN NUMBER 1A
|
Cytokinin oxidase/dehydrogenase 2
grain number 1a
cytokinin oxidase 2
Grain number 1a/Cytokinin oxidase 2
Grain number 1 a
|
1
|
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Culm
Biochemical character
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Reproductive organ - Inflorescence
|
GO:0042594 - response to starvation
GO:0010229 - inflorescence development
GO:0016023 - cytoplasmic membrane-bounded vesicle
GO:0019139 - cytokinin dehydrogenase activity
GO:0032940 - secretion by cell
GO:0022900 - electron transport chain
GO:0009823 - cytokinin catabolic process
GO:0048281 - inflorescence morphogenesis
GO:0009651 - response to salt stress
GO:0009735 - response to cytokinin stimulus
|
TO:0000167 - cytokinin sensitivity
TO:0000557 - secondary branch number
TO:0002759 - grain number
TO:0000621 - inflorescence development trait
TO:0002660 - cytokinin content
TO:0000401 - plant growth hormone sensitivity
TO:0000207 - plant height
TO:0000040 - panicle length
TO:0000547 - primary branch number
TO:0000142 - secondary branching of inflorescence
TO:0000467 - cell membrane stability
TO:0006001 - salt tolerance
TO:0000440 - grain number per plant
TO:0000136 - relative water content
TO:0000296 - vegetative vigor
TO:0000316 - photosynthetic ability
TO:0000128 - harvest index
TO:0000396 - grain yield
TO:0000495 - chlorophyll content
TO:0000050 - inflorescence branching
TO:0000382 - 1000-seed weight
TO:0000346 - tiller number
TO:0000152 - panicle number
TO:0000590 - grain weight
TO:0000496 - carotenoid content
TO:0000456 - spikelet number
TO:0000052 - primary branching of inflorescence
TO:0000919 - grain weight
TO:0000397 - grain size
|
PO:0001083 - inflorescence development stage
PO:0000230 - inflorescence meristem
PO:0009030 - carpel
|
Os01g0197700
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g10110.1
|
|
|
DSG1
|
OsMAPK6
MAPK6
OsMPK6
MPK6
OsSIPK
SIPK
OsMAPK1
MAPK1
MPK1
OsMPK1
MPK6
OsDSG1
|
DWARF AND SMALL GRAIN 1
|
Mitogen-activated protein kinase 1
MAP kinase 1
MAP kinase 6
dwarf and small grain1
|
6
|
Vegetative organ - Leaf
Tolerance and resistance - Insect resistance
Vegetative organ - Root
Character as QTL - Plant growth activity
Character as QTL - Yield and productivity
Tolerance and resistance - Stress tolerance
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Grain shape
Biochemical character
|
GO:0009864 - induced systemic resistance, jasmonic acid mediated signaling pathway
GO:2000037 - regulation of stomatal complex patterning
GO:0009524 - phragmoplast
GO:0009814 - defense response, incompatible interaction
GO:0051301 - cell division
GO:0010200 - response to chitin
GO:0009733 - response to auxin stimulus
GO:0009734 - auxin mediated signaling pathway
GO:0009735 - response to cytokinin stimulus
GO:0009751 - response to salicylic acid stimulus
GO:0048364 - root development
GO:0009574 - preprophase band
GO:0009737 - response to abscisic acid stimulus
GO:0009723 - response to ethylene stimulus
GO:0009651 - response to salt stress
GO:0006952 - defense response
GO:0080136 - priming of cellular response to stress
GO:0009611 - response to wounding
GO:0009738 - abscisic acid mediated signaling
GO:0042127 - regulation of cell proliferation
GO:0009742 - brassinosteroid mediated signaling
GO:0005737 - cytoplasm
GO:0002238 - response to molecule of fungal origin
GO:0009690 - cytokinin metabolic process
GO:0005524 - ATP binding
GO:0009863 - salicylic acid mediated signaling pathway
GO:0002237 - response to molecule of bacterial origin
GO:0048481 - ovule development
GO:0009617 - response to bacterium
GO:0051726 - regulation of cell cycle
GO:0010446 - response to alkalinity
GO:0009716 - flavonoid phytoalexin biosynthetic process
GO:0005634 - nucleus
GO:0055078 - sodium ion homeostasis
GO:0010120 - camalexin biosynthetic process
GO:0005802 - trans-Golgi network
GO:0006468 - protein amino acid phosphorylation
GO:0006979 - response to oxidative stress
GO:0055075 - potassium ion homeostasis
GO:0052319 - regulation of phytoalexin biosynthetic process
GO:0004707 - MAP kinase activity
GO:0051302 - regulation of cell division
GO:2000038 - regulation of stomatal complex development
GO:0010422 - regulation of brassinosteroid biosynthetic process
GO:0009753 - response to jasmonic acid stimulus
GO:0010229 - inflorescence development
GO:0002221 - pattern recognition receptor signaling pathway
GO:0010268 - brassinosteroid homeostasis
GO:0080027 - response to herbivore
GO:0009409 - response to cold
GO:0009620 - response to fungus
GO:0009414 - response to water deprivation
GO:0042742 - defense response to bacterium
GO:0009826 - unidimensional cell growth
GO:0009741 - response to brassinosteroid stimulus
GO:0009867 - jasmonic acid mediated signaling pathway
GO:0009790 - embryonic development
GO:0050832 - defense response to fungus
GO:0042542 - response to hydrogen peroxide
GO:0002213 - defense response to insect
GO:0045595 - regulation of cell differentiation
GO:0043068 - positive regulation of programmed cell death
GO:0000165 - MAPKKK cascade
|
TO:0000357 - growth and development trait
TO:0000129 - false smut disease resistance
TO:0000439 - fungal disease resistance
TO:0000124 - flag leaf angle
TO:0000615 - abscisic acid sensitivity
TO:0000402 - grain width
TO:0000172 - jasmonic acid sensitivity
TO:0000206 - leaf angle
TO:0000303 - cold tolerance
TO:0000447 - filled grain number
TO:0002688 - leaf lamina joint bending
TO:0002668 - jasmonic acid content
TO:0006032 - panicle size
TO:0002660 - cytokinin content
TO:0002759 - grain number
TO:0000457 - total biomass yield
TO:0000203 - bacterial leaf streak disease resistance
TO:0000175 - bacterial blight disease resistance
TO:0002667 - abscisic acid content
TO:0002657 - oxidative stress
TO:0002677 - brassinosteroid sensitivity
TO:0002676 - brassinosteroid content
TO:0000454 - stem borer resistance
TO:0000276 - drought tolerance
TO:0000621 - inflorescence development trait
TO:0000163 - auxin sensitivity
TO:0000656 - root development trait
TO:0000397 - grain size
TO:0000481 - alkali sensitivity
TO:0000273 - armyworm resistance
TO:0000456 - spikelet number
TO:0000525 - sodium to potassium content ratio
TO:0000167 - cytokinin sensitivity
TO:0000608 - sodium content
TO:0000074 - blast disease
TO:0000590 - grain weight
TO:0002730 - grain shape
TO:0002669 - diterpenoid phytoalexin content
TO:0000609 - potassium content
TO:0000391 - seed size
TO:0006001 - salt tolerance
TO:0000396 - grain yield
|
PO:0009051 - spikelet
PO:0007520 - root development stage
PO:0001083 - inflorescence development stage
|
Os06g0154500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g06090.1
LOC_Os06g06090.2
|
|
|
RCN2
|
Rcn2
OsRCN2
|
RICE TERMINAL FLOWER 1/CENTRORADIALIS HOMOLOG 2
|
RICE CENTRORADIALIS 2
|
2
|
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Heading date
|
GO:0009416 - response to light stimulus
GO:0009753 - response to jasmonic acid stimulus
GO:0009737 - response to abscisic acid stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0008429 - phosphatidylethanolamine binding
GO:0010229 - inflorescence development
GO:0048510 - regulation of timing of transition from vegetative to reproductive phase
|
TO:0000172 - jasmonic acid sensitivity
TO:0000557 - secondary branch number
TO:0000674 - phytochemical compound content
TO:0000615 - abscisic acid sensitivity
TO:0002759 - grain number
TO:0000630 - pedicel length
TO:0000075 - light sensitivity
TO:0000675 - ferulic acid content
TO:0000137 - days to heading
|
PO:0000230 - inflorescence meristem
PO:0020148 - shoot apical meristem
PO:0020104 - leaf sheath
PO:0006321 - primary inflorescence branch
PO:0006322 - second order inflorescence branch
PO:0009005 - root
PO:0009025 - vascular leaf
PO:0009049 - inflorescence
PO:0020039 - leaf lamina
|
Os02g0531600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g32950.1
|
|
|
LOG1
|
OsLOG1
LOG
Log
log
OsLOG
|
LONELY GUY 1
|
LONELY GUY
Lonely Guy
lonely guy
Protein LONELY GUY
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
|
1
|
Reproductive organ - Panicle, Mode of branching
Seed - Morphological traits - Grain shape
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Character as QTL - Yield and productivity
Vegetative organ - Shoot apical meristem(SAM)
|
GO:0010073 - meristem maintenance
GO:0009736 - cytokinin mediated signaling
GO:0048608 - reproductive structure development
GO:0009536 - plastid
GO:0009691 - cytokinin biosynthetic process
GO:0010076 - maintenance of floral meristem identity
GO:0010077 - maintenance of inflorescence meristem identity
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds
GO:0010083 - regulation of vegetative meristem growth
GO:0048832 - specification of organ number
GO:0048509 - regulation of meristem development
GO:0010074 - maintenance of meristem identity
|
TO:0000040 - panicle length
TO:0000590 - grain weight
TO:0002660 - cytokinin content
TO:0000919 - grain weight
TO:0002759 - grain number
TO:0002659 - pistil number
TO:0000089 - panicle type
TO:0006022 - floral organ development trait
TO:0000447 - filled grain number
TO:0006032 - panicle size
TO:0000017 - anatomy and morphology related trait
TO:0000050 - inflorescence branching
|
PO:0000230 - inflorescence meristem
PO:0000229 - flower meristem
PO:0025530 - reproductive shoot system development stage
PO:0009105 - inflorescence branch meristem
|
Os01g0588900
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g40630.1
LOC_Os01g40630.2
LOC_Os01g40630.3
|
|
|
SH5
|
OsSH5
RI
SH5/RI
OsRI
VPB1
OsVPB1
OsBLH9
BLH9
|
SHATTERING 5
|
Shattering-5
erticillate rachis
verticillate primary branch 1
BEL1-like homeodomain protein 9
|
5
|
Reproductive organ - Inflorescence
Reproductive organ - Panicle, Mode of branching
Seed - Physiological traits - Shattering
Character as QTL - Yield and productivity
|
GO:0006355 - regulation of transcription, DNA-dependent
GO:0005634 - nucleus
GO:0009809 - lignin biosynthetic process
GO:0010432 - bract development
GO:0003677 - DNA binding
GO:0010073 - meristem maintenance
GO:0010492 - maintenance of shoot apical meristem identity
GO:0080006 - internode patterning
GO:0010081 - regulation of inflorescence meristem growth
GO:0010065 - primary meristem tissue development
GO:0010229 - inflorescence development
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0048507 - meristem development
GO:0010014 - meristem initiation
GO:0009755 - hormone-mediated signaling
GO:0010077 - maintenance of inflorescence meristem identity
|
TO:0000557 - secondary branch number
TO:0006014 - phyllotaxy
TO:0000142 - secondary branching of inflorescence
TO:0000733 - lignin biosynthesis trait
TO:0000547 - primary branch number
TO:0000396 - grain yield
TO:0006020 - shoot apical meristem development
TO:0000621 - inflorescence development trait
TO:0000373 - inflorescence anatomy and morphology trait
TO:0000473 - grain shattering
TO:0000052 - primary branching of inflorescence
TO:0002759 - grain number
TO:0000456 - spikelet number
|
PO:0001083 - inflorescence development stage
PO:0000230 - inflorescence meristem
PO:0020148 - shoot apical meristem
PO:0009010 - seed
PO:0009047 - stem
PO:0006327 - spikelet meristem
PO:0009005 - root
PO:0020104 - leaf sheath
PO:0025034 - leaf
PO:0009049 - inflorescence
|
Os05g0455200
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os05g38120.1
|
|
|
SPL4
|
OsSPL4
|
RICE SQUAMOSA PROMOTER-BINDING-LIKE 4
|
Squamosa promoter-binding-like protein 4
|
2
|
Other
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
|
GO:0045449 - regulation of transcription
GO:0008270 - zinc ion binding
GO:0006350 - transcription
GO:0003677 - DNA binding
GO:0050832 - defense response to fungus
GO:0048316 - seed development
GO:0005634 - nucleus
GO:0051302 - regulation of cell division
GO:0010229 - inflorescence development
|
TO:0000399 - grain thickness
TO:0000396 - grain yield
TO:0000397 - grain size
TO:0000653 - seed development trait
TO:0000590 - grain weight
TO:0000557 - secondary branch number
TO:0000547 - primary branch number
TO:0000455 - seed set percent
TO:0000456 - spikelet number
TO:0000734 - grain length
TO:0000074 - blast disease
TO:0000382 - 1000-seed weight
TO:0000052 - primary branching of inflorescence
TO:0000605 - hydrogen peroxide content
TO:0000612 - seed density
TO:0000142 - secondary branching of inflorescence
TO:0000050 - inflorescence branching
TO:0000621 - inflorescence development trait
TO:0002759 - grain number
TO:0000449 - grain yield per plant
TO:0000447 - filled grain number
|
PO:0001083 - inflorescence development stage
PO:0001170 - seed development stage
|
Os02g0174100
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g07780.1
LOC_Os02g07780.2
|
|
|
SPL7
|
OsSPL7
|
RICE SQUAMOSA PROMOTER-BINDING-LIKE 7
|
Squamosa promoter-binding-like protein 7
|
4
|
Other
Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
Vegetative organ - Culm
Character as QTL - Yield and productivity
Vegetative organ - Leaf
|
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0010229 - inflorescence development
GO:0048506 - regulation of timing of meristematic phase transition
GO:0045449 - regulation of transcription
GO:0008270 - zinc ion binding
GO:0009740 - gibberellic acid mediated signaling
GO:0042742 - defense response to bacterium
|
TO:0000166 - gibberellic acid sensitivity
TO:0000621 - inflorescence development trait
TO:0000207 - plant height
TO:0000050 - inflorescence branching
TO:0000134 - alkali digestion
TO:0000196 - amylose content
TO:0000162 - seed quality
TO:0000175 - bacterial blight disease resistance
TO:0000346 - tiller number
TO:0000329 - tillering ability
TO:0002637 - leaf size
TO:0000371 - yield trait
|
PO:0001083 - inflorescence development stage
PO:0009089 - endosperm
PO:0007633 - endosperm development stage
PO:0025034 - leaf
PO:0025487 - bract primordium
|
Os04g0551500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g46580.1
|
|
|
DEP2
|
|
DENSE AND ERECT PANICLE 2
|
|
|
Reproductive organ - Panicle, Mode of branching
|
|
|
|
-
|
|
|
|
DEP3
|
dep3
OspPLAIIIdelta
pPLAIIIdelta
|
DENSE AND ERECT PANICLE 3
|
dense and erect panicle 3
Patatin-related phospholipase A III delta
|
6
|
Reproductive organ - Panicle, Mode of branching
Character as QTL - Yield and productivity
Seed - Morphological traits - Grain shape
|
GO:0016787 - hydrolase activity
GO:0006629 - lipid metabolic process
|
TO:0000396 - grain yield
TO:0000734 - grain length
TO:0002759 - grain number
TO:0000050 - inflorescence branching
TO:0000397 - grain size
|
|
Os06g0677000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g46350.1
|
|
|
BZIP46
|
ABL1
bZIP46
OsABL1
OsbZIP46
OsAREB8
OsABF2
ABF2
OsABF3
ABF3
OsbZIP46CA1
OsZIP46
ZIP46
OsbZIP46/OsABF2
AREB1
OsAREB1
|
b-ZIP TRANSCRIPTION FACTOR 46
|
ABI5-like1
bZIP transcription factor 46
AREB/ABF-family transcription factor OsAREB8
AREB/ABF-family protein 8
ABA-responsive element binding factor 2
abscisic acid responsive element-binding factor 1
|
6
|
Other
Reproductive organ - Panicle, Mode of branching
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
|
GO:0010119 - regulation of stomatal movement
GO:0080050 - regulation of seed development
GO:0050848 - regulation of calcium-mediated signaling
GO:0005634 - nucleus
GO:0003700 - transcription factor activity
GO:0070509 - calcium ion import
GO:0010447 - response to acidity
GO:0009414 - response to water deprivation
GO:0009409 - response to cold
GO:0046983 - protein dimerization activity
GO:0043565 - sequence-specific DNA binding
GO:0009789 - positive regulation of abscisic acid mediated signaling
GO:0009753 - response to jasmonic acid stimulus
GO:0009737 - response to abscisic acid stimulus
GO:0030104 - water homeostasis
|
TO:0000136 - relative water content
TO:0000178 - acid soil sensitivity
TO:0000276 - drought tolerance
TO:0000188 - drought sensitivity
TO:0000557 - secondary branch number
TO:0000547 - primary branch number
TO:0000382 - 1000-seed weight
TO:0000919 - grain weight
TO:0000590 - grain weight
TO:0000520 - stomatal closure rate
TO:0000522 - stomatal conductance
TO:0000397 - grain size
TO:0000653 - seed development trait
TO:0000429 - salt sensitivity
TO:0000172 - jasmonic acid sensitivity
TO:0000303 - cold tolerance
TO:0000615 - abscisic acid sensitivity
TO:0000432 - temperature response trait
|
PO:0001170 - seed development stage
PO:0009010 - seed
|
Os06g0211200
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g10880.1
LOC_Os06g10880.2
LOC_Os06g10880.3
|
|
|
ASP1
|
OsLIS-L1
OsWD40-155
ASP1
TPR2
OsTPR2
OsREL2
REL2
OsTPL3
TPL3
OsTPL2
TPL2
ASP-LSL
OsTPR1
TPR1
|
ABERRANT SPIKELET AND PANICLE 1
|
Lissencephaly type-1-like 1
ABERRANT SPIKELET AND PANICLE1
TOPLESS-RELATED PROTEIN 2
TOPLESS 3
aberrant spikelet-long sterile lemma
ROMOSA ENHANCER LOCI2
|
8
|
Reproductive organ - Panicle, Mode of branching
Character as QTL - Yield and productivity
Tolerance and resistance - Insect resistance
Tolerance and resistance - Stress tolerance
Vegetative organ - Culm
Vegetative organ - Leaf
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Grain shape
|
GO:0010025 - wax biosynthetic process
GO:0048366 - leaf development
GO:0010072 - primary shoot apical meristem specification
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0019827 - stem cell maintenance
GO:0010229 - inflorescence development
GO:0003714 - transcription corepressor activity
GO:0010073 - meristem maintenance
GO:0005634 - nucleus
GO:0001558 - regulation of cell growth
GO:0009734 - auxin mediated signaling pathway
GO:0009414 - response to water deprivation
GO:0002213 - defense response to insect
|
TO:0000371 - yield trait
TO:0000152 - panicle number
TO:0000276 - drought tolerance
TO:0000424 - brown planthopper resistance
TO:0000655 - leaf development trait
TO:0000050 - inflorescence branching
TO:0000621 - inflorescence development trait
TO:0000397 - grain size
TO:0000590 - grain weight
TO:0000402 - grain width
TO:0000650 - lemma length
TO:0000145 - internode length
TO:0000430 - germination rate
TO:0000345 - seed viability
TO:0000040 - panicle length
TO:0000207 - plant height
TO:0000240 - sterile lemma length
TO:0000163 - auxin sensitivity
TO:0000329 - tillering ability
TO:0000346 - tiller number
TO:0000592 - 1000-dehulled grain weight
TO:0000455 - seed set percent
TO:0002768 - spikelet length
TO:0000734 - grain length
TO:0000447 - filled grain number
TO:0002727 - sterile lemma width
TO:0020033 - glume length
TO:0020034 - glume width
TO:0002672 - auxin content
TO:0002660 - cytokinin content
TO:0002675 - gibberellic acid content
|
PO:0009047 - stem
PO:0025034 - leaf
PO:0001083 - inflorescence development stage
PO:0009049 - inflorescence
|
Os08g0162100
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os08g06480.1
|
|
|
SDG725
|
OsSDG725
OsSET8
ASHH2
|
SET DOMAIN GROUP PROTEIN 725
|
SET Domain Group Protein725
SET DOMAIN GROUP725
SET protein 8
"ABSENT
SMALL
OR HOMEOTIC DISCS 1 HOMOLOG 2"
|
2
|
Reproductive organ - Panicle, Mode of branching
Vegetative organ - Culm
Biochemical character
Reproductive organ - Heading date
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Leaf
Seed - Morphological traits
|
GO:0008270 - zinc ion binding
GO:0034968 - histone lysine methylation
GO:0010422 - regulation of brassinosteroid biosynthetic process
GO:0009908 - flower development
GO:2000028 - regulation of photoperiodism, flowering
GO:0009742 - brassinosteroid mediated signaling
GO:0005634 - nucleus
GO:0018024 - histone-lysine N-methyltransferase activity
|
TO:0000391 - seed size
TO:0000206 - leaf angle
TO:0000456 - spikelet number
TO:0000207 - plant height
TO:0002616 - flowering time
TO:0000397 - grain size
TO:0000137 - days to heading
TO:0000145 - internode length
TO:0002688 - leaf lamina joint bending
|
PO:0007615 - flower development stage
|
Os02g0554000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os02g34850.1
|
|
|
SPL17
|
OsSPL17
|
RICE SQUAMOSA PROMOTER-BINDING-LIKE 17
|
Squamosa promoter-binding-like protein 17
|
9
|
Character as QTL - Yield and productivity
Character as QTL - Plant growth activity
Reproductive organ - Panicle, Mode of branching
Vegetative organ - Root
Vegetative organ - Culm
Other
|
GO:0010050 - vegetative phase change
GO:0010229 - inflorescence development
GO:0010432 - bract development
GO:0046872 - metal ion binding
GO:0048364 - root development
GO:0006350 - transcription
GO:0005634 - nucleus
GO:0003677 - DNA binding
GO:0045449 - regulation of transcription
GO:0048506 - regulation of timing of meristematic phase transition
GO:0060359 - response to ammonium ion
|
TO:0000656 - root development trait
TO:0000346 - tiller number
TO:0000586 - seminal root length
TO:0000621 - inflorescence development trait
TO:0000329 - tillering ability
TO:0000357 - growth and development trait
TO:0000050 - inflorescence branching
TO:0000011 - nitrogen sensitivity
|
PO:0025487 - bract primordium
PO:0001083 - inflorescence development stage
PO:0025034 - leaf
PO:0007520 - root development stage
|
Os09g0491532
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os09g31438.1
|
|
|
FTL9
|
OsFTL9
OsFT-L9
FT-L9
OsFTL9
FTL9
|
FLOWERING TIME LIKE GENE 9
|
FT-like gene 9
FT-like 9
Flowering Locus T-like 9
FT-like 9
|
1
|
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
Character as QTL - Yield and productivity
Seed - Morphological traits - Grain shape
|
GO:0009744 - response to sucrose stimulus
GO:0009750 - response to fructose stimulus
GO:0009749 - response to glucose stimulus
GO:0001558 - regulation of cell growth
|
TO:0000547 - primary branch number
TO:0000557 - secondary branch number
TO:0002759 - grain number
TO:0000397 - grain size
TO:0002736 - flower number
TO:0000149 - seed width
TO:0000456 - spikelet number
TO:0000480 - nutrient sensitivity
TO:0000304 - seed thickness
TO:0000271 - inflorescence length
|
PO:0025034 - leaf
|
Os01g0748800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g54490.1
|
|
|
MFT1
|
OsMFT1
|
MOTHER OF FT AND TFL1
|
MFT-like gene 1
|
6
|
Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Dormancy
Reproductive organ - Panicle, Mode of branching
Character as QTL - Germination
|
GO:0048623 - seed germination on parent plant
GO:0009740 - gibberellic acid mediated signaling
GO:0009738 - abscisic acid mediated signaling
GO:0009787 - regulation of abscisic acid mediated signaling
GO:0010371 - regulation of gibberellin biosynthetic process
GO:0009685 - gibberellin metabolic process
GO:0009651 - response to salt stress
GO:0009845 - seed germination
GO:0009687 - abscisic acid metabolic process
GO:0010187 - negative regulation of seed germination
GO:0009739 - response to gibberellin stimulus
GO:0009753 - response to jasmonic acid stimulus
GO:0048573 - photoperiodism, flowering
GO:0009737 - response to abscisic acid stimulus
GO:0005634 - nucleus
GO:0010229 - inflorescence development
GO:0009658 - chloroplast organization
GO:0009408 - response to heat
GO:0010231 - maintenance of seed dormancy
GO:0010162 - seed dormancy
|
TO:0000456 - spikelet number
TO:0000137 - days to heading
TO:0000430 - germination rate
TO:0000166 - gibberellic acid sensitivity
TO:0000373 - inflorescence anatomy and morphology trait
TO:0000615 - abscisic acid sensitivity
TO:0000621 - inflorescence development trait
TO:0006001 - salt tolerance
TO:0000172 - jasmonic acid sensitivity
TO:0000253 - seed dormancy
TO:0000619 - vivipary
TO:0000259 - heat tolerance
|
PO:0007057 - 0 seed germination stage
|
Os06g0498800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os06g30370.1
|
|
|
GNP5
|
OsbZIP35
BZIP35
OsGNP5
|
GRAIN NUMBER PER PANICLE 5
|
b-ZIP transcription factor 35
grain number per panicle 5
|
4
|
Tolerance and resistance - Stress tolerance
Character as QTL - Germination
Other
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
|
GO:0009414 - response to water deprivation
GO:0009737 - response to abscisic acid stimulus
GO:0009651 - response to salt stress
GO:0003700 - transcription factor activity
GO:0043565 - sequence-specific DNA binding
GO:0006979 - response to oxidative stress
GO:0008285 - negative regulation of cell proliferation
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0080050 - regulation of seed development
GO:0009845 - seed germination
GO:0010029 - regulation of seed germination
GO:0042542 - response to hydrogen peroxide
GO:0010229 - inflorescence development
GO:0009738 - abscisic acid mediated signaling
|
TO:0000382 - 1000-seed weight
TO:0000040 - panicle length
TO:0000396 - grain yield
TO:0000340 - total soluble sugar content
TO:0000557 - secondary branch number
TO:0000050 - inflorescence branching
TO:0000621 - inflorescence development trait
TO:0000402 - grain width
TO:0000447 - filled grain number
TO:0000449 - grain yield per plant
TO:0000276 - drought tolerance
TO:0006002 - proline content
TO:0000520 - stomatal closure rate
TO:0000153 - relative yield
TO:0000136 - relative water content
TO:0002657 - oxidative stress
TO:0000455 - seed set percent
TO:0000734 - grain length
TO:0000590 - grain weight
TO:0000653 - seed development trait
TO:0000397 - grain size
TO:0006001 - salt tolerance
|
PO:0025034 - leaf
PO:0001083 - inflorescence development stage
PO:0009005 - root
|
Os04g0181300
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g10260.1
|
|
|
CBE1
|
OsWD40-6
OsCBE1
|
CULLIN4-BASED E3 UBIQUITIN LIGASE 1
|
Cullin4-Based E3 ubiquitin ligase1
|
1
|
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Dormancy
|
GO:0010029 - regulation of seed germination
GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0009737 - response to abscisic acid stimulus
GO:0009738 - abscisic acid mediated signaling
GO:0009409 - response to cold
|
TO:0000152 - panicle number
TO:0000316 - photosynthetic ability
TO:0006001 - salt tolerance
TO:0000303 - cold tolerance
TO:0000276 - drought tolerance
TO:0000615 - abscisic acid sensitivity
TO:0002759 - grain number
TO:0001016 - relative chlorophyll content
|
|
Os01g0185400
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g09020.1
|
|
|
WD40-86
|
OsWD40-86
OsWDR5a
WDR5a
OsWDR5
WDR5
OsDWD41
DWD41
|
WD40 PROTEIN 86
|
WD repeat domain 5
DWD motif- containing protein 41
|
3
|
Reproductive organ - Panicle, Mode of branching
Character as QTL - Yield and productivity
Reproductive organ - Heading date
|
GO:0010229 - inflorescence development
GO:0005634 - nucleus
GO:0051568 - histone H3-K4 methylation
GO:0010228 - vegetative to reproductive phase transition
GO:0042393 - histone binding
GO:0009790 - embryonic development
GO:0040029 - regulation of gene expression, epigenetic
GO:0048188 - Set1C/COMPASS complex
|
TO:0000557 - secondary branch number
TO:0000137 - days to heading
TO:0002759 - grain number
TO:0000621 - inflorescence development trait
TO:0006032 - panicle size
|
PO:0001083 - inflorescence development stage
|
Os03g0725400
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os03g51550.1
LOC_Os03g51550.2
LOC_Os03g51550.3
|
|
|
GNP2
|
GSK1
Os GSK1
OsGSK1
OsSK21/OsGSK1
OsSK21
SK21
OsGNP2
|
GRAIN NUMBER PER PANICLE 2
|
GSK3/SHAGGY-Like Kinase 1
glycogen synthase kinase3-like gene 1
GSK3/SHAGGY-Like Kinase 21
GSK3-like Kinase 1
grain number per panicle 2
|
1
|
Character as QTL - Yield and productivity
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
Reproductive organ - Panicle, Mode of branching
Seed - Morphological traits - Grain shape
|
GO:0005524 - ATP binding
GO:0009809 - lignin biosynthetic process
GO:0009742 - brassinosteroid mediated signaling
GO:0009825 - multidimensional cell growth
GO:0005737 - cytoplasm
GO:0006468 - protein amino acid phosphorylation
GO:0007165 - signal transduction
GO:0005829 - cytosol
GO:0009409 - response to cold
GO:0009408 - response to heat
GO:0009651 - response to salt stress
GO:0009414 - response to water deprivation
GO:0009965 - leaf morphogenesis
GO:0042538 - hyperosmotic salinity response
GO:0004674 - protein serine/threonine kinase activity
GO:0046827 - positive regulation of protein export from nucleus
GO:0010229 - inflorescence development
GO:0050821 - protein stabilization
GO:0009733 - response to auxin stimulus
GO:0009729 - detection of brassinosteroid stimulus
GO:0005886 - plasma membrane
|
TO:0000731 - lignin content
TO:0000449 - grain yield per plant
TO:0000396 - grain yield
TO:0000447 - filled grain number
TO:0000050 - inflorescence branching
TO:0000621 - inflorescence development trait
TO:0000734 - grain length
TO:0000557 - secondary branch number
TO:0000402 - grain width
TO:0002759 - grain number
TO:0000382 - 1000-seed weight
TO:0000207 - plant height
TO:0002677 - brassinosteroid sensitivity
TO:0000276 - drought tolerance
TO:0000303 - cold tolerance
TO:0000153 - relative yield
TO:0000206 - leaf angle
TO:0000124 - flag leaf angle
TO:0000733 - lignin biosynthesis trait
TO:0006001 - salt tolerance
|
PO:0001083 - inflorescence development stage
|
Os01g0205700
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os01g10840.1
|
|
|
RFL
|
OSL
FL
APO2
APO2/RFL
SSC
SSC/RFL/APO2
OsRFL
OsFL
OsAPO2
OsSSC
|
FLO-LFY HOMOLOG OF RICE
|
Rice LFY-like gene
Probable transcription factor FL
RICE FLORICAULA
ABERRANT PANICLE ORGANIZATION 2
RFL/ABERRANT PANICLE ORGANIZATION 2
SHORT and SOLID CULM
RICE FLORICAULA/LEAFY
|
4
|
Vegetative organ - Shoot apical meristem(SAM)
Tolerance and resistance - Stress tolerance
Vegetative organ - Culm
Reproductive organ - Panicle, Mode of branching
Reproductive organ - panicle
Reproductive organ - Heading date
Character as QTL - Yield and productivity
|
GO:0007275 - multicellular organismal development
GO:0010081 - regulation of inflorescence meristem growth
GO:0010223 - secondary shoot formation
GO:0045449 - regulation of transcription
GO:0048573 - photoperiodism, flowering
GO:0010229 - inflorescence development
GO:0010372 - positive regulation of gibberellin biosynthetic process
GO:0045487 - gibberellin catabolic process
GO:0043067 - regulation of programmed cell death
GO:0006309 - DNA fragmentation involved in apoptosis
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0009414 - response to water deprivation
GO:0009742 - brassinosteroid mediated signaling
GO:0051510 - regulation of unidimensional cell growth
GO:0051302 - regulation of cell division
GO:0010073 - meristem maintenance
GO:0006350 - transcription
GO:0005634 - nucleus
GO:0003677 - DNA binding
|
TO:0000040 - panicle length
TO:0000447 - filled grain number
TO:0000011 - nitrogen sensitivity
TO:0000145 - internode length
TO:0000329 - tillering ability
TO:0000276 - drought tolerance
TO:0006016 - meristem tissue development trait
TO:0000557 - secondary branch number
TO:0001035 - stem width
TO:0000050 - inflorescence branching
TO:0000207 - plant height
TO:0000576 - stem length
TO:0002759 - grain number
TO:0002616 - flowering time
TO:0000456 - spikelet number
TO:0006032 - panicle size
TO:0000621 - inflorescence development trait
TO:0000547 - primary branch number
TO:0002675 - gibberellic acid content
TO:0002677 - brassinosteroid sensitivity
|
PO:0001083 - inflorescence development stage
PO:0007089 - stem elongation stage
PO:0000017 - vascular leaf primordium
PO:0006079 - shoot meristem
PO:0000034 - vascular system
|
Os04g0598300
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g51000.1
|
|
|
SPA
|
spa
|
SMALL PANICLE
|
small panicle
|
|
Reproductive organ - Panicle, Mode of branching
|
GO:0007275 - multicellular organismal development
|
|
|
-
|
|
|
|
SMG2
|
YDA1
OsMKKK10
MKKK10
SMG2/OsMKKK10
OsSMG2
OsMAPKKK10
MAPKKK10
|
SMALL GRAIN 2
|
YODA 1
OsYODA-2
YODA-2
MAPK kinase kinase 10
small grain 2
|
4
|
Biochemical character
Reproductive organ - Panicle, Mode of branching
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Grain shape
|
GO:0042127 - regulation of cell proliferation
GO:0080036 - regulation of cytokinin mediated signaling
GO:0010103 - stomatal complex morphogenesis
GO:0009690 - cytokinin metabolic process
GO:0010229 - inflorescence development
GO:0009741 - response to brassinosteroid stimulus
GO:0009742 - brassinosteroid mediated signaling
GO:0045595 - regulation of cell differentiation
GO:0009793 - embryonic development ending in seed dormancy
GO:0005524 - ATP binding
GO:0004672 - protein kinase activity
|
TO:0000397 - grain size
TO:0002759 - grain number
TO:0000590 - grain weight
TO:0000040 - panicle length
TO:0000456 - spikelet number
TO:0000621 - inflorescence development trait
TO:0000734 - grain length
TO:0002677 - brassinosteroid sensitivity
TO:0002660 - cytokinin content
TO:0000447 - filled grain number
|
PO:0001083 - inflorescence development stage
|
Os04g0559800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g47240.3
LOC_Os04g47240.2
LOC_Os04g47240.1
|
|
|
SET33
|
OsSET33
OsSDG723
SDG723
OsTrx1
Trx1
OsTrx1/SDG723
DLN219
OsDLN219
|
SET PROTEIN 33
|
SET protein 33
Trithorax1
TRITHORAX-like protein OsTrx1
SET domain group protein 723
DLN repressor 219
DLN motif protein 219
|
9
|
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
Biochemical character
Reproductive organ - Heading date
|
GO:0070505 - pollen coat
GO:0008270 - zinc ion binding
GO:0009909 - regulation of flower development
GO:0006325 - chromatin organization
GO:0005634 - nucleus
GO:0005737 - cytoplasm
GO:0010093 - specification of floral organ identity
GO:0010314 - phosphatidylinositol-5-phosphate binding
GO:0042800 - histone methyltransferase activity (H3-K4 specific)
GO:0010229 - inflorescence development
GO:0005886 - plasma membrane
GO:0048653 - anther development
GO:0048574 - long-day photoperiodism, flowering
|
TO:0002616 - flowering time
TO:0000621 - inflorescence development trait
TO:0000557 - secondary branch number
TO:0000137 - days to heading
TO:0002759 - grain number
|
PO:0001083 - inflorescence development stage
PO:0001007 - pollen development stage
PO:0009066 - anther
PO:0001004 - anther development stage
|
Os09g0134500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os09g04890.1
|
|
|
TAB1
|
Os WUS
WUS
OsWOX1
WOX1
OsWUS
OsTAB
TAB1/WUS
MOC3
OsMOC3
MOC3/OsWUS
SRT1
MOC3/TAB1/SRT1
DC1
OsDC1
DAP1
OsDAP1
|
TILLERS ABSENT 1
|
WUSCHEL
WUSCHEL-related homeobox 1
WUSCHEL-LIKE HOMEOBOX 1
WUS Orthologue
TILLERS ABSENT1
MONOCULM 3
completely sterile and reduced tillering 1
decreased culm number 1
Dwarf and aberrant panicle 1
|
4
|
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
Other
Vegetative organ - Culm
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Female sterility
|
GO:0010229 - inflorescence development
GO:0009733 - response to auxin stimulus
GO:0048507 - meristem development
GO:0009414 - response to water deprivation
GO:0043565 - sequence-specific DNA binding
GO:0007275 - multicellular organismal development
GO:0006351 - transcription, DNA-dependent
GO:0003700 - transcription factor activity
GO:0009735 - response to cytokinin stimulus
GO:0005634 - nucleus
GO:0019954 - asexual reproduction
|
TO:0000346 - tiller number
TO:0000447 - filled grain number
TO:0000557 - secondary branch number
TO:0000207 - plant height
TO:0000040 - panicle length
TO:0000456 - spikelet number
TO:0002660 - cytokinin content
TO:0000180 - spikelet fertility
TO:0000657 - spikelet anatomy and morphology trait
TO:0000621 - inflorescence development trait
TO:0000223 - pistil anatomy and morphology trait
TO:0000329 - tillering ability
TO:0000152 - panicle number
TO:0000215 - stamen anatomy and morphology trait
TO:0000436 - spikelet sterility
TO:0000163 - auxin sensitivity
TO:0000358 - female sterility
TO:0000661 - tiller bud dormancy
TO:0000276 - drought tolerance
|
PO:0001083 - inflorescence development stage
PO:0007073 - 2 formation of axillary shoot stage
|
Os04g0663600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g56780.1
|
|
|
MIR529A
|
miR529a
Osa-miR529a
OsmiR529a
|
MICRORNA529A
|
MICRORNA529a
osa-miRNA529a
os-miRNA529a
|
2
|
Reproductive organ - Panicle, Mode of branching
Other
|
GO:0006379 - mRNA cleavage
GO:0016442 - RNA-induced silencing complex
GO:0035068 - micro-ribonucleoprotein complex
GO:0035195 - gene silencing by miRNA
|
TO:0000346 - tiller number
TO:0000329 - tillering ability
TO:0000050 - inflorescence branching
|
|
-
|
|
|
|
MIR156D
|
miR156d
OsmiR156d
osmiR156d
osa-miR156d
osa-MIR156d
|
MICRORNA156D
|
micro RNA 156d
microRNA156d
osa-miRNA156d
|
2
|
Vegetative organ - Culm
Other
Reproductive organ - Panicle, Mode of branching
Tolerance and resistance - Disease resistance
|
GO:0035195 - gene silencing by miRNA
GO:0035068 - micro-ribonucleoprotein complex
GO:0050832 - defense response to fungus
GO:0016442 - RNA-induced silencing complex
GO:0006379 - mRNA cleavage
|
TO:0000074 - blast disease
TO:0000329 - tillering ability
TO:0000050 - inflorescence branching
TO:0006032 - panicle size
TO:0000456 - spikelet number
|
PO:0009006 - shoot system
|
-
|
|
|
|
MIR156F
|
miR156f
osmiR156f
OsmiR156f
osa-miR156f
osa-MIR156fosa-miR156f-3p osa-miR156f-5p
|
MICRORNA156F
|
micro RNA 156f
microRNA156f
osa-miRNA156f
|
8
|
Other
Reproductive organ - Panicle, Mode of branching
Vegetative organ - Culm
Tolerance and resistance - Disease resistance
Character as QTL - Yield and productivity
|
GO:0048506 - regulation of timing of meristematic phase transition
GO:0035068 - micro-ribonucleoprotein complex
GO:0050832 - defense response to fungus
GO:0016442 - RNA-induced silencing complex
GO:0006379 - mRNA cleavage
GO:0035195 - gene silencing by miRNA
|
TO:0000207 - plant height
TO:0000346 - tiller number
TO:0000152 - panicle number
TO:0000074 - blast disease
|
|
-
|
|
|
|
LAX2
|
OsLAX2
Gnp4/LAX2
Gnp4
|
LAX PANICLE 2
|
lax panicle2
Grain number per-panicle 4
|
4
|
Character as QTL - Yield and productivity
Reproductive organ - Panicle, Mode of branching
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Grain shape
Reproductive organ - Inflorescence
|
GO:0005634 - nucleus
GO:0030307 - positive regulation of cell growth
GO:0010229 - inflorescence development
GO:0009734 - auxin mediated signaling pathway
|
TO:0000050 - inflorescence branching
TO:0000163 - auxin sensitivity
TO:0000734 - grain length
TO:0000621 - inflorescence development trait
TO:0000447 - filled grain number
TO:0000557 - secondary branch number
TO:0000396 - grain yield
TO:0002759 - grain number
TO:0000456 - spikelet number
TO:0000382 - 1000-seed weight
TO:0000152 - panicle number
|
PO:0001083 - inflorescence development stage
|
Os04g0396500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap
(
IRGSP 1.0
/
Build5
)
|
LOC_Os04g32510.1
|
|
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