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CGSNL Gene Symbol	Gene symbol synonym(s)	CGSNL Gene Name	Gene name synonym(s)	Chr. No.	Trait Class	Gene Ontology	Trait Ontology	Plant Ontology	RAP ID	MSU ID	Mutant Image
NH1	OsNH1 OsNPR1 OsNPR1/NH1 NPR1 OsPR2 PR2 DLN5 OsDLN5 OsBTBA1 BTBA1	NPR1 HOMOLOG 1	NPR1-like 1 NPR1 homologue 1 nonexpresser of PR genes 1 Arabidopsis NPR1 homolog 1 non-expressor of pathogenesis-related gene 1 Arabidopsis NPR1 homologue 1 pathogenesis-related gene 2 nonexpressor of PR genes 1 Nonexpressor of Pathogenesis-Related Genes1 NONEXPRESSOR OF PATHOGENESIS-RELATED1 HOMOLOG1 NONEXPRESSOR OF PATHOGENESIS-RELATED GENES1 non-expressor pathogenesis-related 1 NONEXPRESSOR OF PR1 DLN repressor 5 DLN motif protein 5 BTB-type E3 ubiquitin ligase A1	1	Character as QTL - Yield and productivity Tolerance and resistance - Disease resistance Tolerance and resistance - Lesion mimic Tolerance and resistance - Insect resistance Vegetative organ - Culm Tolerance and resistance - Stress tolerance Vegetative organ - Root	GO:0010200 - response to chitin GO:0009734 - auxin mediated signaling pathway GO:0002215 - defense response to nematode GO:0010112 - regulation of systemic acquired resistance GO:0008219 - cell death GO:0006952 - defense response GO:0048364 - root development GO:0010942 - positive regulation of cell death GO:0006950 - response to stress GO:0031348 - negative regulation of defense response GO:0045893 - positive regulation of transcription, DNA-dependent GO:0009625 - response to insect GO:0016563 - transcription activator activity GO:0009863 - salicylic acid mediated signaling pathway GO:0002237 - response to molecule of bacterial origin GO:0005829 - cytosol GO:0042742 - defense response to bacterium GO:0009737 - response to abscisic acid stimulus GO:0009867 - jasmonic acid mediated signaling pathway GO:0009609 - response to symbiotic bacterium GO:0002213 - defense response to insect GO:0009814 - defense response, incompatible interaction GO:0050832 - defense response to fungus GO:0009682 - induced systemic resistance GO:0009408 - response to heat GO:0009611 - response to wounding GO:0009627 - systemic acquired resistance GO:0005634 - nucleus GO:0051607 - defense response to virus	TO:0000656 - root development trait TO:0000175 - bacterial blight disease resistance TO:0000445 - seed number TO:0000255 - sheath blight disease resistance TO:0000346 - tiller number TO:0000615 - abscisic acid sensitivity TO:0000384 - nematode damage resistance TO:0000424 - brown planthopper resistance TO:0000401 - plant growth hormone sensitivity TO:0000207 - plant height TO:0000163 - auxin sensitivity TO:0000074 - blast disease TO:0000063 - mimic response TO:0000172 - jasmonic acid sensitivity TO:0000148 - viral disease resistance TO:0000112 - disease resistance TO:0000181 - seed weight	PO:0007089 - stem elongation stage PO:0007520 - root development stage	Os01g0194300 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os01g09800.1
HPL3	OsHPL3 CYP74B2 OsCYP74B2	HYDROPEROXIDE LYASE 3		2	Tolerance and resistance - Disease resistance Tolerance and resistance - Lesion mimic Biochemical character Tolerance and resistance - Insect resistance	GO:0042742 - defense response to bacterium GO:0002213 - defense response to insect GO:0009753 - response to jasmonic acid stimulus GO:0009055 - electron carrier activity GO:0016829 - lyase activity GO:0009695 - jasmonic acid biosynthetic process GO:0009867 - jasmonic acid mediated signaling pathway GO:0031407 - oxylipin metabolic process GO:0010597 - green leaf volatile biosynthetic process GO:0051607 - defense response to virus GO:0020037 - heme binding GO:0009941 - chloroplast envelope GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0004497 - monooxygenase activity GO:0005506 - iron ion binding GO:0009611 - response to wounding	TO:0000424 - brown planthopper resistance TO:0000175 - bacterial blight disease resistance TO:0000020 - black streak dwarf virus resistance TO:0000172 - jasmonic acid sensitivity TO:0002668 - jasmonic acid content TO:0000063 - mimic response TO:0000454 - stem borer resistance TO:0000396 - grain yield TO:0000148 - viral disease resistance		Os02g0110200 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os02g02000.1
NOE1	CATC OsCat OsCatC OsCATC OsNOE1 noe1 catC OsCATC CAT3 OsCAT3 LLM9428 OsLLM9428	NITRIC OXIDE EXCESS 1	catalase C catalase isozyme C nitric oxide excess1 large lesion mimic mutant 9428	3	Character as QTL - Yield and productivity Seed - Physiological traits - Shattering Vegetative organ - Culm Tolerance and resistance - Lesion mimic Tolerance and resistance - Stress tolerance Character as QTL - Plant growth activity Tolerance and resistance - Disease resistance Vegetative organ - Leaf Biochemical character	GO:0009725 - response to hormone stimulus GO:0042744 - hydrogen peroxide catabolic process GO:0005982 - starch metabolic process GO:0050832 - defense response to fungus GO:0009414 - response to water deprivation GO:0009642 - response to light intensity GO:0010939 - regulation of necrotic cell death GO:0033484 - nitric oxide homeostasis GO:0031348 - negative regulation of defense response GO:0009416 - response to light stimulus GO:0005634 - nucleus GO:0043067 - regulation of programmed cell death GO:0004096 - catalase activity GO:0006979 - response to oxidative stress GO:0045454 - cell redox homeostasis GO:0020037 - heme binding GO:0042742 - defense response to bacterium GO:0009409 - response to cold GO:0010229 - inflorescence development GO:0010150 - leaf senescence GO:0050777 - negative regulation of immune response GO:0009404 - toxin metabolic process GO:0009651 - response to salt stress GO:0005739 - mitochondrion GO:0006801 - superoxide metabolic process GO:0005777 - peroxisome GO:0042548 - regulation of photosynthesis, light reaction GO:0009737 - response to abscisic acid stimulus GO:0009408 - response to heat	TO:0000455 - seed set percent TO:0000259 - heat tolerance TO:0000276 - drought tolerance TO:0000063 - mimic response TO:0000357 - growth and development trait TO:0000175 - bacterial blight disease resistance TO:0000074 - blast disease TO:0000249 - leaf senescence TO:0000615 - abscisic acid sensitivity TO:0000401 - plant growth hormone sensitivity TO:0002657 - oxidative stress TO:0000605 - hydrogen peroxide content TO:0002662 - leaf rolling tolerance TO:0000152 - panicle number TO:0000621 - inflorescence development trait TO:0000326 - leaf color TO:0000447 - filled grain number TO:0000346 - tiller number TO:0000207 - plant height TO:0000382 - 1000-seed weight TO:0000460 - light intensity sensitivity TO:0000019 - seedling height TO:0002637 - leaf size TO:0000473 - grain shattering TO:0000075 - light sensitivity TO:0006001 - salt tolerance TO:0000303 - cold tolerance	PO:0020104 - leaf sheath PO:0001083 - inflorescence development stage PO:0001054 - 4 leaf senescence stage PO:0009047 - stem PO:0025034 - leaf	Os03g0131200 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g03910.1
SPL17	OsCAD1 CAD1	SPOTTED LEAF 17	spotted leaf 17 CONSTITUTIVE ACTIVE DEFENSE 1	1	Character as QTL - Plant growth activity Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance Character as QTL - Yield and productivity	GO:0016020 - membrane GO:0005829 - cytosol GO:0009626 - plant-type hypersensitive response GO:0009416 - response to light stimulus GO:0031347 - regulation of defense response GO:0009863 - salicylic acid mediated signaling pathway GO:0050832 - defense response to fungus GO:0009867 - jasmonic acid mediated signaling pathway GO:0042742 - defense response to bacterium GO:0006952 - defense response GO:0005634 - nucleus GO:0043067 - regulation of programmed cell death	TO:0000357 - growth and development trait TO:0002668 - jasmonic acid content TO:0000605 - hydrogen peroxide content TO:0000207 - plant height TO:0000382 - 1000-seed weight TO:0000063 - mimic response TO:0000075 - light sensitivity TO:0000455 - seed set percent TO:0000175 - bacterial blight disease resistance TO:0000074 - blast disease	PO:0025034 - leaf	Os01g0748900 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os01g54510.1
SPL18	Spl18 OsAT1 AT1	SPOTTED LEAF 18	spotted leaf 18	10	Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance	GO:0009626 - plant-type hypersensitive response GO:0042742 - defense response to bacterium GO:0050832 - defense response to fungus GO:0016747 - transferase activity, transferring acyl groups other than amino-acyl groups GO:0006952 - defense response	TO:0000175 - bacterial blight disease resistance TO:0000074 - blast disease TO:0000063 - mimic response TO:0002670 - momilactone A content	PO:0020104 - leaf sheath PO:0009049 - inflorescence	Os10g0195600 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os10g11980.1
SPL19	spl19	SPOTTED LEAF 19	spotted leaf 19		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL20	spl20	SPOTTED LEAF 20	spotted leaf 20		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL21	spl21	SPOTTED LEAF 21	spotted leaf 21		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL22	spl22	SPOTTED LEAF 22	spotted leaf 22		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL23	spl23	SPOTTED LEAF 23	spotted leaf 23		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL24	Spl24	SPOTTED LEAF 24	spotted leaf 24		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL25	spl25	SPOTTED LEAF 25	spotted leaf 25		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL26	Spl26	SPOTTED LEAF 26	spotted leaf 26		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
SPL27	Spl27	SPOTTED LEAF 27	spotted leaf 27		Tolerance and resistance - Lesion mimic	GO:0006952 - defense response			-
HLM1	NRAMP4 OsNRAMP4 Nrat1 Nramp6 OsNRAT1 NRAT1 FCO5	HR-LIKE LESION MIMIC 1	BACTERIOCIDE EFFECT 4 Nramp aluminum transporter 1 Functioning in Cesium Over-transport 5 HR-like lesion mimic 1	2	Tolerance and resistance - Disease resistance Biochemical character Tolerance and resistance - Stress tolerance Character as QTL - Plant growth activity Tolerance and resistance - Lesion mimic	GO:0016021 - integral to membrane GO:0015083 - aluminum ion transmembrane transporter activity GO:0052322 - positive regulation of phytoalexin biosynthetic process GO:0043068 - positive regulation of programmed cell death GO:0005886 - plasma membrane GO:0010044 - response to aluminum ion GO:0043410 - positive regulation of MAPKKK cascade GO:0042742 - defense response to bacterium GO:0005737 - cytoplasm GO:0030001 - metal ion transport	TO:0002758 - flag leaf lamina width TO:0000063 - mimic response TO:0000175 - bacterial blight disease resistance TO:0000605 - hydrogen peroxide content TO:0000357 - growth and development trait TO:0000207 - plant height TO:0002757 - flag leaf length TO:0000354 - aluminum sensitivity TO:0000040 - panicle length TO:0000734 - grain length TO:0000455 - seed set percent TO:0000447 - filled grain number TO:0000382 - 1000-seed weight TO:0000516 - relative root length	PO:0025034 - leaf	Os02g0131800 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os02g03900.1
BL5	bl5	BROWN LEAF SPOT 5	brown leaf spot5 brown leaf spot 5 brown leaf spot-5		Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000063 - mimic response TO:0000326 - leaf color TO:0000069 - variegated leaf	PO:0009025 - vascular leaf	-
BL6	bl6	BROWN LEAF SPOT 6	brown leaf spot6 brown leaf spot 6 brown leaf spot-6		Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000069 - variegated leaf TO:0000326 - leaf color TO:0000063 - mimic response	PO:0009025 - vascular leaf	-
SPL11	spl11 spl11* OsPUB11 PUB11 OsPUB11/SPL11 PUB11/SPL11	SPOTTED LEAF 11	spotted leaf11 spotted leaf-11 Protein spotted leaf 11 Cell death-related protein SPL11 plant U-box-containing protein 11 U-box protein 11 U-box-type E3 ubiquitin ligase 11	12	Reproductive organ - Heading date Tolerance and resistance - Disease resistance Tolerance and resistance - Lesion mimic	GO:0009614 - disease resistance GO:0043066 - negative regulation of apoptosis GO:0045824 - negative regulation of innate immune response GO:0048579 - negative regulation of long-day photoperiodism, flowering GO:2000028 - regulation of photoperiodism, flowering GO:0042742 - defense response to bacterium GO:0050832 - defense response to fungus GO:0000151 - ubiquitin ligase complex GO:0005488 - binding GO:0016567 - protein ubiquitination GO:0019941 - modification-dependent protein catabolic process GO:0043067 - regulation of programmed cell death GO:0031347 - regulation of defense response GO:0004842 - ubiquitin-protein ligase activity	TO:0000074 - blast disease TO:0000112 - disease resistance TO:0000175 - bacterial blight disease resistance TO:0000069 - variegated leaf TO:0000063 - mimic response	PO:0009025 - vascular leaf	Os12g0570000 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os12g38210.1	image Id ( 6711 )
SPL6	spl6	SPOTTED LEAF 6	spotted leaf6 spotted leaf 6 spotted leaf-6	1	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000063 - mimic response TO:0000069 - variegated leaf	PO:0009025 - vascular leaf	-		image Id ( 6721 )
SPL2	spl2(bl3) spl2 bl3	SPOTTED LEAF 2	spotted leaf2 spotted leaf 2 spotted leaf-2	2	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000069 - variegated leaf TO:0000063 - mimic response	PO:0009047 - stem PO:0009025 - vascular leaf	-		image Id ( 6724 )
BL1	bl1	BROWN LEAF SPOT 1	brown leaf spot1 brown leaf spot 1 brown leaf spot-1	2	Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000063 - mimic response TO:0000056 - stem color TO:0000069 - variegated leaf TO:0000326 - leaf color TO:0000221 - glume color	PO:0009088 - seed coat PO:0009025 - vascular leaf PO:0009047 - stem	-		image Id ( 6730 )
BL4	bl4	BROWN LEAF SPOT 4	brown leaf spot4 brown leaf spot 4 brown leaf spot-4	3	Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000069 - variegated leaf TO:0000063 - mimic response TO:0000326 - leaf color	PO:0009025 - vascular leaf	-
SPL3	spl3(bl4) spl3 bl4	SPOTTED LEAF 3	spotted leaf3 spotted leaf 3 spotted leaf-3	3	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000069 - variegated leaf TO:0000063 - mimic response	PO:0009025 - vascular leaf	-		image Id ( 6738 )
SPL8	spl8(bl8) spl8 bl8	SPOTTED LEAF 8	spotted leaf8 spotted leaf-8	5	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000063 - mimic response TO:0000069 - variegated leaf	PO:0009025 - vascular leaf	-		image Id ( 6762 )
SPL7	spl7 HSFA4D HSF10 HSF15 OsHSF15 SP17 OsHsf-15 rHsf10 OsHsfA4d HSfA4d lrd13 HSF1	SPOTTED LEAF 7	spotted leaf7 spotted leaf-7 Heat stress transcription factor Spl7 Heat stress transcription factor A-4d Heat stress transcription factor 15 Heat stress transcription factor 10 Protein SPOTTED LEAF 7 HEAT STRESS TRANSCRIPTION FACTOR A4d spontaneous lesion 7	5	Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance Tolerance and resistance - Stress tolerance	GO:0045893 - positive regulation of transcription, DNA-dependent GO:0005634 - nucleus GO:0002237 - response to molecule of bacterial origin GO:0006350 - transcription GO:0042742 - defense response to bacterium GO:0006355 - regulation of transcription, DNA-dependent GO:0050832 - defense response to fungus GO:0006950 - response to stress GO:0002679 - respiratory burst during defense response GO:0043565 - sequence-specific DNA binding GO:0002238 - response to molecule of fungal origin GO:0003677 - DNA binding GO:0005737 - cytoplasm GO:0003700 - transcription factor activity GO:0002221 - pattern recognition receptor signaling pathway GO:0045449 - regulation of transcription GO:0060268 - negative regulation of respiratory burst GO:0009628 - response to abiotic stimulus GO:0009409 - response to cold GO:0009408 - response to heat GO:0009607 - response to biotic stimulus GO:0009814 - defense response, incompatible interaction	TO:0000259 - heat tolerance TO:0000063 - mimic response TO:0000168 - abiotic stress trait TO:0000303 - cold tolerance TO:0000074 - blast disease TO:0000255 - sheath blight disease resistance TO:0000112 - disease resistance TO:0000069 - variegated leaf TO:0000605 - hydrogen peroxide content TO:0000175 - bacterial blight disease resistance	PO:0009009 - plant embryo PO:0009025 - vascular leaf PO:0009072 - plant ovary PO:0009049 - inflorescence PO:0009005 - root PO:0025034 - leaf PO:0020104 - leaf sheath PO:0009089 - endosperm	Os05g0530400 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os05g45410.1	image Id ( 6766 )
SPL4	spl4(bl5) spl4 bl5	SPOTTED LEAF 4	spotted leaf4 spotted leaf 4 spotted leaf-4	6	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000063 - mimic response TO:0000069 - variegated leaf	PO:0009025 - vascular leaf	-		image Id ( 6769 )
BL3	bl3	BROWN LEAF SPOT 3	brown leaf spot3 brown leaf spot 3 brown leaf spot-3	6	Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000221 - glume color TO:0000326 - leaf color TO:0000063 - mimic response TO:0000069 - variegated leaf	PO:0009088 - seed coat PO:0009025 - vascular leaf	-
BL2	bl2(blm) blm bl2	BROWN LEAF SPOT 2	brown leaf spot2 brown leaf spot 2 brown leaf spot-2	6	Tolerance and resistance - Lesion mimic	GO:0015996 - chlorophyll catabolic process	TO:0000056 - stem color TO:0000069 - variegated leaf TO:0000221 - glume color TO:0000063 - mimic response TO:0000326 - leaf color	PO:0009088 - seed coat PO:0009047 - stem PO:0009025 - vascular leaf	-
SPL9	spl9	SPOTTED LEAF 9	spotted leaf9 spotted leaf 9 spotted leaf-9	7	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000069 - variegated leaf TO:0000063 - mimic response	PO:0009047 - stem PO:0009025 - vascular leaf	-		image Id ( 6777 )
SPL5	spl5(bl6,spl5-1) bl6 spl5 SF3b3	SPOTTED LEAF 5	spotted leaf5 spotted leaf 5 spotted leaf-5 splicing factor 3b subunit 3	7	Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance	GO:0006587 - serotonin biosynthetic process from tryptophan GO:0043067 - regulation of programmed cell death GO:0031348 - negative regulation of defense response GO:0003676 - nucleic acid binding GO:0005634 - nucleus GO:0006952 - defense response	TO:0000069 - variegated leaf TO:0000112 - disease resistance TO:0002674 - tryptophan content TO:0000476 - growth hormone content TO:0000063 - mimic response	PO:0009025 - vascular leaf	Os07g0203700 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os07g10390.1	image Id ( 6779 )
FGL	fgl(fl) fl fgl OsFGL OsPorB PoPA PORA porA OsPORA PORB OsPORB	FADED GREEN LEAF	faded green leaf NADPH: protochlorophyllide oxidoreductase B NADPH-dependent protochlorophyllide oxidoreductase A	10	Coloration - Chlorophyll Biochemical character Tolerance and resistance - Stress tolerance Tolerance and resistance - Lesion mimic	GO:0015995 - chlorophyll biosynthetic process GO:0000166 - nucleotide binding GO:0007623 - circadian rhythm GO:0009416 - response to light stimulus GO:0009658 - chloroplast organization GO:0015979 - photosynthesis GO:0009507 - chloroplast GO:0048366 - leaf development GO:0016630 - protochlorophyllide reductase activity	TO:0000075 - light sensitivity TO:0000299 - leaf lamina color TO:0000496 - carotenoid content TO:0000655 - leaf development trait TO:0000326 - leaf color TO:0000495 - chlorophyll content TO:0000063 - mimic response TO:0000298 - chlorophyll ratio TO:0002715 - chloroplast development trait	PO:0009025 - vascular leaf PO:0001050 - leaf development stage	Os10g0496900 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os10g35370.2 LOC_Os10g35370.1	image Id ( 6795 )
SPL10	spl10	SPOTTED LEAF 10	spotted leaf10 spotted leaf 10 spotted leaf-10	10	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000063 - mimic response TO:0000069 - variegated leaf	PO:0009025 - vascular leaf	-		image Id ( 6796 )
SPL1	Spl1 spl1(sl,bl2) sl bl2 spl1	SPOTTED LEAF 1	spotted leaf1 spotted leaf 1 spotted leaf-1	12	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000069 - variegated leaf TO:0000063 - mimic response	PO:0009025 - vascular leaf	-		image Id ( 6805 )
BLM	blm (=bl2)	BLAST LESION MIMIC GENE	blast lesion mimic gene		Tolerance and resistance - Lesion mimic Tolerance and resistance - Stress tolerance Tolerance and resistance - Disease resistance	GO:0006952 - defense response GO:0009266 - response to temperature stimulus GO:0010941 - regulation of cell death GO:0042542 - response to hydrogen peroxide GO:0050832 - defense response to fungus GO:0052319 - regulation of phytoalexin biosynthetic process GO:0048571 - long-day photoperiodism	TO:0000432 - temperature response trait TO:0000074 - blast disease TO:0002670 - momilactone A content TO:0000063 - mimic response	PO:0025034 - leaf	-
PHYB	phyB PHYB1 OsPHYB OsphyB OsYHB YHB OsPHYB/OsYHB	PHYTOCHROME B	PhytochromeB Phytochrome B	3	Tolerance and resistance - Lesion mimic Vegetative organ - Leaf Biochemical character Tolerance and resistance - Stress tolerance Vegetative organ - Root Tolerance and resistance - Insect resistance Character as QTL - Yield and productivity Vegetative organ - Culm Reproductive organ - Heading date Coloration - Chlorophyll	GO:0006350 - transcription GO:0006355 - regulation of transcription, DNA-dependent GO:0007600 - sensory perception GO:0009585 - red, far-red light phototransduction GO:0005634 - nucleus GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome GO:0048579 - negative regulation of long-day photoperiodism, flowering GO:0010365 - positive regulation of ethylene biosynthetic process GO:0002213 - defense response to insect GO:0009645 - response to low light intensity stimulus GO:0010104 - regulation of ethylene mediated signaling pathway GO:0009873 - ethylene mediated signaling pathway GO:0007623 - circadian rhythm GO:0009640 - photomorphogenesis GO:0048573 - photoperiodism, flowering GO:0010380 - regulation of chlorophyll biosynthetic process GO:0000381 - regulation of alternative nuclear mRNA splicing, via spliceosome GO:0009414 - response to water deprivation GO:0042744 - hydrogen peroxide catabolic process GO:0005829 - cytosol GO:0010114 - response to red light GO:0000155 - two-component sensor activity GO:0018298 - protein-chromophore linkage GO:0018106 - peptidyl-histidine phosphorylation GO:0042803 - protein homodimerization activity GO:0017006 - protein-tetrapyrrole linkage GO:0009658 - chloroplast organization GO:0030912 - response to deep water GO:0009881 - photoreceptor activity GO:0016020 - membrane GO:0005524 - ATP binding GO:0008020 - G-protein coupled photoreceptor activity	TO:0000447 - filled grain number TO:0000346 - tiller number TO:0002715 - chloroplast development trait TO:0000207 - plant height TO:0000460 - light intensity sensitivity TO:0000424 - brown planthopper resistance TO:0000298 - chlorophyll ratio TO:0000326 - leaf color TO:0002616 - flowering time TO:0000063 - mimic response TO:0000158 - red light sensitivity TO:0000495 - chlorophyll content TO:0000276 - drought tolerance TO:0002710 - root shape TO:0000137 - days to heading TO:0000524 - submergence tolerance TO:0000566 - stomatal frequency TO:0000605 - hydrogen peroxide content TO:0002685 - crown root number TO:0000586 - seminal root length TO:0000135 - leaf length TO:0000455 - seed set percent		Os03g0309200 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g19590.1
ASA1	OASA1 (=ASA1) OsASA1 OASA1 OASA1(D323N) OASA1D	ANTHRANILATE SYNTHASE ALPHA-SUBUNIT 1	anthranilate synthase alpha subunit 1 feedback-insensitive a subunit of rice AS	3	Seed - Physiological traits - Taste Seed - Physiological traits - Storage substances Biochemical character Tolerance and resistance - Lesion mimic Vegetative organ - Leaf	GO:0010150 - leaf senescence GO:0004049 - anthranilate synthase activity GO:0051955 - regulation of amino acid transport GO:0000162 - tryptophan biosynthetic process	TO:0000462 - gelatinization temperature TO:0000409 - peak viscosity TO:0000063 - mimic response TO:0000134 - alkali digestion TO:0000249 - leaf senescence TO:0000696 - starch content TO:0000598 - protein content TO:0000196 - amylose content TO:0000266 - chalky endosperm		Os03g0826500 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g61120.1
ELS1	OASA2 (=ASA2) OsASA2 ASA2 OASA2 ASalpha2 OsASalpha2 OASA2 OsELS1	EARLY LEAF LESION AND SENESCENCE 1	anthranilate synthase alpha subunit 2 Anthranilate synthase alpha 2 subunit	3	Tolerance and resistance - Stress tolerance Tolerance and resistance - Lesion mimic Biochemical character Tolerance and resistance - Insect resistance Vegetative organ - Leaf Coloration - Chlorophyll	GO:0010380 - regulation of chlorophyll biosynthetic process GO:0042744 - hydrogen peroxide catabolic process GO:0006979 - response to oxidative stress GO:0004049 - anthranilate synthase activity GO:0009409 - response to cold GO:0009408 - response to heat GO:0010109 - regulation of photosynthesis GO:0043420 - anthranilate metabolic process GO:0009658 - chloroplast organization GO:0009416 - response to light stimulus GO:0006521 - regulation of cellular amino acid metabolic process GO:0010150 - leaf senescence GO:0043068 - positive regulation of programmed cell death GO:0000162 - tryptophan biosynthetic process GO:0002213 - defense response to insect GO:0009507 - chloroplast GO:0046685 - response to arsenic	TO:0000293 - chlorophyll-a content TO:0000295 - chlorophyll-b content TO:0000495 - chlorophyll content TO:0000249 - leaf senescence TO:0000424 - brown planthopper resistance TO:0000496 - carotenoid content TO:0002674 - tryptophan content TO:0000063 - mimic response TO:0002657 - oxidative stress TO:0002715 - chloroplast development trait TO:0000605 - hydrogen peroxide content TO:0000075 - light sensitivity TO:0000303 - cold tolerance TO:0002673 - amino acid content TO:0000259 - heat tolerance TO:0000326 - leaf color TO:0000316 - photosynthetic ability TO:0006002 - proline content	PO:0020104 - leaf sheath PO:0009047 - stem PO:0025034 - leaf	Os03g0264400 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g15780.5 LOC_Os03g15780.4 LOC_Os03g15780.1 LOC_Os03g15780.2
WAK25	OsWAK25	WALL-ASSOCIATED KINASE GENE 25	Wall-Associated Kinase 25	3	Tolerance and resistance - Lesion mimic Biochemical character Tolerance and resistance - Disease resistance	GO:0009611 - response to wounding GO:0009751 - response to salicylic acid stimulus GO:0050832 - defense response to fungus GO:0042742 - defense response to bacterium GO:0004674 - protein serine/threonine kinase activity GO:0005524 - ATP binding GO:0030247 - polysaccharide binding	TO:0000074 - blast disease TO:0000401 - plant growth hormone sensitivity TO:0000063 - mimic response TO:0000255 - sheath blight disease resistance TO:0000356 - brown spot disease resistance TO:0000175 - bacterial blight disease resistance		Os03g0225700 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g12470.1
SPL28	OsSPL28 PSL50 OsPSL50 AP1M1 OsAP1M1	SPOTTED LEAF 28	premature senescence leaf 50 AP-1 complex subunit mu 1 clathrin-associated adaptor protein complex 1 medium subunit mu 1 "clathrin-associated adaptor protein complex 1 medium subunit mu 1 protein"	1	Tolerance and resistance - Lesion mimic Vegetative organ - Leaf Tolerance and resistance - Stress tolerance Tolerance and resistance - Disease resistance	GO:0031410 - cytoplasmic vesicle GO:0052545 - callose localization GO:0050832 - defense response to fungus GO:0043231 - intracellular membrane-bounded organelle GO:0060627 - regulation of vesicle-mediated transport GO:0070265 - necrotic cell death GO:0006892 - post-Golgi vesicle-mediated transport GO:0042742 - defense response to bacterium GO:0006952 - defense response GO:0009408 - response to heat GO:0016192 - vesicle-mediated transport GO:0030131 - clathrin adaptor complex GO:0005794 - Golgi apparatus GO:0006886 - intracellular protein transport GO:0010941 - regulation of cell death GO:0010150 - leaf senescence	TO:0000249 - leaf senescence TO:0000259 - heat tolerance TO:0000063 - mimic response TO:0000074 - blast disease TO:0000175 - bacterial blight disease resistance TO:0000605 - hydrogen peroxide content TO:0000495 - chlorophyll content TO:0000112 - disease resistance	PO:0001054 - 4 leaf senescence stage PO:0025034 - leaf	Os01g0703600 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os01g50770.1 LOC_Os01g50770.2
ABC1	OsABC1 SPL32 OsSPL32 OsGLU OsFd-GOGAT Fd-GOGAT ABC1/ OsFd-GOGAT	ABNORMAL CYTOKININ RESPONSE 1	ferredoxin-glutamate synthase ferredoxin-GOGAT Ferredoxin-dependent Glu synthase ferredoxin-dependent glutamate synthase spotted leaf 32	7	Tolerance and resistance - Lesion mimic Coloration - Chlorophyll Biochemical character Tolerance and resistance - Stress tolerance Tolerance and resistance - Disease resistance	GO:0016020 - membrane GO:0046872 - metal ion binding GO:0051171 - regulation of nitrogen compound metabolic process GO:0006520 - cellular amino acid metabolic process GO:0010150 - leaf senescence GO:0019740 - nitrogen utilization GO:0042128 - nitrate assimilation GO:0009941 - chloroplast envelope GO:0009658 - chloroplast organization GO:0060359 - response to ammonium ion GO:0016041 - glutamate synthase (ferredoxin) activity GO:0006537 - glutamate biosynthetic process GO:0031347 - regulation of defense response GO:0048046 - apoplast GO:0010167 - response to nitrate GO:0009409 - response to cold GO:0009416 - response to light stimulus GO:0019676 - ammonia assimilation cycle GO:0006541 - glutamine metabolic process GO:0051538 - 3 iron, 4 sulfur cluster binding GO:0042744 - hydrogen peroxide catabolic process GO:0080114 - positive regulation of glycine hydroxymethyltransferase activity GO:0005739 - mitochondrion GO:0031667 - response to nutrient levels GO:0009853 - photorespiration GO:0042742 - defense response to bacterium GO:0009570 - chloroplast stroma GO:0080093 - regulation of photorespiration	TO:0000063 - mimic response TO:0000207 - plant height TO:0000466 - carbon content TO:0000480 - nutrient sensitivity TO:0000303 - cold tolerance TO:0002673 - amino acid content TO:0000075 - light sensitivity TO:0000326 - leaf color TO:0000340 - total soluble sugar content TO:0000346 - tiller number TO:0000605 - hydrogen peroxide content TO:0000495 - chlorophyll content TO:0000249 - leaf senescence TO:0000175 - bacterial blight disease resistance	PO:0001054 - 4 leaf senescence stage	Os07g0658400 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os07g46460.1
LMPA	OSA7 OsA7 osAHA7 AHA7 PAA-Hwa OsLMPA	LESION MIMIC LEAF AND PANICLE APICAL ABORTION	plasma membrane H+-ATPase 7 PM H+-ATPase 7 plasma membrane H+ P-Type ATPase 7 panicle apical abortion-h lesion mimic leaf and panicle apical abortion	4	Vegetative organ - Culm Tolerance and resistance - Lesion mimic Tolerance and resistance - Stress tolerance Character as QTL - Yield and productivity Biochemical character Reproductive organ - panicle Coloration - Chlorophyll	GO:0009414 - response to water deprivation GO:0009408 - response to heat GO:0010229 - inflorescence development GO:0010167 - response to nitrate GO:0010119 - regulation of stomatal movement GO:0009737 - response to abscisic acid stimulus GO:0043067 - regulation of programmed cell death GO:0060359 - response to ammonium ion GO:0006754 - ATP biosynthetic process GO:0046872 - metal ion binding GO:0005773 - vacuole GO:0009658 - chloroplast organization GO:0005524 - ATP binding GO:0005886 - plasma membrane GO:0009651 - response to salt stress GO:0005634 - nucleus GO:0008553 - hydrogen-exporting ATPase activity, phosphorylative mechanism GO:0016021 - integral to membrane	TO:0000063 - mimic response TO:0006001 - salt tolerance TO:0002715 - chloroplast development trait TO:0000657 - spikelet anatomy and morphology trait TO:0000371 - yield trait TO:0000293 - chlorophyll-a content TO:0000295 - chlorophyll-b content TO:0000496 - carotenoid content TO:0000207 - plant height TO:0000447 - filled grain number TO:0000621 - inflorescence development trait TO:0000276 - drought tolerance TO:0000615 - abscisic acid sensitivity TO:0000040 - panicle length TO:0000259 - heat tolerance TO:0000605 - hydrogen peroxide content	PO:0025034 - leaf PO:0001083 - inflorescence development stage PO:0009047 - stem PO:0020104 - leaf sheath PO:0009005 - root PO:0009049 - inflorescence PO:0000025 - root tip	Os04g0656100 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os04g56160.3 LOC_Os04g56160.1 LOC_Os04g56160.2
GNS1	OsPR2 PR2 Gns1 OsGNS1 OsEGL1	BETA GLUCANASE 1	(1,3;1,4)-b-glucanase (1,3;1,4)-beta-glucanase pathogenesis-related gene 2 endo-(1,3;1,4)-beta-glucanase 1 glucanase-1	5	Biochemical character Tolerance and resistance - Stress tolerance Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance	GO:0043169 - cation binding GO:0009817 - defense response to fungus, incompatible interaction GO:0009723 - response to ethylene stimulus GO:0048364 - root development GO:0009735 - response to cytokinin stimulus GO:0009611 - response to wounding GO:0009617 - response to bacterium GO:0009409 - response to cold GO:0009645 - response to low light intensity stimulus GO:0009751 - response to salicylic acid stimulus GO:0002238 - response to molecule of fungal origin GO:0005975 - carbohydrate metabolic process GO:0005886 - plasma membrane GO:0005773 - vacuole GO:0042972 - licheninase activity GO:0050832 - defense response to fungus GO:0005618 - cell wall GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds GO:0009651 - response to salt stress GO:0009266 - response to temperature stimulus GO:0010332 - response to gamma radiation GO:0048046 - apoplast	TO:0000207 - plant height TO:0000432 - temperature response trait TO:0000173 - ethylene sensitivity TO:0000168 - abiotic stress trait TO:0000179 - biotic stress trait TO:0000401 - plant growth hormone sensitivity TO:0000167 - cytokinin sensitivity TO:0000074 - blast disease TO:0000063 - mimic response TO:0000656 - root development trait TO:0000460 - light intensity sensitivity	PO:0007520 - root development stage PO:0009005 - root	Os05g0375400 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os05g31140.1 LOC_Os05g31140.2 LOC_Os05g31140.3
ACDR1	OsEDR1 OsACDR1 EDR1 OsMAPKKK1 MAPKKK1 SPL3 OsSPL3	ACCELERATED CELL DEATH AND RESISTANCE 1	Oryza sativa accelerated cell death and resistance 1 accelerated cell death and resistance 1 enhanced disease resistance 1 EDR1 ortholog	3	Tolerance and resistance - Stress tolerance Tolerance and resistance - Lesion mimic Tolerance and resistance - Disease resistance	GO:0000186 - activation of MAPKK activity GO:0005524 - ATP binding GO:0009414 - response to water deprivation GO:0009737 - response to abscisic acid stimulus GO:0031349 - positive regulation of defense response GO:0009723 - response to ethylene stimulus GO:0009620 - response to fungus GO:0009617 - response to bacterium GO:0050832 - defense response to fungus GO:0046777 - protein amino acid autophosphorylation GO:0000165 - MAPKKK cascade GO:0010942 - positive regulation of cell death GO:0008219 - cell death GO:0010364 - regulation of ethylene biosynthetic process GO:0004709 - MAP kinase kinase kinase activity	TO:0000175 - bacterial blight disease resistance TO:0002668 - jasmonic acid content TO:0000063 - mimic response TO:0000276 - drought tolerance TO:0000615 - abscisic acid sensitivity TO:0000074 - blast disease		Os03g0160100 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os03g06410.1
LMS	OsLMS	LESION MIMIC AND SENESCENCE		2	Tolerance and resistance - Lesion mimic	GO:0017018 - myosin phosphatase activity GO:0005634 - nucleus GO:0003723 - RNA binding GO:0008420 - CTD phosphatase activity	TO:0000063 - mimic response		Os02g0639000 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os02g42600.1
SL	OsSL sl (spl1) sl* sl spl1 CYP71P1 Os CYP71P1 T5H OsT5H CYP71A1 OsCYP71A1 OsLLM1 LLM1 LLM1/OsSL ELL1 OsELL1 ELL1/SL OsT5H1	SEKIGUCHI LESION	Sekiguchi lesion Cytochrome P450 71P1 tryptamine 5-hydroxylase large lesion mimic 1 early lesion leaf 1	12	Tolerance and resistance - Insect resistance Tolerance and resistance - Lesion mimic Tolerance and resistance - Stress tolerance Vegetative organ - Leaf Coloration - Chlorophyll Vegetative organ - Culm Tolerance and resistance - Disease resistance Seed - Morphological traits - Grain shape	GO:0009651 - response to salt stress GO:0030187 - melatonin biosynthetic process GO:0010446 - response to alkalinity GO:0010224 - response to UV-B GO:0009737 - response to abscisic acid stimulus GO:0009723 - response to ethylene stimulus GO:0009739 - response to gibberellin stimulus GO:0009735 - response to cytokinin stimulus GO:0009733 - response to auxin stimulus GO:0009753 - response to jasmonic acid stimulus GO:0009741 - response to brassinosteroid stimulus GO:0005789 - endoplasmic reticulum membrane GO:0006587 - serotonin biosynthetic process from tryptophan GO:0042427 - serotonin biosynthetic process GO:0002213 - defense response to insect GO:0004497 - monooxygenase activity GO:0020037 - heme binding GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0009055 - electron carrier activity GO:0005506 - iron ion binding GO:0005783 - endoplasmic reticulum GO:0009658 - chloroplast organization GO:0070265 - necrotic cell death GO:0012501 - programmed cell death GO:0009416 - response to light stimulus GO:0052545 - callose localization GO:0009266 - response to temperature stimulus GO:0009409 - response to cold GO:0009725 - response to hormone stimulus GO:0009408 - response to heat GO:0009414 - response to water deprivation GO:0009646 - response to absence of light GO:0006913 - nucleocytoplasmic transport	TO:0000454 - stem borer resistance TO:0000615 - abscisic acid sensitivity TO:0000401 - plant growth hormone sensitivity TO:0006001 - salt tolerance TO:0000592 - 1000-dehulled grain weight TO:0000447 - filled grain number TO:0000734 - grain length TO:0000468 - leaf blast disease resistance TO:0000455 - seed set percent TO:0002757 - flag leaf length TO:0000172 - jasmonic acid sensitivity TO:0002677 - brassinosteroid sensitivity TO:0000495 - chlorophyll content TO:0000063 - mimic response TO:0000293 - chlorophyll-a content TO:0000259 - heat tolerance TO:0000295 - chlorophyll-b content TO:0000476 - growth hormone content TO:0000276 - drought tolerance TO:0000496 - carotenoid content TO:0000481 - alkali sensitivity TO:0000075 - light sensitivity TO:0000261 - insect damage resistance TO:0000166 - gibberellic acid sensitivity TO:0000163 - auxin sensitivity TO:0000432 - temperature response trait TO:0000424 - brown planthopper resistance TO:0000207 - plant height TO:0000397 - grain size TO:0000346 - tiller number TO:0000167 - cytokinin sensitivity TO:0000357 - growth and development trait TO:0000482 - chemical stress sensitivity TO:0002715 - chloroplast development trait TO:0000173 - ethylene sensitivity TO:0000605 - hydrogen peroxide content TO:0000303 - cold tolerance TO:0000601 - UV-B light sensitivity	PO:0009011 - plant structure PO:0000003 - whole plant PO:0009006 - shoot system PO:0007010 - whole plant fruit ripening stage PO:0009025 - vascular leaf PO:0009005 - root PO:0009049 - inflorescence	Os12g0268000 Oryzabase ( IRGSP 1.0 / Build5 ) Rap ( IRGSP 1.0 / Build5 )	LOC_Os12g16720.1
SPL12	spl12(t) spl12(t)*	SPOTTED LEAF 12	spotted leaf 12 spotted leaf-12	2	Tolerance and resistance - Lesion mimic	GO:0006952 - defense response GO:0015996 - chlorophyll catabolic process	TO:0000063 - mimic response	PO:0000003 - whole plant PO:0009011 - plant structure	-
SPL5-2(T)	spl5-2(t) spl5-2	SPOTTED LEAF5-2(T)	spotted leaf5-2(t) spotted leaf 5-2		Vegetative organ - Culm Tolerance and resistance - Lesion mimic	GO:0006952 - defense response	TO:0000207 - plant height TO:0000063 - mimic response		-
SPL12	Spl12(t) Spl12* Spl12	SPOTTED LEAF 12	Spotted leaf12(t) Spotted leaf-12 spotted leaf 12		Tolerance and resistance - Lesion mimic Vegetative organ - Culm	GO:0006952 - defense response	TO:0000207 - plant height TO:0000063 - mimic response	PO:0000003 - whole plant PO:0009011 - plant structure	-
SPL13	spl13(t) spl13* spl13	SPOTTED LEAF 13	spotted leaf13(t) spotted leaf-13 spotted leaf 13		Tolerance and resistance - Lesion mimic Vegetative organ - Culm	GO:0006952 - defense response	TO:0000063 - mimic response TO:0000207 - plant height	PO:0009011 - plant structure PO:0000003 - whole plant	-
SPL14	spl14(t) spl14* spl14	SPOTTED LEAF 14	spotted leaf14(t) spotted leaf-14 spotted leaf 14		Tolerance and resistance - Lesion mimic Vegetative organ - Culm	GO:0006952 - defense response	TO:0000207 - plant height TO:0000063 - mimic response	PO:0009011 - plant structure PO:0000003 - whole plant	-

105 Hit First Previous 1-50 51-100 101-105 Next Last All

GO:0006952-defense response (43)
GO:0042742-defense response to bacterium (43)
GO:0050832-defense response to fungus (36)
GO:0010150-leaf senescence (20)
GO:0009658-chloroplast organization (18)
GO:0005524-ATP binding (17)
GO:0009416-response to light stimulus (17)
GO:0005634-nucleus (15)
GO:0043067-regulation of programmed ... (15)
GO:0009408-response to heat (13)
GO:0009651-response to salt stress (13)
GO:0031348-negative regulation of de ... (13)
GO:0005886-plasma membrane (12)
GO:0005737-cytoplasm (11)
GO:0005829-cytosol (11)
GO:0012501-programmed cell death (11)
GO:0009409-response to cold (10)
GO:0016021-integral to membrane (10)
GO:0031347-regulation of defense res ... (10)
GO:0009414-response to water deprivation (9)
GO:0009737-response to abscisic acid ... (9)
GO:0009867-jasmonic acid mediated si ... (9)
GO:0015996-chlorophyll catabolic process (9)
GO:0060548-negative regulation of ce ... (9)
GO:0002213-defense response to insect (8)
GO:0009507-chloroplast (8)
GO:0009863-salicylic acid mediated s ... (8)
GO:0004674-protein serine/threonine ... (7)
GO:0005783-endoplasmic reticulum (6)
GO:0009266-response to temperature s ... (6)
GO:0009611-response to wounding (6)
GO:0010941-regulation of cell death (6)
GO:0015995-chlorophyll biosynthetic ... (6)
GO:0051607-defense response to virus (6)
GO:0006979-response to oxidative stress (5)
GO:0009626-plant-type hypersensitive ... (5)
GO:0009642-response to light intensity (5)
GO:0009753-response to jasmonic acid ... (5)
GO:0042542-response to hydrogen peroxide (5)
GO:0048573-photoperiodism, flowering (5)
GO:0070265-necrotic cell death (5)
GO:0002238-response to molecule of f ... (4)
GO:0004672-protein kinase activity (4)
GO:0005739-mitochondrion (4)
GO:0006782-protoporphyrinogen IX bio ... (4)
GO:0008219-cell death (4)
GO:0009620-response to fungus (4)
GO:0009723-response to ethylene stimulus (4)
GO:0009751-response to salicylic aci ... (4)
GO:0010939-regulation of necrotic ce ... (4)
GO:0016020-membrane (4)
GO:0042744-hydrogen peroxide catabol ... (4)
GO:0046872-metal ion binding (4)
GO:0048366-leaf development (4)
GO:0000139-Golgi membrane (3)
GO:0002237-response to molecule of b ... (3)
GO:0002679-respiratory burst during ... (3)
GO:0005506-iron ion binding (3)
GO:0005794-Golgi apparatus (3)
GO:0006355-regulation of transcripti ... (3)
GO:0006468-protein amino acid phosph ... (3)
GO:0008270-zinc ion binding (3)
GO:0009555-pollen development (3)
GO:0009617-response to bacterium (3)
GO:0009645-response to low light int ... (3)
GO:0009646-response to absence of light (3)
GO:0009725-response to hormone stimulus (3)
GO:0009735-response to cytokinin sti ... (3)
GO:0009739-response to gibberellin s ... (3)
GO:0009941-chloroplast envelope (3)
GO:0010109-regulation of photosynthesis (3)
GO:0010114-response to red light (3)
GO:0010380-regulation of chlorophyll ... (3)
GO:0010942-positive regulation of ce ... (3)
GO:0016192-vesicle-mediated transport (3)
GO:0016705-oxidoreductase activity, ... (3)
GO:0020037-heme binding (3)
GO:0033014-tetrapyrrole biosynthetic ... (3)
GO:0042743-hydrogen peroxide metabol ... (3)
GO:0043068-positive regulation of pr ... (3)
GO:0043069-negative regulation of pr ... (3)
GO:0045893-positive regulation of tr ... (3)
GO:0048364-root development (3)
GO:0000162-tryptophan biosynthetic p ... (2)
GO:0000302-response to reactive oxyg ... (2)
GO:0002221-pattern recognition recep ... (2)
GO:0003676-nucleic acid binding (2)
GO:0003746-translation elongation fa ... (2)
GO:0003924-GTPase activity (2)
GO:0003977-UDP-N-acetylglucosamine d ... (2)
GO:0004049-anthranilate synthase act ... (2)
GO:0004497-monooxygenase activity (2)
GO:0004853-uroporphyrinogen decarbox ... (2)
GO:0005525-GTP binding (2)
GO:0005618-cell wall (2)
GO:0005622-intracellular (2)
GO:0005773-vacuole (2)
GO:0006048-UDP-N-acetylglucosamine b ... (2)
GO:0006350-transcription (2)
GO:0006587-serotonin biosynthetic pr ... (2)

PO:0025034-leaf (26)
PO:0009025-vascular leaf (23)
PO:0009047-stem (17)
PO:0020104-leaf sheath (17)
PO:0001054-4 leaf senescence stage (16)
PO:0009005-root (15)
PO:0009049-inflorescence (15)
PO:0000003-whole plant (7)
PO:0009011-plant structure (6)
PO:0001050-leaf development stage (5)
PO:0007520-root development stage (3)
PO:0009088-seed coat (3)
PO:0000025-root tip (2)
PO:0001007-pollen development stage (2)
PO:0001083-inflorescence development ... (2)
PO:0007057-0 seed germination stage (2)
PO:0009010-seed (2)
PO:0000026-primary root tip (1)
PO:0000037-shoot apex (1)
PO:0000058-vegetative bud (1)
PO:0000293-guard cell (1)
PO:0001004-anther development stage (1)
PO:0001170-seed development stage (1)
PO:0004700-anther wall middle layer (1)
PO:0004709-axillary bud (1)
PO:0005360-aleurone layer (1)
PO:0007010-whole plant fruit ripenin ... (1)
PO:0007089-stem elongation stage (1)
PO:0008039-stem base (1)
PO:0009006-shoot system (1)
PO:0009009-plant embryo (1)
PO:0009037-lemma (1)
PO:0009039-glume (1)
PO:0009051-spikelet (1)
PO:0009053-peduncle (1)
PO:0009066-anther (1)
PO:0009071-anther wall tapetum (1)
PO:0009072-plant ovary (1)
PO:0009073-stigma (1)
PO:0009082-spikelet floret (1)
PO:0009089-endosperm (1)
PO:0020002-anther wall endothecium (1)
PO:0020025-micropyle (1)
PO:0020039-leaf lamina (1)
PO:0020048-microspore (1)
PO:0020105-ligule (1)
PO:0020106-leaf sheath auricle (1)
PO:0020122-inflorescence axis (1)
PO:0020138-leaf lamina vein (1)
PO:0020141-stem node (1)
PO:0020142-stem internode (1)
PO:0025281-pollen (1)
PO:0025374-seed dormant stage (1)
PO:0025477-floral organ primordium (1)
PO:0025480-shoot-borne root primordium (1)

TO:0000063-mimic response (95)
TO:0000175-bacterial blight disease ... (42)
TO:0000605-hydrogen peroxide content (40)
TO:0000207-plant height (38)
TO:0000074-blast disease (35)
TO:0000069-variegated leaf (19)
TO:0000249-leaf senescence (19)
TO:0000295-chlorophyll-b content (19)
TO:0000326-leaf color (19)
TO:0000293-chlorophyll-a content (18)
TO:0000495-chlorophyll content (18)
TO:0000075-light sensitivity (17)
TO:0000346-tiller number (15)
TO:0000455-seed set percent (15)
TO:0000496-carotenoid content (15)
TO:0000357-growth and development trait (13)
TO:0000259-heat tolerance (12)
TO:0000382-1000-seed weight (12)
TO:0002715-chloroplast development trait (12)
TO:0000040-panicle length (11)
TO:0000447-filled grain number (11)
TO:0002668-jasmonic acid content (11)
TO:0006001-salt tolerance (11)
TO:0000112-disease resistance (10)
TO:0000276-drought tolerance (9)
TO:0000303-cold tolerance (9)
TO:0000316-photosynthetic ability (9)
TO:0000615-abscisic acid sensitivity (9)
TO:0000460-light intensity sensitivity (8)
TO:0000255-sheath blight disease res ... (7)
TO:0000424-brown planthopper resistance (7)
TO:0000592-1000-dehulled grain weight (7)
TO:0000734-grain length (7)
TO:0000137-days to heading (6)
TO:0000152-panicle number (6)
TO:0000172-jasmonic acid sensitivity (6)
TO:0000396-grain yield (6)
TO:0000401-plant growth hormone sens ... (6)
TO:0000432-temperature response trait (6)
TO:0001018-transpiration rate (6)
TO:0001027-net photosynthetic rate (6)
TO:0002657-oxidative stress (6)
TO:0000148-viral disease resistance (5)
TO:0000522-stomatal conductance (5)
TO:0002667-abscisic acid content (5)
TO:0000020-black streak dwarf virus ... (4)
TO:0000180-spikelet fertility (4)
TO:0000227-root length (4)
TO:0000325-soluble protein content (4)
TO:0000397-grain size (4)
TO:0000468-leaf blast disease resistance (4)
TO:0001015-photosynthetic rate (4)
TO:0002670-momilactone A content (4)
TO:0000158-red light sensitivity (3)
TO:0000163-auxin sensitivity (3)
TO:0000166-gibberellic acid sensitivity (3)
TO:0000167-cytokinin sensitivity (3)
TO:0000168-abiotic stress trait (3)
TO:0000173-ethylene sensitivity (3)
TO:0000221-glume color (3)
TO:0000266-chalky endosperm (3)
TO:0000298-chlorophyll ratio (3)
TO:0000371-yield trait (3)
TO:0000449-grain yield per plant (3)
TO:0000516-relative root length (3)
TO:0000655-leaf development trait (3)
TO:0002673-amino acid content (3)
TO:0002757-flag leaf length (3)
TO:0000011-nitrogen sensitivity (2)
TO:0000056-stem color (2)
TO:0000058-herbicide sensitivity (2)
TO:0000102-phosphorus sensitivity (2)
TO:0000145-internode length (2)
TO:0000179-biotic stress trait (2)
TO:0000196-amylose content (2)
TO:0000224-iron sensitivity (2)
TO:0000299-leaf lamina color (2)
TO:0000315-bacterial disease resistance (2)
TO:0000356-brown spot disease resistance (2)
TO:0000399-grain thickness (2)
TO:0000421-pollen fertility (2)
TO:0000439-fungal disease resistance (2)
TO:0000454-stem borer resistance (2)
TO:0000456-spikelet number (2)
TO:0000476-growth hormone content (2)
TO:0000547-primary branch number (2)
TO:0000590-grain weight (2)
TO:0000598-protein content (2)
TO:0000621-inflorescence development ... (2)
TO:0000656-root development trait (2)
TO:0002616-flowering time (2)
TO:0002637-leaf size (2)
TO:0002662-leaf rolling tolerance (2)
TO:0002674-tryptophan content (2)
TO:0002758-flag leaf lamina width (2)
TO:0002759-grain number (2)
TO:0006002-proline content (2)
TO:0006007-polysaccharide content (2)
TO:0000008-potassium sensitivity (1)
TO:0000010-magnesium sensitivity (1)

037_Tolerance and resistance - Lesio ... (105)
038_Tolerance and resistance - Disea ... (49)
040_Tolerance and resistance - Stres ... (36)
001_Biochemical character (31)
004_Vegetative organ - Leaf (27)
005_Vegetative organ - Culm (27)
023_Coloration - Chlorophyll (22)
043_Character as QTL - Yield and pro ... (19)
044_Character as QTL - Plant growth ... (14)
010_Reproductive organ - panicle (9)
008_Reproductive organ - Heading date (8)
006_Vegetative organ - Root (7)
039_Tolerance and resistance - Insec ... (7)
029_Seed - Morphological traits - Gr ... (5)
026_Seed - Morphological traits (2)
031_Seed - Physiological traits - Do ... (2)
042_Character as QTL - Grain quality (2)
009_Reproductive organ - Inflorescence (1)
011_Reproductive organ - Pollination ... (1)
016_Reproductive organ - Pollination ... (1)
018_Reproductive organ - Pollination ... (1)
025_Seed (1)
030_Seed - Physiological traits (1)
033_Seed - Physiological traits - St ... (1)
034_Seed - Physiological traits - Sh ... (1)
035_Seed - Physiological traits - Taste (1)
036_Tolerance and resistance (1)
045_Character as QTL - Germination (1)
051_Reproductive organ - Spikelet, f ... (1)

Rice Database Oryzabase

Gene - List

List of Gene