Gene - List

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List of Gene

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The top 100 Gene Ontology, Plant Ontology,Trait Ontology and Trait Class are being displayed.

Gene Ontology Plant Ontology Trait Ontology Trait Class

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Search Condition : Filter(traitClassFacetEn:035_Seed - Physiological traits - Taste)
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CGSNL
Gene
Symbol
Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID Mutant
Image
GT Gt(t)*
Gt
HIGH GELATINIZATION TEMPERATURE High gelatinization temperature
Seed - Physiological traits - Taste
GO:0016051 - carbohydrate biosynthetic process
TO:0000462 - gelatinization temperature
PO:0009089 - endosperm
-
H(T)* H(t)*
Hcr
HARDNESS OF COOKED RICE Hardness of cooked rice
Seed - Physiological traits - Taste
GO:0016051 - carbohydrate biosynthetic process
TO:0000489 - carbohydrate composition related trait
TO:0000587 - endosperm quality
PO:0009089 - endosperm
-
LOX3 Lox3*
lox3(t)
LOX-3
Lox3
OsLOX4
LOX4
LIPOXYGENASE 3 Lipoxygenase3
Lipoxygenase 3
Lipoxygenase-3
Putative lipoxygenase 3
Lipoxygenase 4
3 Seed - Physiological traits - Taste
GO:0005506 - iron ion binding
GO:0016165 - lipoxygenase activity
GO:0055114 - oxidation reduction
GO:0031408 - oxylipin biosynthetic process
TO:0000488 - seed composition based quality trait
PO:0009010 - seed
Os03g0700400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
SK1 Sk1
Fgr
SCENTED KERNEL 1 Scented kernel1
Scented kernel 1
Scented kernel-1
Seed - Physiological traits - Taste
GO:0009698 - phenylpropanoid metabolic process
TO:0000087 - aroma
PO:0000003 - whole plant
PO:0009010 - seed
PO:0009011 - plant structure
-
_ OsLTPL36
LTPL36
_ 3 Biochemical character
Seed
Seed - Morphological traits - Endosperm
Seed - Physiological traits - Storage substances
Seed - Physiological traits - Taste
Character as QTL - Yield and productivity
GO:0009790 - embryonic development
GO:0009845 - seed germination
GO:0048316 - seed development
TO:0000280 - seedling vigor
TO:0000382 - 1000-seed weight
TO:0000653 - seed development trait
TO:0000162 - seed quality
TO:0000180 - spikelet fertility
TO:0000266 - chalky endosperm
TO:0000604 - fat and essential oil content
TO:0000620 - embryo development trait
PO:0001170 - seed development stage
PO:0007631 - plant embryo stage
PO:0007057 - 0 seed germination stage
PO:0009088 - seed coat
PO:0005360 - aleurone layer
Os03g0369100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
AGPS1 OsAGPS1
APS1
OsAPS1
AGPsma
ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1 sativa ADP-glucose pyrophosphorylase small subunit 1
ADP-glucose Pyrophosphorylase small subunit 1
AGPase small subunit 1
Adenosine diphosphate glucose pyrophosphorylase
adenosine diphosphoglucose pyrophosphorylase
ADP-glucose pyrophosphorylase small unit 1
9 Biochemical character
Seed - Physiological traits - Taste
GO:0019252 - starch biosynthetic process
GO:0009501 - amyloplast
GO:0008878 - glucose-1-phosphate adenylyltransferase activity
GO:0009058 - biosynthetic process
GO:0016779 - nucleotidyltransferase activity
GO:0009536 - plastid
TO:0000266 - chalky endosperm
PO:0009089 - endosperm
Os09g0298200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
LOX2 LOX-2
LIPOXYGENASE 2 Seed - Physiological traits - Taste
GO:0016165 - lipoxygenase activity
GO:0005737 - cytoplasm
GO:0055114 - oxidation reduction
GO:0031408 - oxylipin biosynthetic process
GO:0051707 - response to other organism
GO:0009611 - response to wounding
GO:0005506 - iron ion binding
-
LOX1 LOX-1
LIPOXYGENASE 1 Seed - Physiological traits - Taste
GO:0031408 - oxylipin biosynthetic process
GO:0016165 - lipoxygenase activity
GO:0005506 - iron ion binding
GO:0055114 - oxidation reduction
-
qGC-2-1(t) (qGC-2) qGC-2-1(t) (qGC-2)
gel consistency (QTL)-2-1(t) gel consistency (QTL)-2-1(t)
2 Seed - Physiological traits - Taste
-
qGC-7 qGC-7
gel consistency (QTL)-7 gel consistency (QTL)-7
Seed - Physiological traits - Taste
-
qASS-6-1(t) qASS-6-1(t)
alkali spreading score (QTL)-6-1(t) alkali spreading score (QTL)-6-1(t)
6 Seed - Physiological traits - Taste
-
qPGWC-8 qPGWC-8
white core grain percentage (QTL)-8 white core grain percentage (QTL)-8
Seed - Physiological traits - Taste
-
qPGWC-12 qPGWC-12
white core grain percentage (QTL)-12 white core grain percentage (QTL)-12
Seed - Physiological traits - Taste
-
qSWC-3 qSWC-3
square of white core (QTL)-3 square of white core (QTL)-3
Seed - Physiological traits - Taste
-
qPKV-2 qPKV-2
peak viscosity (QTL)-2 peak viscosity (QTL)-2
Seed - Physiological traits - Taste
-
qPKV-12 qPKV-12
peak viscosity (QTL)-12 peak viscosity (QTL)-12
Seed - Physiological traits - Taste
-
qHPV-6-1 qHPV-6-1
hot paste viscosity (QTL)-6-1 hot paste viscosity (QTL)-6-1
Seed - Physiological traits - Taste
-
qHPV-6-2 qHPV-6-2
hot paste viscosity (QTL)-6-2 hot paste viscosity (QTL)-6-2
Seed - Physiological traits - Taste
-
qCPV-6-1 qCPV-6-1
cold paste viscosity (QTL)-6-1 cold paste viscosity (QTL)-6-1
Seed - Physiological traits - Taste
-
qCPV-6-2 qCPV-6-2
cold paste viscosity (QTL)-6-2 cold paste viscosity (QTL)-6-2
Seed - Physiological traits - Taste
-
qCPV-1 qCPV-1
cold paste viscosity (QTL)-1 cold paste viscosity (QTL)-1
Seed - Physiological traits - Taste
-
qBDV-7 qBDV-7
breakdown viscosity (QTL)-7 breakdown viscosity (QTL)-7
Seed - Physiological traits - Taste
-
qBDV-1 qBDV-1
breakdown viscosity (QTL)-1 breakdown viscosity (QTL)-1
Seed - Physiological traits - Taste
-
qBDV-5 qBDV-5
breakdown viscosity (QTL)-5 breakdown viscosity (QTL)-5
Seed - Physiological traits - Taste
-
qBDV-6 qBDV-6
breakdwon viscosity (QTL)-6 breakdwon viscosity (QTL)-6
Seed - Physiological traits - Taste
-
qBDV-12 qBDV-12
breakdown viscosity (QTL)-12 breakdown viscosity (QTL)-12
Seed - Physiological traits - Taste
-
qCSV-1 qCSV-1
consistency viscosity (QTL)-1 consistency viscosity (QTL)-1
Seed - Physiological traits - Taste
-
qCSV-6-2 qCSV-6-2
consistency viscosity (QTL)-6-2 consistency viscosity (QTL)-6-2
Seed - Physiological traits - Taste
-
qCSV-6-1 qCSV-6-1
consistency viscosity (QTL)-6-1 consistency viscosity (QTL)-6-1
Seed - Physiological traits - Taste
-
qCSV-7 qCSV-7
consistency viscosity (QTL)-7 consistency viscosity (QTL)-7
Seed - Physiological traits - Taste
-
qSBV-1 qSBV-1
setback viscosity (QTL)-1 setback viscosity (QTL)-1
Seed - Physiological traits - Taste
-
qSBV-5-1 qSBV-5-1
setback viscosity (QTL)-5-1 setback viscosity (QTL)-5-1
Seed - Physiological traits - Taste
-
qSBV-5-2 qSBV-5-2
setback viscosity (QTL)-5-2 setback viscosity (QTL)-5-2
Seed - Physiological traits - Taste
-
qSBV-6 qSBV-6
setback viscosity (QTL)-6 setback viscosity (QTL)-6
Seed - Physiological traits - Taste
-
qGC-6-1(t) (GC) qGC-6-1(t) (GC)
gel consistency (QTL)-6-1(t) gel consistency (QTL)-6-1(t)
6 Seed - Physiological traits - Taste
-
qASS-3-1(t) (qASS-3) qASS-3-1(t) (qASS-3)
alkali spreading score (QTL)-3-1(t) alkali spreading score (QTL)-3-1(t)
3 Seed - Physiological traits - Taste
-
qASS-6-2(t) (qASS-6a) qASS-6-2(t) (qASS-6a)
alkali spreading score (QTL)-6-2(t) alkali spreading score (QTL)-6-2(t)
6 Seed - Physiological traits - Taste
-
qASS-6-3(t) (qASS-6b) qASS-6-3(t) (qASS-6b)
alkali spreading score (QTL)-6-3(t) alkali spreading score (QTL)-6-3(t)
6 Seed - Physiological traits - Taste
-
qGC-1-1(t) (qGC-1) qGC-1-1(t) (qGC-1)
gel consistency (QTL)-1-1(t) gel consistency (QTL)-1-1(t)
1 Seed - Physiological traits - Taste
-
qGC-2-2(t) (qGC-2a) qGC-2-2(t) (qGC-2a)
gel consistency (QTL)-2-2(t) gel consistency (QTL)-2-2(t)
2 Seed - Physiological traits - Taste
-
qGC-2-3(t) (qGC-2b) qGC-2-3(t) (qGC-2b)
gel consistency (QTL)-2-3(t) gel consistency (QTL)-2-3(t)
2 Seed - Physiological traits - Taste
-
qGC-6-2(t) (qGC-6a) qGC-6-2(t) (qGC-6a)
gel consistency (QTL)-6-2(t) gel consistency (QTL)-6-2(t)
6 Seed - Physiological traits - Taste
-
qGC-6-3(t) (qGC-6b) qGC-6-3(t) (qGC-6b)
gel consistency (QTL)-6-3(t) gel consistency (QTL)-6-3(t)
6 Seed - Physiological traits - Taste
-
_ GADPH
OsGAPDHB
_ glyceraldehyde-3-phosphate dehydrogenase
chloroplastic glyceraldehyde-3-phosphate dehydrogenase B
chloroplastic GAPDH B subunit
3 Biochemical character
Seed - Physiological traits - Taste
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0051287 - NAD or NADH binding
GO:0006006 - glucose metabolic process
GO:0050661 - NADP or NADPH binding
TO:0000087 - aroma
Os03g0129300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
SK2(T)(SCL, FGR) sk2(t)(scl, fgr)
fgr
scl
BAD2
BADH2
sk2
OsBADH2
Badh2
badh2
Os2AP
BADH-2
OsALDH10A8
ALDH10A8
SCENTED KERNEL 2 scented kernel2
scented kernel 2
fragrance
betaine-aldehyde dehydrogenase 2
betaine aldehyde dehydrogenase 2
scented kernel-2
betaine aldehyde dehydrogenase-2
Aldehyde dehydrogenase 10A8
8 Biochemical character
Seed - Physiological traits - Taste
Tolerance and resistance - Stress tolerance
GO:0005777 - peroxisome
GO:0006950 - response to stress
GO:0008802 - betaine-aldehyde dehydrogenase activity
GO:0009413 - response to flooding
GO:0009507 - chloroplast
GO:0009536 - plastid
GO:0009698 - phenylpropanoid metabolic process
GO:0031456 - glycine betaine biosynthetic process
TO:0000087 - aroma
TO:0000286 - submergence sensitivity
PO:0000003 - whole plant
PO:0009010 - seed
PO:0009011 - plant structure
Os08g0424500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
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