Gene - List

Keyword (e.g. Oshox*, Os01*,salt stress , salt AND stress more information)

List of Gene

You can further refine your search from the results list.

The top 100 Gene Ontology, Plant Ontology,Trait Ontology and Trait Class are being displayed.

Gene Ontology Plant Ontology Trait Ontology Trait Class

Click on the headings of each column to sort the data. By default, it is sorted by relevance.

Search Condition : Filter(traitClassFacetEn:035_Seed - Physiological traits - Taste)
69 Hit First Previous 1-50 51-69 Next Last All    Download ( You can download a maximum of 10000 lines.)
CGSNL
Gene
Symbol 		Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID MSU ID Mutant
Image
GHD7 Ghd2
Ghd7
OsGhd7
OsCCT26
OsCMF8
OsI
Ghd7/Hd4
Hd4
EH7-1/Hd4
Ghd7-0a
EH7-1
EH7/Ghd7
EH7
OsEH7
GLW7.1
OsGLW7.1
 HEADING DATE 7 heading date 7
"Grain number
plant height
and heading date7"
"GRAIN NUMBER
PLANT HEIGHT AND HEADING DATE 7"
CCT domain-containing gene 26
CCT (CO, CO-LIKE and TOC1) domain protein 26
CCT domain protein 26
CCT MOTIF FAMILY (CMF) gene 8
Early heading 7
"Grain Length
Width and Weight 7.1"
Grain height date 7
 7 Character as QTL - Yield and productivity
Reproductive organ - Heading date
Reproductive organ - Spikelet, flower, glume, awn
Seed - Morphological traits - Grain shape
Character as QTL - Plant growth activity
Character as QTL - Grain quality
Heterochrony
Seed - Physiological traits
Vegetative organ - Culm
Seed - Physiological traits - Storage substances
Seed - Physiological traits - Taste
 GO:0051171 - regulation of nitrogen compound metabolic process
GO:0009648 - photoperiodism
GO:0005985 - sucrose metabolic process
GO:0042128 - nitrate assimilation
GO:0010372 - positive regulation of gibberellin biosynthetic process
GO:0045848 - positive regulation of nitrogen utilization
GO:0006521 - regulation of cellular amino acid metabolic process
GO:0048579 - negative regulation of long-day photoperiodism, flowering
GO:0008643 - carbohydrate transport
GO:0048573 - photoperiodism, flowering
GO:0051781 - positive regulation of cell division
GO:0009416 - response to light stimulus
GO:0009740 - gibberellic acid mediated signaling
GO:0010229 - inflorescence development
GO:0007623 - circadian rhythm
GO:0030307 - positive regulation of cell growth
GO:0006109 - regulation of carbohydrate metabolic process
GO:0015770 - sucrose transport
GO:0006808 - regulation of nitrogen utilization
GO:0045892 - negative regulation of transcription, DNA-dependent
GO:0010109 - regulation of photosynthesis
GO:0009744 - response to sucrose stimulus
GO:0009745 - sucrose mediated signaling
 TO:0000621 - inflorescence development trait
TO:0000397 - grain size
TO:0000382 - 1000-seed weight
TO:0000734 - grain length
TO:0002653 - endosperm storage protein content
TO:0000590 - grain weight
TO:0002675 - gibberellic acid content
TO:0000266 - chalky endosperm
TO:0000469 - days to maturity
TO:0000456 - spikelet number
TO:0000229 - photoperiod sensitivity
TO:0000207 - plant height
TO:0000447 - filled grain number
TO:0000557 - secondary branch number
TO:0000050 - inflorescence branching
TO:0002759 - grain number
TO:0000011 - nitrogen sensitivity
TO:0000196 - amylose content
TO:0000396 - grain yield
TO:0000162 - seed quality
TO:0000152 - panicle number
TO:0000696 - starch content
TO:0000107 - endosperm storage protein-1 content
TO:0000109 - endosperm storage protein-2 content
TO:0000137 - days to heading
TO:0000019 - seedling height
TO:0000211 - gel consistency
TO:0002616 - flowering time
TO:0000710 - globulin protein content
TO:0000449 - grain yield per plant
TO:0000352 - plant dry weight
TO:0002680 - albumin content
TO:0000357 - growth and development trait
 PO:0001083 - inflorescence development stage
Os07g0261200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g15770.1
GIF1 gif1
CIN2
OsCIN2
OsGIF1
WB1
OsWB1
GIF1/OsCIN2
 GRAIN INCOMPLETE FILLING 1 grain incomplete filling 1
"Beta-fructofuranosidase
insoluble isoenzyme 2"
Sucrose hydrolase 2
Invertase 2
Cell wall beta-fructosidase 2
cell-wall invertase 2
White Belly 1
 4 Seed - Morphological traits
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Seed - Physiological traits - Taste
Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Seed - Morphological traits - Endosperm
 GO:0005987 - sucrose catabolic process
GO:0016787 - hydrolase activity
GO:0048046 - apoplast
GO:0051707 - response to other organism
GO:0016023 - cytoplasmic membrane-bounded vesicle
GO:0005986 - sucrose biosynthetic process
GO:0004564 - beta-fructofuranosidase activity
GO:0004575 - sucrose alpha-glucosidase activity
GO:0005618 - cell wall
GO:0005975 - carbohydrate metabolic process
GO:0009960 - endosperm development
 TO:0000696 - starch content
TO:0000734 - grain length
TO:0000097 - amylopectin content
TO:0000382 - 1000-seed weight
TO:0000447 - filled grain number
TO:0000456 - spikelet number
TO:0000328 - sucrose content
TO:0000391 - seed size
TO:0000455 - seed set percent
TO:0000300 - glucose content
TO:0000311 - invertase activity
TO:0000221 - glume color
TO:0002656 - starch grain shape
TO:0000146 - seed length
TO:0000149 - seed width
TO:0000304 - seed thickness
TO:0000162 - seed quality
TO:0000396 - grain yield
TO:0000397 - grain size
TO:0006005 - fructose content
TO:0000592 - 1000-dehulled grain weight
TO:0000196 - amylose content
TO:0000590 - grain weight
TO:0002661 - seed maturation
TO:0000266 - chalky endosperm
TO:0000575 - endosperm related trait
TO:0000487 - endosperm color
 PO:0005019 - carpel vascular system
PO:0009089 - endosperm
PO:0009084 - pericarp
PO:0007633 - endosperm development stage
PO:0006326 - inflorescence internode
PO:0000025 - root tip
Os04g0413500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g33740.1
BAD1 Badh1
badh1
BAD1
BADH1
OsBADH1
BADH
OsALDH10A5
ALDH10A5
 BETAINE ALDEHYDE DEHYDROGENASE 1 betaine aldehyde dehydrogenase 1
Aldehyde dehydrogenase 10A5
 4 Biochemical character
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Taste
 GO:0009409 - response to cold
GO:0009651 - response to salt stress
GO:0010728 - regulation of hydrogen peroxide biosynthetic process
GO:0009408 - response to heat
GO:0009416 - response to light stimulus
GO:0008802 - betaine-aldehyde dehydrogenase activity
GO:0009414 - response to water deprivation
GO:0010037 - response to carbon dioxide
GO:0005618 - cell wall
GO:0005777 - peroxisome
GO:0019285 - glycine betaine biosynthetic process from choline
GO:0009413 - response to flooding
 TO:0000075 - light sensitivity
TO:0000303 - cold tolerance
TO:0000276 - drought tolerance
TO:0000087 - aroma
TO:0000286 - submergence sensitivity
TO:0000259 - heat tolerance
TO:0006001 - salt tolerance
 Os04g0464200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g39020.1
AGPS1 OsAGPS1
APS1
OsAPS1
AGPsma
 ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1 ADP-glucose pyrophosphorylase small subunit 1
ADP-glucose Pyrophosphorylase small subunit 1
AGPase small subunit 1
Adenosine diphosphate glucose pyrophosphorylase
adenosine diphosphoglucose pyrophosphorylase
ADP-glucose pyrophosphorylase small unit 1
AGPase S1
glucose-1-phosphate adenylyl transferase large subunit
ADP-Glc pyrophosphorylase small subunit 1
AGPase small subunit 1
 9 Tolerance and resistance - Disease resistance
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
Biochemical character
 GO:0009408 - response to heat
GO:0009413 - response to flooding
GO:0009501 - amyloplast
GO:0009536 - plastid
GO:0009058 - biosynthetic process
GO:0019252 - starch biosynthetic process
GO:0016779 - nucleotidyltransferase activity
GO:0042742 - defense response to bacterium
GO:0008878 - glucose-1-phosphate adenylyltransferase activity
 TO:0000203 - bacterial leaf streak disease resistance
TO:0000266 - chalky endosperm
TO:0000259 - heat tolerance
TO:0000286 - submergence sensitivity
 PO:0020104 - leaf sheath
PO:0009089 - endosperm
PO:0007632 - seed maturation stage
PO:0009047 - stem
PO:0009066 - anther
PO:0004006 - mesophyll cell
PO:0025034 - leaf
PO:0009010 - seed
Os09g0298200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g12660.1
LOC_Os09g12660.2
LOX2 LOX-2
 LIPOXYGENASE 2 Seed - Physiological traits - Taste
 GO:0005506 - iron ion binding
GO:0005737 - cytoplasm
GO:0016165 - lipoxygenase activity
GO:0055114 - oxidation reduction
GO:0031408 - oxylipin biosynthetic process
GO:0051707 - response to other organism
GO:0009611 - response to wounding
 -
LOX1 LOX-1
 LIPOXYGENASE 1 Seed - Physiological traits - Taste
 GO:0055114 - oxidation reduction
GO:0005506 - iron ion binding
GO:0016165 - lipoxygenase activity
GO:0031408 - oxylipin biosynthetic process
 -
GW2 OsGW2
OsRING429
RING429
GNL44
OsGNL44
 GRAIN WEIGHT 2 GRAIN WIDTH AND WEIGHT2
Grain width 2
RING-type E3 ubiquitin ligase 429
GRAIN NUMBER AND LARGE GRAIN SIZE 44
 2 Character as QTL - Yield and productivity
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Taste
Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
 GO:0005737 - cytoplasm
GO:0030308 - negative regulation of cell growth
GO:0005634 - nucleus
GO:0005829 - cytosol
GO:0006109 - regulation of carbohydrate metabolic process
GO:0048480 - stigma development
GO:0016567 - protein ubiquitination
GO:0010498 - proteasomal protein catabolic process
GO:0051302 - regulation of cell division
GO:0080050 - regulation of seed development
GO:0016874 - ligase activity
GO:0008270 - zinc ion binding
 TO:0000382 - 1000-seed weight
TO:0000402 - grain width
TO:0002658 - starch grain synthesis
TO:0002653 - endosperm storage protein content
TO:0000409 - peak viscosity
TO:0000590 - grain weight
TO:0000374 - breakdown viscosity
TO:0000196 - amylose content
TO:0000097 - amylopectin content
TO:0000044 - stigma exsertion
TO:0000447 - filled grain number
TO:0000557 - secondary branch number
TO:0000396 - grain yield
TO:0000547 - primary branch number
TO:0000397 - grain size
TO:0000040 - panicle length
TO:0000211 - gel consistency
TO:0000734 - grain length
TO:0000391 - seed size
TO:0000487 - endosperm color
TO:0000266 - chalky endosperm
 PO:0001170 - seed development stage
PO:0005360 - aleurone layer
PO:0009005 - root
PO:0009049 - inflorescence
PO:0025034 - leaf
PO:0009066 - anther
Os02g0244100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g14720.2
LOC_Os02g14720.1
GT Gt(t)*
Gt
 HIGH GELATINIZATION TEMPERATURE High gelatinization temperature
 Seed - Physiological traits - Taste
 GO:0016051 - carbohydrate biosynthetic process
 TO:0000462 - gelatinization temperature
 PO:0009089 - endosperm
-
H(T)* H(t)*
Hcr
 HARDNESS OF COOKED RICE Hardness of cooked rice
 Seed - Physiological traits - Taste
 GO:0016051 - carbohydrate biosynthetic process
 TO:0000587 - endosperm quality
TO:0000489 - carbohydrate composition related trait
 PO:0009089 - endosperm
-
LOX3 Lox3*
lox3(t)
LOX-3
Lox3
OsLOX4
LOX4
 LIPOXYGENASE 3 Lipoxygenase3
Lipoxygenase 3
Lipoxygenase-3
Putative lipoxygenase 3
Lipoxygenase 4
 3 Seed - Physiological traits - Taste
 GO:0005506 - iron ion binding
GO:0031408 - oxylipin biosynthetic process
GO:0055114 - oxidation reduction
GO:0016165 - lipoxygenase activity
 TO:0000488 - seed composition based quality trait
 PO:0009010 - seed
Os03g0700400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g49350.1
SK1 Sk1
Fgr
 SCENTED KERNEL 1 Scented kernel1
Scented kernel 1
Scented kernel-1
 Seed - Physiological traits - Taste
 GO:0009698 - phenylpropanoid metabolic process
 TO:0000087 - aroma
 PO:0000003 - whole plant
PO:0009011 - plant structure
PO:0009010 - seed
-
D11 d11(d8)
dwf10
d8
D11/CYP724B1
d11
CYP724B1
GNS4
OsD11
PMM1
OsPMM1
PMM1/D11
NBG4
OsCPB1
CPB1
CPB1/D11
 DWARF SHINKANEAIKOKU OR NOHRIN 28 shinkaneaikoku or nohrin 28 dwarf
DWARF SHINKANEAIKOKU OR NOHRIN 28
OsDWARF11
dwarf-11
Cytochrome P450 724B1
Dwarf protein 11
cytochrome P450 CYP724B1
DWARF11
grain number and size on chromosome 4
Panicle Morphology Mutant 1
Notched Belly Grain 4
CLUSTERED PRIMARY BRANCH 1
 4 Tolerance and resistance - Disease resistance
Vegetative organ - Culm
Seed - Morphological traits - Grain shape
Character as QTL - Yield and productivity
Vegetative organ - Leaf
Reproductive organ - Heading date
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
Seed - Morphological traits
Reproductive organ - Inflorescence
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Panicle, Mode of branching
 GO:0009055 - electron carrier activity
GO:0004497 - monooxygenase activity
GO:0016021 - integral to membrane
GO:0008199 - ferric iron binding
GO:0007275 - multicellular organismal development
GO:0006879 - cellular iron ion homeostasis
GO:0016020 - membrane
GO:0016023 - cytoplasmic membrane-bounded vesicle
GO:0016132 - brassinosteroid biosynthetic process
GO:0009742 - brassinosteroid mediated signaling
GO:0009414 - response to water deprivation
GO:0051607 - defense response to virus
GO:0006826 - iron ion transport
GO:0055114 - oxidation reduction
GO:0009741 - response to brassinosteroid stimulus
GO:0022900 - electron transport chain
GO:0009826 - unidimensional cell growth
GO:0009647 - skotomorphogenesis
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 - heme binding
GO:0009753 - response to jasmonic acid stimulus
GO:0051512 - positive regulation of unidimensional cell growth
GO:0010029 - regulation of seed germination
GO:0048573 - photoperiodism, flowering
 TO:0000020 - black streak dwarf virus resistance
TO:0006032 - panicle size
TO:0000276 - drought tolerance
TO:0000641 - primary branch length
TO:0002730 - grain shape
TO:0002759 - grain number
TO:0000567 - tiller angle
TO:0000592 - 1000-dehulled grain weight
TO:0000484 - seed shape
TO:0002677 - brassinosteroid sensitivity
TO:0000455 - seed set percent
TO:0000456 - spikelet number
TO:0000137 - days to heading
TO:0000557 - secondary branch number
TO:0000172 - jasmonic acid sensitivity
TO:0000139 - grains per panicle
TO:0000396 - grain yield
TO:0000040 - panicle length
TO:0000145 - internode length
TO:0000207 - plant height
TO:0000391 - seed size
TO:0000206 - leaf angle
TO:0000329 - tillering ability
TO:0000346 - tiller number
TO:0002676 - brassinosteroid content
TO:0000371 - yield trait
TO:0000501 - spikelet weight
TO:0002616 - flowering time
TO:0000050 - inflorescence branching
TO:0002688 - leaf lamina joint bending
TO:0000402 - grain width
TO:0000397 - grain size
TO:0000052 - primary branching of inflorescence
TO:0000180 - spikelet fertility
TO:0000576 - stem length
TO:0000657 - spikelet anatomy and morphology trait
TO:0000547 - primary branch number
 PO:0006321 - primary inflorescence branch
PO:0020122 - inflorescence axis
PO:0009049 - inflorescence
PO:0009047 - stem
PO:0009010 - seed
PO:0020142 - stem internode
Os04g0469800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g39430.1
LOC_Os04g39430.2
image Id ( 6753 )
SK2(T)(SCL, FGR) sk2(t)(scl, fgr)
fgr
scl
BAD2
BADH2
sk2
OsBADH2
Badh2
badh2
Os2AP
BADH-2
OsALDH10A8
ALDH10A8
 SCENTED KERNEL 2 scented kernel2
scented kernel 2
fragrance
betaine-aldehyde dehydrogenase 2
betaine aldehyde dehydrogenase 2
scented kernel-2
betaine aldehyde dehydrogenase-2
Aldehyde dehydrogenase 10A8
 8 Biochemical character
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
 GO:0031456 - glycine betaine biosynthetic process
GO:0005777 - peroxisome
GO:0009698 - phenylpropanoid metabolic process
GO:0006950 - response to stress
GO:0008802 - betaine-aldehyde dehydrogenase activity
GO:0009651 - response to salt stress
GO:0009413 - response to flooding
GO:0019438 - aromatic compound biosynthetic process
GO:0042181 - ketone biosynthetic process
GO:0009507 - chloroplast
GO:0009536 - plastid
 TO:0006002 - proline content
TO:0000087 - aroma
TO:0006001 - salt tolerance
TO:0000605 - hydrogen peroxide content
TO:0002673 - amino acid content
TO:0002662 - leaf rolling tolerance
TO:0000516 - relative root length
TO:0000633 - relative total dry weight
TO:0000286 - submergence sensitivity
 PO:0000003 - whole plant
PO:0009010 - seed
PO:0009011 - plant structure
Os08g0424500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os08g32870.1
P5CS OsP5CS
P5CS1
OsP5CS1
OsALDH18B1
ALDH18B1
OsP5CS-1
P5CS-1
 P5C SYNTHETASE delta1-pyrroline-5-carboxylate synthetase
Delta-1-pyrroline-5-carboxylate synthetase
pyrroline-5-carboxylate synthetase
proline carboxylate synthase 1
Aldehyde dehydrogenase 18B1
 5 Tolerance and resistance - Stress tolerance
Character as QTL - Grain quality
Biochemical character
Seed - Physiological traits - Taste
 GO:0009408 - response to heat
GO:0009725 - response to hormone stimulus
GO:0006979 - response to oxidative stress
GO:0009269 - response to desiccation
GO:0009409 - response to cold
GO:0055114 - oxidation reduction
GO:0006970 - response to osmotic stress
GO:0010033 - response to organic substance
GO:0019438 - aromatic compound biosynthetic process
GO:0009737 - response to abscisic acid stimulus
GO:0009651 - response to salt stress
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity
GO:0004349 - glutamate 5-kinase activity
GO:0005524 - ATP binding
GO:0005737 - cytoplasm
GO:0006561 - proline biosynthetic process
GO:0009414 - response to water deprivation
 TO:0006002 - proline content
TO:0000276 - drought tolerance
TO:0006001 - salt tolerance
TO:0000507 - osmotic adjustment capacity
TO:0000303 - cold tolerance
TO:0002657 - oxidative stress
TO:0000095 - osmotic response sensitivity
TO:0000615 - abscisic acid sensitivity
TO:0000087 - aroma
TO:0000401 - plant growth hormone sensitivity
TO:0000259 - heat tolerance
 Os05g0455500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os05g38150.2
LOC_Os05g38150.1
SSI OsSSI
SSS 1
SSS1
SS1
OsSS1
SSSI
OsSSSI
OsSS1q6
SS1q6
 SOLUBLE STARCH SYNTHASE I Starch synthase-I
"Soluble starch synthase 1
chloroplastic/amyloplastic"
Starch synthase I
 6 Seed - Physiological traits - Taste
Biochemical character
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Storage substances
 GO:0009011 - starch synthase activity
GO:0009501 - amyloplast
GO:0009507 - chloroplast
GO:0009413 - response to flooding
GO:0019252 - starch biosynthetic process
 TO:0000011 - nitrogen sensitivity
TO:0000286 - submergence sensitivity
TO:0000134 - alkali digestion
TO:0000462 - gelatinization temperature
TO:0000488 - seed composition based quality trait
 PO:0009010 - seed
PO:0007632 - seed maturation stage
PO:0009089 - endosperm
PO:0025034 - leaf
Os06g0160700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g06560.1
ASA1 OASA1 (=ASA1)
OsASA1
OASA1
OASA1(D323N)
OASA1D
 ANTHRANILATE SYNTHASE ALPHA-SUBUNIT 1 anthranilate synthase alpha subunit 1
feedback-insensitive a subunit of rice AS
 3 Biochemical character
Vegetative organ - Leaf
Tolerance and resistance - Lesion mimic
Seed - Physiological traits - Storage substances
Seed - Physiological traits - Taste
 GO:0010150 - leaf senescence
GO:0004049 - anthranilate synthase activity
GO:0051955 - regulation of amino acid transport
GO:0000162 - tryptophan biosynthetic process
 TO:0000134 - alkali digestion
TO:0000249 - leaf senescence
TO:0000196 - amylose content
TO:0000266 - chalky endosperm
TO:0000696 - starch content
TO:0000063 - mimic response
TO:0000598 - protein content
TO:0000462 - gelatinization temperature
TO:0000409 - peak viscosity
 Os03g0826500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g61120.1
GAD3 OsGAD3
 GLUTAMATE DECARBOXYLASE glutamate decarboxylase 3
 3 Character as QTL - Grain quality
Biochemical character
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
 GO:0009449 - gamma-aminobutyric acid biosynthetic process
GO:0009651 - response to salt stress
GO:0007214 - gamma-aminobutyric acid signaling pathway
GO:0009408 - response to heat
GO:0004351 - glutamate decarboxylase activity
GO:0030170 - pyridoxal phosphate binding
GO:0046686 - response to cadmium ion
GO:0009409 - response to cold
GO:0009413 - response to flooding
GO:0009414 - response to water deprivation
GO:0005634 - nucleus
GO:0005829 - cytosol
GO:0006536 - glutamate metabolic process
 TO:0000259 - heat tolerance
TO:0000143 - relative biomass
TO:0002673 - amino acid content
TO:0000303 - cold tolerance
TO:0000087 - aroma
TO:0006001 - salt tolerance
TO:0000114 - flooding related trait
TO:0000276 - drought tolerance
TO:0006002 - proline content
TO:0000576 - stem length
TO:0000266 - chalky endosperm
 Os03g0236200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g13300.1
LCG1 SLRL2
OsSLRL2
OsGRAS-30
OsGRAS30
GRAS-30
GRAS30
OsLCG1
 LESS CHALK GRAIN 1 SLR1-like2
GRAS protein 30
SLENDER RICE LIKE 2
Less Chalk Grain1
 5 Character as QTL - Germination
Seed - Physiological traits - Dormancy
Tolerance and resistance - Disease resistance
Vegetative organ - Leaf
Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Seed - Physiological traits - Taste
Vegetative organ - Culm
Other
 GO:0010162 - seed dormancy
GO:0009740 - gibberellic acid mediated signaling
GO:0006350 - transcription
GO:0009738 - abscisic acid mediated signaling
GO:0010029 - regulation of seed germination
GO:0046890 - regulation of lipid biosynthetic process
GO:0010581 - regulation of starch biosynthetic process
GO:0032885 - regulation of polysaccharide biosynthetic process
GO:0016020 - membrane
GO:0045449 - regulation of transcription
GO:0009737 - response to abscisic acid stimulus
GO:0010468 - regulation of gene expression
GO:0005634 - nucleus
GO:0003677 - DNA binding
GO:0048623 - seed germination on parent plant
GO:0050832 - defense response to fungus
 TO:0000162 - seed quality
TO:0002653 - endosperm storage protein content
TO:0000615 - abscisic acid sensitivity
TO:0002694 - fruit flavor trait
TO:0000074 - blast disease
TO:0000097 - amylopectin content
TO:0002758 - flag leaf lamina width
TO:0000196 - amylose content
TO:0000207 - plant height
TO:0000211 - gel consistency
TO:0000412 - setback viscosity
TO:0000696 - starch content
TO:0000266 - chalky endosperm
TO:0000253 - seed dormancy
TO:0000409 - peak viscosity
TO:0000619 - vivipary
TO:0002656 - starch grain shape
TO:0002658 - starch grain synthesis
TO:0000374 - breakdown viscosity
TO:0000557 - secondary branch number
TO:0000604 - fat and essential oil content
 PO:0009010 - seed
PO:0001170 - seed development stage
PO:0009084 - pericarp
Os05g0574900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os05g49930.1
_ _ zinc knuckle family protein
 8 Seed - Physiological traits - Taste
 TO:0002694 - fruit flavor trait
 - LOC_Os08g30550.1
_ GADPH
OsGAPDHB
GAPDHB
OsGAPB
GAPB
 _ glyceraldehyde-3-phosphate dehydrogenase
chloroplastic glyceraldehyde-3-phosphate dehydrogenase B
chloroplastic GAPDH B subunit
beta subunit of glyceraldehyde-3-phosphate dehydrogenase
beta subunit of GAPDH
 3 Seed - Physiological traits - Taste
Biochemical character
Tolerance and resistance - Stress tolerance
 GO:0050661 - NADP or NADPH binding
GO:0051287 - NAD or NADH binding
GO:0009642 - response to light intensity
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0006006 - glucose metabolic process
GO:0019685 - photosynthesis, dark reaction
 TO:0000495 - chlorophyll content
TO:0000442 - plant fresh weight
TO:0000087 - aroma
TO:0000460 - light intensity sensitivity
 Os03g0129300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g03720.1
LOC_Os03g03720.2
ODCB ODCb
OsODC3
ODC3
OsODC1
ODC1
OsODC
ODC
 ORNITHINE DECARBOXYLASE B Ornithine decarboxylase b
ornithine decarboxylase 3
 2 Biochemical character
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
 GO:0019438 - aromatic compound biosynthetic process
GO:0003824 - catalytic activity
GO:0006596 - polyamine biosynthetic process
GO:0009651 - response to salt stress
GO:0042181 - ketone biosynthetic process
 TO:0000087 - aroma
TO:0006001 - salt tolerance
 Os02g0482400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g28110.1
ALDH18B2 P5CS2
OsP5CS2
OsALDH18B2
 ALDEHYDE DEHYDROGENASE 18B2 pyrroline-5-carboxylate synthetase 2
proline carboxylate synthase 2
Aldehyde dehydrogenase 18B2
 1 Biochemical character
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
 GO:0009408 - response to heat
GO:0009651 - response to salt stress
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity
GO:0009507 - chloroplast
GO:0009610 - response to symbiotic fungus
GO:0042538 - hyperosmotic salinity response
GO:0009409 - response to cold
GO:0006970 - response to osmotic stress
GO:0004349 - glutamate 5-kinase activity
GO:0009737 - response to abscisic acid stimulus
GO:0009793 - embryonic development ending in seed dormancy
GO:0009414 - response to water deprivation
GO:0006561 - proline biosynthetic process
GO:0048364 - root development
GO:0009269 - response to desiccation
GO:0016020 - membrane
GO:0006979 - response to oxidative stress
 TO:0000303 - cold tolerance
TO:0000087 - aroma
TO:0006002 - proline content
TO:0000095 - osmotic response sensitivity
TO:0000276 - drought tolerance
TO:0006001 - salt tolerance
TO:0002657 - oxidative stress
TO:0000507 - osmotic adjustment capacity
TO:0000259 - heat tolerance
 PO:0025281 - pollen
Os01g0848200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g62900.1
NAC42 OsNAC42
ONAC042
ONAC42
ONAC051
ONAC51
OsNTL4
NTL4
 NAC DOMAIN-CONTAINING PROTEIN 42 NAC domain-containing protein 042
NAC domain-containing protein 42
NAC domain-containing protein 51
NAC membrane-bound transcription factor 4
NAC MTF4
 9 Seed - Physiological traits - Taste
Other
Seed - Physiological traits - Storage substances
Character as QTL - Grain quality
Character as QTL - Plant growth activity
Character as QTL - Yield and productivity
Tolerance and resistance - Stress tolerance
 GO:0048366 - leaf development
GO:0009651 - response to salt stress
GO:0009408 - response to heat
GO:0009409 - response to cold
GO:0009414 - response to water deprivation
GO:0003677 - DNA binding
GO:0006355 - regulation of transcription, DNA-dependent
 TO:0002694 - fruit flavor trait
TO:0000259 - heat tolerance
TO:0000655 - leaf development trait
TO:0006001 - salt tolerance
TO:0000011 - nitrogen sensitivity
TO:0000276 - drought tolerance
TO:0002653 - endosperm storage protein content
TO:0000162 - seed quality
TO:0000303 - cold tolerance
TO:0000396 - grain yield
TO:0000696 - starch content
TO:0000196 - amylose content
TO:0000207 - plant height
TO:0002759 - grain number
TO:0000040 - panicle length
TO:0000449 - grain yield per plant
TO:0000266 - chalky endosperm
TO:0000109 - endosperm storage protein-2 content
TO:0000152 - panicle number
TO:0000447 - filled grain number
TO:0000137 - days to heading
TO:0000455 - seed set percent
 PO:0001050 - leaf development stage
Os09g0493700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g32040.1
O3 OsbZIP60
bZIP60
 OPAQUE 3 b-ZIP transcription factor 60
OPAQUE3
OsbZIP60-like
 7 Character as QTL - Grain quality
Tolerance and resistance - Stress tolerance
Other
Seed - Physiological traits - Taste
Seed - Physiological traits - Storage substances
Seed - Morphological traits - Grain shape
Seed - Morphological traits - Endosperm
 GO:0034976 - response to endoplasmic reticulum stress
GO:0030968 - endoplasmic reticulum unfolded protein response
GO:0019438 - aromatic compound biosynthetic process
GO:0042594 - response to starvation
GO:0009960 - endosperm development
GO:0048316 - seed development
GO:0010431 - seed maturation
GO:0010581 - regulation of starch biosynthetic process
GO:0005783 - endoplasmic reticulum
GO:0005634 - nucleus
GO:0051223 - regulation of protein transport
GO:0070613 - regulation of protein processing
GO:0009408 - response to heat
GO:0043565 - sequence-specific DNA binding
GO:0006986 - response to unfolded protein
GO:0003700 - transcription factor activity
 TO:0000590 - grain weight
TO:0000351 - zinc sensitivity
TO:0000087 - aroma
TO:0000397 - grain size
TO:0000196 - amylose content
TO:0000259 - heat tolerance
TO:0000107 - endosperm storage protein-1 content
TO:0000109 - endosperm storage protein-2 content
TO:0000104 - floury endosperm
TO:0000487 - endosperm color
TO:0000653 - seed development trait
TO:0002653 - endosperm storage protein content
TO:0000598 - protein content
TO:0000696 - starch content
TO:0000432 - temperature response trait
 PO:0009049 - inflorescence
PO:0025034 - leaf
PO:0001170 - seed development stage
PO:0009010 - seed
PO:0007633 - endosperm development stage
PO:0007632 - seed maturation stage
Os07g0644100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g44950.1
NGR5 ERF142
OsERF#142
OsERF142
AP2/EREBP#049
AP2/EREBP49
SMOS1
OsSMOS1
SHB
OsAP2-EREBP-049
RLA1
RLA1/SMOS1
OsERF142/SMOS1
OsNGR5
GR5
OsGR5
 NITROGEN-MEDIATED TILLER GROWTH RESPONSE 5 ethylene response factor 142
APETALA2/ethylene-responsive element binding protein 49
small organ size1
small organ size 1
SHOEBOX
shoebox
reduced leaf angle1
reduced leaf angle 1
GRAIN ROUND 5
 5 Vegetative organ - Leaf
Character as QTL - Yield and productivity
Other
Seed - Morphological traits - Grain shape
Seed - Physiological traits - Taste
Vegetative organ - Root
Character as QTL - Grain quality
Seed - Physiological traits - Storage substances
Vegetative organ - Culm
 GO:0009734 - auxin mediated signaling pathway
GO:0010928 - regulation of auxin mediated signaling pathway
GO:0000226 - microtubule cytoskeleton organization
GO:0009755 - hormone-mediated signaling
GO:0009826 - unidimensional cell growth
GO:0006808 - regulation of nitrogen utilization
GO:0003677 - DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0006351 - transcription, DNA-dependent
GO:0009845 - seed germination
GO:0001558 - regulation of cell growth
GO:0042127 - regulation of cell proliferation
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0009937 - regulation of gibberellic acid mediated signaling
GO:0009744 - response to sucrose stimulus
GO:0010581 - regulation of starch biosynthetic process
GO:0009742 - brassinosteroid mediated signaling
GO:0009741 - response to brassinosteroid stimulus
GO:0008283 - cell proliferation
GO:0016049 - cell growth
 TO:0002730 - grain shape
TO:0002684 - plant cell size
TO:0000163 - auxin sensitivity
TO:0000374 - breakdown viscosity
TO:0000412 - setback viscosity
TO:0000397 - grain size
TO:0002677 - brassinosteroid sensitivity
TO:0000409 - peak viscosity
TO:0002653 - endosperm storage protein content
TO:0002694 - fruit flavor trait
TO:0002656 - starch grain shape
TO:0002658 - starch grain synthesis
TO:0000266 - chalky endosperm
TO:0000399 - grain thickness
TO:0000196 - amylose content
TO:0000382 - 1000-seed weight
TO:0000734 - grain length
TO:0000206 - leaf angle
TO:0000207 - plant height
TO:0001035 - stem width
TO:0000011 - nitrogen sensitivity
TO:0000346 - tiller number
TO:0000402 - grain width
TO:0002602 - pistil size
TO:0002601 - stamen size
TO:0000391 - seed size
TO:0000329 - tillering ability
TO:0000371 - yield trait
TO:0000547 - primary branch number
TO:0000227 - root length
TO:0002637 - leaf size
TO:0000040 - panicle length
TO:0002692 - root meristem development
TO:0000211 - gel consistency
 PO:0007057 - 0 seed germination stage
PO:0006085 - root meristem
PO:0009047 - stem
PO:0007527 - 2 root meristem formation stage
PO:0009049 - inflorescence
Os05g0389000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os05g32270.2
LOC_Os05g32270.1
qGC-2-1(t) (qGC-2) qGC-2-1(t) (qGC-2)
 gel consistency (QTL)-2-1(t) gel consistency (QTL)-2-1(t)
 2 Seed - Physiological traits - Taste
 -
qGC-7 qGC-7
 gel consistency (QTL)-7 gel consistency (QTL)-7
 Seed - Physiological traits - Taste
 -
qASS-6-1(t) qASS-6-1(t)
 alkali spreading score (QTL)-6-1(t) alkali spreading score (QTL)-6-1(t)
 6 Seed - Physiological traits - Taste
 -
qPGWC-8 qPGWC-8
 white core grain percentage (QTL)-8 white core grain percentage (QTL)-8
 Seed - Physiological traits - Taste
 -
qPGWC-12 qPGWC-12
 white core grain percentage (QTL)-12 white core grain percentage (QTL)-12
 Seed - Physiological traits - Taste
 -
qSWC-3 qSWC-3
 square of white core (QTL)-3 square of white core (QTL)-3
 Seed - Physiological traits - Taste
 -
qPKV-2 qPKV-2
 peak viscosity (QTL)-2 peak viscosity (QTL)-2
 Seed - Physiological traits - Taste
 -
qPKV-12 qPKV-12
 peak viscosity (QTL)-12 peak viscosity (QTL)-12
 Seed - Physiological traits - Taste
 -
qHPV-6-1 qHPV-6-1
 hot paste viscosity (QTL)-6-1 hot paste viscosity (QTL)-6-1
 Seed - Physiological traits - Taste
 -
qHPV-6-2 qHPV-6-2
 hot paste viscosity (QTL)-6-2 hot paste viscosity (QTL)-6-2
 Seed - Physiological traits - Taste
 -
qCPV-6-1 qCPV-6-1
 cold paste viscosity (QTL)-6-1 cold paste viscosity (QTL)-6-1
 Seed - Physiological traits - Taste
 -
qCPV-6-2 qCPV-6-2
 cold paste viscosity (QTL)-6-2 cold paste viscosity (QTL)-6-2
 Seed - Physiological traits - Taste
 -
qCPV-1 qCPV-1
 cold paste viscosity (QTL)-1 cold paste viscosity (QTL)-1
 Seed - Physiological traits - Taste
 -
qBDV-7 qBDV-7
 breakdown viscosity (QTL)-7 breakdown viscosity (QTL)-7
 Seed - Physiological traits - Taste
 -
qBDV-1 qBDV-1
 breakdown viscosity (QTL)-1 breakdown viscosity (QTL)-1
 Seed - Physiological traits - Taste
 -
qBDV-5 qBDV-5
 breakdown viscosity (QTL)-5 breakdown viscosity (QTL)-5
 Seed - Physiological traits - Taste
 -
qBDV-6 qBDV-6
 breakdwon viscosity (QTL)-6 breakdwon viscosity (QTL)-6
 Seed - Physiological traits - Taste
 -
qBDV-12 qBDV-12
 breakdown viscosity (QTL)-12 breakdown viscosity (QTL)-12
 Seed - Physiological traits - Taste
 -
qCSV-1 qCSV-1
 consistency viscosity (QTL)-1 consistency viscosity (QTL)-1
 Seed - Physiological traits - Taste
 -
qCSV-6-2 qCSV-6-2
 consistency viscosity (QTL)-6-2 consistency viscosity (QTL)-6-2
 Seed - Physiological traits - Taste
 -
qCSV-6-1 qCSV-6-1
 consistency viscosity (QTL)-6-1 consistency viscosity (QTL)-6-1
 Seed - Physiological traits - Taste
 -
qCSV-7 qCSV-7
 consistency viscosity (QTL)-7 consistency viscosity (QTL)-7
 Seed - Physiological traits - Taste
 -
qSBV-1 qSBV-1
 setback viscosity (QTL)-1 setback viscosity (QTL)-1
 Seed - Physiological traits - Taste
 -
qSBV-5-1 qSBV-5-1
 setback viscosity (QTL)-5-1 setback viscosity (QTL)-5-1
 Seed - Physiological traits - Taste
 -
qSBV-5-2 qSBV-5-2
 setback viscosity (QTL)-5-2 setback viscosity (QTL)-5-2
 Seed - Physiological traits - Taste
 -
69 Hit First Previous 1-50 51-69 Next Last All
/rice/oryzabase