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CGSNL
Gene
Symbol 		Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID MSU ID Mutant
Image
MEL1 mel1
OsMEL1
MEAL1
OsMEAL1
OsAGO5c
 MEIOSIS ARRESTED AT LEPTOTENE 1 MEIOSIS ARRESTED AT LEPTOTENE1
Protein argonaute MEL1
Protein MEIOSIS ARRESTED AT LEPTOTENE 1
 3 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0010152 - pollen maturation
GO:0009555 - pollen development
GO:0048236 - plant-type spore development
GO:0035197 - siRNA binding
GO:0009561 - megagametogenesis
GO:0003676 - nucleic acid binding
GO:0033169 - histone H3-K9 demethylation
GO:0045836 - positive regulation of meiosis
GO:0006396 - RNA processing
GO:0007281 - germ cell development
GO:0005730 - nucleolus
GO:0005731 - nucleolus organizer region
GO:0005737 - cytoplasm
GO:0031047 - gene silencing by RNA
GO:0055046 - microgametogenesis
GO:0005739 - mitochondrion
GO:0007140 - male meiosis
GO:0007143 - female meiosis
 TO:0000729 - meiotic cell cycle trait
TO:0000358 - female sterility
TO:0000053 - pollen sterility
TO:0000727 - sporogenesis
TO:0000353 - aborted at pollen maturity stage
TO:0000437 - male sterility
TO:0000436 - spikelet sterility
 PO:0000431 - megasporocyte
PO:0001016 - L mature pollen stage
PO:0000018 - ovule primordium
PO:0006014 - male archesporial cell
PO:0006015 - female archesporial cell
PO:0009066 - anther
PO:0007600 - floral organ differentiation stage
PO:0001007 - pollen development stage
PO:0020047 - microsporocyte
PO:0025277 - pollen sac
PO:0025202 - microsporangium
PO:0009049 - inflorescence
Os03g0800200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g58600.1
DLC1 RR24
OsRR24
Rrb2
Orr4
OsRR17
RR17
OsRRB2
RRB2
OsRR24/LEPTO1
OsLEPTO1
LEPTO1
OsDLC1
 DEFECTIVE LEPTOTENE CHROMOSOME 1 B-type response regulator 4
B-type RR 2
LEPTOTENE1
LEPTOTENE 1
Defective Leptotene Chromosome 1
 2 Reproductive organ - Pollination, fertilization, fertility - Sterility
Tolerance and resistance - Stress tolerance
Heterochrony
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0009737 - response to abscisic acid stimulus
GO:0009753 - response to jasmonic acid stimulus
GO:0009414 - response to water deprivation
GO:0045449 - regulation of transcription
GO:0000156 - two-component response regulator activity
GO:0000160 - two-component signal transduction system (phosphorelay)
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0005634 - nucleus
GO:0009554 - megasporogenesis
GO:0048653 - anther development
GO:0012501 - programmed cell death
GO:0009555 - pollen development
GO:0000237 - leptotene
GO:0009736 - cytokinin mediated signaling
GO:0051276 - chromosome organization
GO:0042138 - meiotic DNA double-strand break formation
GO:0052543 - callose deposition in cell wall
GO:0009409 - response to cold
GO:0009735 - response to cytokinin stimulus
 TO:0000303 - cold tolerance
TO:0000172 - jasmonic acid sensitivity
TO:0000276 - drought tolerance
TO:0000167 - cytokinin sensitivity
TO:0000485 - sterility related trait
TO:0000615 - abscisic acid sensitivity
 PO:0009013 - portion of meristem tissue
PO:0009049 - inflorescence
PO:0009047 - stem
PO:0025313 - tapetum
PO:0009009 - plant embryo
PO:0009005 - root
Os02g0182100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g08500.1
AGO18 OsAGO18
 ARGONAUTE 18 Protein argonaute 18
Argonaute18
 7 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Disease resistance
Other
 GO:0048232 - male gamete generation
GO:0009555 - pollen development
GO:0048229 - gametophyte development
GO:0031047 - gene silencing by RNA
GO:0003676 - nucleic acid binding
GO:0051607 - defense response to virus
GO:0007126 - meiosis
GO:0005739 - mitochondrion
 TO:0000148 - viral disease resistance
TO:0000437 - male sterility
 PO:0009066 - anther
Os07g0471300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g28850.1
TOP6A1 OsTOP6A1
OsSPO11-1
OsSPO11A
SPO11-1
 TOPOISOMERASE 6 SUBUNIT A1 topoisomerase 6 subunit A1
sporulation protein11-1
SPORULATION11-1
 3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Biochemical character
 GO:0009414 - response to water deprivation
GO:0003916 - DNA topoisomerase activity
GO:0042138 - meiotic DNA double-strand break formation
GO:0051026 - chiasma formation
GO:0003677 - DNA binding
GO:0007131 - reciprocal meiotic recombination
GO:0000706 - meiotic DNA double-strand break processing
GO:0005524 - ATP binding
GO:0005634 - nucleus
GO:0005694 - chromosome
GO:0009651 - response to salt stress
GO:0045143 - homologous chromosome segregation
GO:0007129 - synapsis
GO:0051321 - meiotic cell cycle
GO:0016853 - isomerase activity
GO:0034090 - maintenance of meiotic sister chromatid cohesion
 TO:0000485 - sterility related trait
 Os03g0752200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g54091.1
TOP6A2 OsTOP6A2
OsSpo11-2
OsSPO11-2
OsSPO11B
SPO11-2
 TOPOISOMERASE 6 SUBUNIT A2 topoisomerase 6 subunit A2
 8 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility
Biochemical character
 GO:0003916 - DNA topoisomerase activity
GO:0051321 - meiotic cell cycle
GO:0009651 - response to salt stress
GO:0007129 - synapsis
GO:0045143 - homologous chromosome segregation
GO:0007132 - meiotic metaphase I
GO:0009414 - response to water deprivation
 TO:0000485 - sterility related trait
 Os08g0156900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os08g06050.1
PAIR2 Pair2
OsPAIR2
OsASY1
 HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 2 Homologous pairing aberration in rice meiosis 2
 9 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0005634 - nucleus
GO:0000238 - zygotene
GO:0000228 - nuclear chromosome
GO:0007129 - synapsis
GO:0000237 - leptotene
GO:0009556 - microsporogenesis
GO:0009554 - megasporogenesis
 TO:0000729 - meiotic cell cycle trait
 PO:0000431 - megasporocyte
PO:0020047 - microsporocyte
Os09g0506800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g32930.3
LOC_Os09g32930.1
DMC1A OsDMC1A
OsDmc1A
Dmc1A
DMC1
OsDMC1
RiLIM15A
OsRad51
 MEIOTIC PROTEIN DMC1A MEIOTIC PROTEIN Dmc1A
DNA repair protein Rad51
 12 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0005524 - ATP binding
GO:0000733 - DNA strand renaturation
GO:0051321 - meiotic cell cycle
GO:0003684 - damaged DNA binding
GO:0043069 - negative regulation of programmed cell death
GO:0007129 - synapsis
GO:0007131 - reciprocal meiotic recombination
GO:0008094 - DNA-dependent ATPase activity
GO:0007126 - meiosis
GO:0000712 - resolution of meiotic joint molecules as recombinants
GO:0006310 - DNA recombination
GO:0006281 - DNA repair
GO:0005634 - nucleus
GO:0000707 - meiotic DNA recombinase assembly
GO:0000724 - double-strand break repair via homologous recombination
GO:0003677 - DNA binding
GO:0051026 - chiasma formation
GO:0005515 - protein binding
 TO:0000389 - nuclear mediated male sterility
TO:0000437 - male sterility
TO:0000599 - enzyme activity
 PO:0009004 - gametophyte
PO:0009049 - inflorescence
Os12g0143800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g04980.1
DMC1B OsDMC1B
OsDmc1B
Dmc1B
RiLIM15B
 MEIOTIC PROTEIN DMC1B MEIOTIC PROTEIN Dmc1B
 11 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility
 GO:0000724 - double-strand break repair via homologous recombination
GO:0006281 - DNA repair
GO:0007131 - reciprocal meiotic recombination
GO:0003677 - DNA binding
GO:0000733 - DNA strand renaturation
GO:0007126 - meiosis
GO:0007129 - synapsis
GO:0000712 - resolution of meiotic joint molecules as recombinants
GO:0005634 - nucleus
GO:0006310 - DNA recombination
GO:0000707 - meiotic DNA recombinase assembly
GO:0008094 - DNA-dependent ATPase activity
GO:0003684 - damaged DNA binding
GO:0005524 - ATP binding
GO:0051026 - chiasma formation
GO:0005515 - protein binding
 TO:0000485 - sterility related trait
TO:0000437 - male sterility
 PO:0009049 - inflorescence
Os11g0146800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g04954.1
GSL5 OsGSL5
OsSTA170
CalS5
OsCalS5
 BETA-1,3-GLUCANASE ACTIVITY 5 Oryza sativa callose synthase 5
callose synthase 5
Glucan Synthase-Like 5
 6 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Biochemical character
 GO:0051445 - regulation of meiotic cell cycle
GO:0009555 - pollen development
GO:0009409 - response to cold
GO:0070592 - cell wall polysaccharide biosynthetic process
GO:0051728 - cell cycle switching, mitotic to meiotic cell cycle
GO:0005886 - plasma membrane
GO:0000148 - 1,3-beta-glucan synthase complex
GO:0007129 - synapsis
GO:0010383 - cell wall polysaccharide metabolic process
GO:0051446 - positive regulation of meiotic cell cycle
GO:0016021 - integral to membrane
GO:0005911 - cell-cell junction
GO:0052543 - callose deposition in cell wall
GO:0003843 - 1,3-beta-glucan synthase activity
GO:0006075 - 1,3-beta-glucan biosynthetic process
GO:0007140 - male meiosis
GO:0009663 - plasmodesma organization
GO:0009556 - microsporogenesis
 TO:0000729 - meiotic cell cycle trait
TO:0000421 - pollen fertility
TO:0000639 - seed fertility
TO:0006007 - polysaccharide content
TO:0000303 - cold tolerance
TO:0000455 - seed set percent
 PO:0001008 - C callose wall formation in pollen mother cells stage
PO:0009066 - anther
PO:0025264 - anther locule
PO:0001007 - pollen development stage
Os06g0182300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g08380.1
PSS1 pss1
OsPSS1
 POLLEN SEMI-STERILITY 1 pollen semi-sterility 1
pollen semi-sterile 1
Pollen semi-sterility1
Pollen semisterility1
Pollen semisterility 1
 8 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility
 GO:0005524 - ATP binding
GO:0005871 - kinesin complex
GO:0007126 - meiosis
GO:0005874 - microtubule
GO:0007018 - microtubule-based movement
GO:0003777 - microtubule motor activity
GO:0005737 - cytoplasm
GO:0009901 - anther dehiscence
 TO:0000053 - pollen sterility
 Os08g0117000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os08g02380.1
LOC_Os08g02380.2
MEL2 OsMEL2
OsRING430
RING430
RRM1-209
OsRRM1-209
 MEIOSIS ARRESTED AT LEPTOTENE 2 MEIOSIS ARRESTED AT LEPTOTENE2
RING-type E3 ubiquitin ligase 430
RNA recognition motif domain protein 1-209
 12 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0003723 - RNA binding
GO:0005886 - plasma membrane
 Os12g0572800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g38460.1
AS as
 ASYNAPSIS 1 asynapsis1
asynapsis 1
asynapsis
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007129 - synapsis
 -
DS1 ds1
 DESYNAPSIS 1 desynapsis1
desynapsis 1
desynapsis-1
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS10 ds10(t)
ds10
 DESYNAPSIS 10 desynapsis10
desynapsis 10
desynapsis-10
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS11 ds11(t)
ds11
 DESYNAPSIS 11 desynapsis11
desynapsis 11
desynapsis-11
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS2 ds2(t)
ds2
 DESYNAPSIS 2 desynapsis2
desynapsis 2
desynapsis-2
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS4 ds4(t)
ds4
 DESYNAPSIS 4 desynapsis4
desynapsis 4
desynapsis-4
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS5 ds5(t)
ds5
 DESYNAPSIS 5 desynapsis5
desynapsis 5
desynapsis-5
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS6 ds6(t)
ds6
 DESYNAPSIS 6 desynapsis6
desynapsis 6
desynapsis-6
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS7 ds7(t)
ds7
 DESYNAPSIS 7 desynapsis7
desynapsis 7
desynapsis-7
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS8 ds8(t)
ds8
 DESYNAPSIS 8 desynapsis8
desynapsis 8
desynapsis-8
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS9 ds9(t)
ds9
 DESYNAPSIS 9 desynapsis9
desynapsis 9
desynapsis-9
 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
DS3 ds3(t)
ds3
 DESYNAPSIS 3 desynapsis3
desynapsis 3
desynapsis-3
 7 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007135 - meiosis II
 -
SHL2 shl2
SHL2
sh2
OsRDR6
RDR6
DEL
OsDEL
 SHOOTLESS 2 shootless 2
shootless-2
Probable RNA-dependent RNA polymerase SHL2
Protein SHOOTLESS 2
SHOOTLESS2
RNA-dependent RNA polymerase 6
rod-like lemma
DEGENERATED LEMMA
 1 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Seed - Morphological traits - Embryo
Character as QTL - Yield and productivity
Reproductive organ - Pollination, fertilization, fertility - Sterility
Tolerance and resistance - Disease resistance
Reproductive organ - Spikelet, flower, glume, awn
Vegetative organ - Shoot apical meristem(SAM)
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
 GO:0042742 - defense response to bacterium
GO:0009408 - response to heat
GO:0010229 - inflorescence development
GO:0010093 - specification of floral organ identity
GO:0051607 - defense response to virus
GO:0006950 - response to stress
GO:0009266 - response to temperature stimulus
GO:0009737 - response to abscisic acid stimulus
GO:0030422 - production of siRNA involved in RNA interference
GO:0031047 - gene silencing by RNA
GO:0003723 - RNA binding
GO:0003968 - RNA-directed RNA polymerase activity
GO:0005739 - mitochondrion
GO:0016246 - RNA interference
GO:0009888 - tissue development
GO:0009887 - organ morphogenesis
GO:0042138 - meiotic DNA double-strand break formation
GO:0006306 - DNA methylation
GO:0010492 - maintenance of shoot apical meristem identity
 TO:0000592 - 1000-dehulled grain weight
TO:0000040 - panicle length
TO:0000432 - temperature response trait
TO:0000567 - tiller angle
TO:0000164 - stress trait
TO:0002718 - awn anatomy and morphology trait
TO:0000259 - heat tolerance
TO:0000615 - abscisic acid sensitivity
TO:0000605 - hydrogen peroxide content
TO:0002730 - grain shape
TO:0000622 - flower development trait
TO:0000557 - secondary branch number
TO:0002759 - grain number
TO:0000175 - bacterial blight disease resistance
TO:0000148 - viral disease resistance
TO:0000621 - inflorescence development trait
TO:0000396 - grain yield
TO:0000657 - spikelet anatomy and morphology trait
TO:0000614 - lemma shape
TO:0000734 - grain length
TO:0000064 - embryo related trait
TO:0000975 - grain width
TO:0000402 - grain width
TO:0000455 - seed set percent
TO:0000274 - floret anatomy and morphology trait
TO:0000382 - 1000-seed weight
TO:0000485 - sterility related trait
TO:0000207 - plant height
 PO:0009051 - spikelet
PO:0009009 - plant embryo
PO:0009082 - spikelet floret
PO:0001083 - inflorescence development stage
PO:0020144 - apical meristem
Os01g0527600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g34350.1
image Id ( 6807 )
RAD rad
rad*
OsRAD
GEN1
OsGEN-L
OsGEN1
 REDUCED ADH ACTIVITY reduced ADH activity
Flap endonuclease GEN-like 1
Protein OsGEN-like
OsGEN-like
 9 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0000287 - magnesium ion binding
GO:0005634 - nucleus
GO:0004022 - alcohol dehydrogenase (NAD) activity
GO:0006281 - DNA repair
GO:0006330 - single-stranded DNA binding
GO:0000724 - double-strand break repair via homologous recombination
GO:0006260 - DNA replication
GO:0000712 - resolution of meiotic joint molecules as recombinants
GO:0007126 - meiosis
GO:0007130 - synaptonemal complex assembly
GO:0009555 - pollen development
GO:0006302 - double-strand break repair
GO:0048256 - flap endonuclease activity
GO:0009556 - microsporogenesis
GO:0003690 - double-stranded DNA binding
GO:0003697 - single-stranded DNA binding
 TO:0000437 - male sterility
TO:0000053 - pollen sterility
TO:0000060 - aborted uni-nucleate stage
 PO:0009005 - root
PO:0009025 - vascular leaf
PO:0020048 - microspore
PO:0009011 - plant structure
PO:0000003 - whole plant
Os09g0521900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g35000.1
CDC2-1 cdc2Os-1
CDC2Os-1
CDKA-1
CDKA;1
Orysa;CDKA;1
OsCDKA;1
cdc2Os1
Rcdc2-1
OsCDKA1
CDKA1
CDC20S-1
OsCDC20S-1
 CELL DIVISION CONTROL PROTEIN 2 HOMOLOG 1 Cell division control protein 2 homolog 1
Cyclin-dependent kinase A-1
 3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
Biochemical character
Vegetative organ - Root
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007126 - meiosis
GO:0008353 - RNA polymerase II carboxy-terminal domain kinase activity
GO:0009733 - response to auxin stimulus
GO:0006468 - protein amino acid phosphorylation
GO:0005524 - ATP binding
GO:0004693 - cyclin-dependent protein kinase activity
GO:0004674 - protein serine/threonine kinase activity
GO:0046685 - response to arsenic
GO:0048830 - adventitious root development
 TO:0000163 - auxin sensitivity
TO:0000031 - silicon sensitivity
TO:0000350 - cms-hl type
 PO:0020094 - plant egg cell
Os03g0118400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g02680.1
LOC_Os03g02680.2
LOC_Os03g02680.3
MSRMK2 OsMSRMK2
OsMAPK5
OsMAP1
OsMPK3
OsBIMK1
OsMAPK2
MPK5
BIMK1
MAPK2
MAPK5
MPK3
OsMPK5
OsMAPK3
OsMAPK5b
MAPK3
 MULTIPLE STRESS RESPONSIVE MAP KINASE 2 multiple stress responsive MAP kinase 2
Mitogen-activated protein kinase 5
MAP kinase 5
Benzothiadiazole-induced MAP kinase 1
BTH-induced MAPK 1
MAP kinase 2
Multiple stress-responsive MAP kinase 2
MAP kinase 3
 3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Disease resistance
Vegetative organ - Root
Character as QTL - Plant growth activity
Tolerance and resistance - Stress tolerance
Tolerance and resistance - Insect resistance
 GO:0009409 - response to cold
GO:0048364 - root development
GO:0031349 - positive regulation of defense response
GO:0000169 - activation of MAPK activity involved in osmosensory signaling pathway
GO:0009738 - abscisic acid mediated signaling
GO:0007126 - meiosis
GO:0002213 - defense response to insect
GO:0009733 - response to auxin stimulus
GO:0080136 - priming of cellular response to stress
GO:0009814 - defense response, incompatible interaction
GO:0010200 - response to chitin
GO:0042127 - regulation of cell proliferation
GO:0042742 - defense response to bacterium
GO:0005737 - cytoplasm
GO:0001666 - response to hypoxia
GO:0080027 - response to herbivore
GO:0005524 - ATP binding
GO:2000038 - regulation of stomatal complex development
GO:0009735 - response to cytokinin stimulus
GO:0009723 - response to ethylene stimulus
GO:0009867 - jasmonic acid mediated signaling pathway
GO:0009734 - auxin mediated signaling pathway
GO:0009651 - response to salt stress
GO:0010120 - camalexin biosynthetic process
GO:0009411 - response to UV
GO:0009611 - response to wounding
GO:0006979 - response to oxidative stress
GO:2000037 - regulation of stomatal complex patterning
GO:0006970 - response to osmotic stress
GO:0009413 - response to flooding
GO:0009737 - response to abscisic acid stimulus
GO:0051726 - regulation of cell cycle
GO:0000165 - MAPKKK cascade
GO:0016114 - terpenoid biosynthetic process
GO:0051302 - regulation of cell division
GO:0009414 - response to water deprivation
GO:0009617 - response to bacterium
GO:0042542 - response to hydrogen peroxide
GO:0004707 - MAP kinase activity
GO:0006468 - protein amino acid phosphorylation
GO:0009790 - embryonic development
GO:0006952 - defense response
GO:0009751 - response to salicylic acid stimulus
GO:0050832 - defense response to fungus
GO:0048481 - ovule development
GO:0009753 - response to jasmonic acid stimulus
 TO:0000173 - ethylene sensitivity
TO:0000286 - submergence sensitivity
TO:0000163 - auxin sensitivity
TO:0000175 - bacterial blight disease resistance
TO:0000112 - disease resistance
TO:0002660 - cytokinin content
TO:0002668 - jasmonic acid content
TO:0000303 - cold tolerance
TO:0000273 - armyworm resistance
TO:0000454 - stem borer resistance
TO:0000015 - oxygen sensitivity
TO:0000315 - bacterial disease resistance
TO:0006003 - oligosaccharide content
TO:0000172 - jasmonic acid sensitivity
TO:0002669 - diterpenoid phytoalexin content
TO:0000605 - hydrogen peroxide content
TO:0000276 - drought tolerance
TO:0006001 - salt tolerance
TO:0000357 - growth and development trait
TO:0000439 - fungal disease resistance
TO:0000074 - blast disease
TO:0000167 - cytokinin sensitivity
TO:0000615 - abscisic acid sensitivity
TO:0000160 - UV light sensitivity
TO:0000424 - brown planthopper resistance
 PO:0007520 - root development stage
Os03g0285800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g17700.1
HXK1 OsHXK1
 HEXOKINASE-1 Hexokinase 1
 7 Tolerance and resistance - Disease resistance
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Coloration - Chlorophyll
Biochemical character
Vegetative organ - Leaf
 GO:0007623 - circadian rhythm
GO:0050687 - negative regulation of defense response to virus
GO:0009555 - pollen development
GO:0051321 - meiotic cell cycle
GO:0019318 - hexose metabolic process
GO:0009646 - response to absence of light
GO:0006096 - glycolysis
GO:0004396 - hexokinase activity
GO:0005524 - ATP binding
GO:0043068 - positive regulation of programmed cell death
GO:0051607 - defense response to virus
GO:0009658 - chloroplast organization
GO:0009749 - response to glucose stimulus
GO:0042593 - glucose homeostasis
GO:0010150 - leaf senescence
 TO:0000605 - hydrogen peroxide content
TO:0000020 - black streak dwarf virus resistance
TO:0000326 - leaf color
TO:0000696 - starch content
TO:0002667 - abscisic acid content
TO:0000357 - growth and development trait
TO:0000300 - glucose content
TO:0000495 - chlorophyll content
TO:0000249 - leaf senescence
 PO:0009010 - seed
PO:0001054 - 4 leaf senescence stage
PO:0001007 - pollen development stage
PO:0009089 - endosperm
PO:0009029 - stamen
PO:0025034 - leaf
PO:0009047 - stem
PO:0007057 - 0 seed germination stage
Os07g0446800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g26540.1
COLD11 OsRAD51A1
RAD51A1
OsCOLD11
 CHILLING TOLERANCE DIVERGENCE 11 DNA repair protein RAD51A1
Radiation sensitivity 51A1
 11 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007131 - reciprocal meiotic recombination
GO:0007129 - synapsis
GO:0009555 - pollen development
GO:0003684 - damaged DNA binding
GO:0007130 - synaptonemal complex assembly
GO:0005524 - ATP binding
GO:0008094 - DNA-dependent ATPase activity
GO:0005634 - nucleus
GO:0006281 - DNA repair
GO:0051321 - meiotic cell cycle
GO:0009409 - response to cold
GO:0006302 - double-strand break repair
 TO:0000437 - male sterility
TO:0000303 - cold tolerance
 PO:0009049 - inflorescence
PO:0001007 - pollen development stage
Os11g0615800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g40150.1
RAD21-4 OsRad21-4
REC8
OsREC8
OsRAD21-4
 RAD21-4 PROTEIN Rad21-4 protein
RECombination 8
 5 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Biochemical character
 GO:0000228 - nuclear chromosome
GO:0003682 - chromatin binding
GO:0006302 - double-strand break repair
GO:0007062 - sister chromatid cohesion
GO:0000798 - nuclear cohesin complex
 Os05g0580500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os05g50410.2
LOC_Os05g50410.1
PAIR3 HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 3 10 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0009556 - microsporogenesis
GO:0009554 - megasporogenesis
GO:0000228 - nuclear chromosome
GO:0000238 - zygotene
GO:0007129 - synapsis
GO:0000237 - leptotene
GO:0005634 - nucleus
 Os10g0405500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os10g26560.1
SPO11-4 OsSPO11-4
OsSPO11D
 TOPOISOMERASE 6 SUBUNIT A sporulation protein11-4
 12 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0003916 - DNA topoisomerase activity
GO:0005694 - chromosome
GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity
GO:0006265 - DNA topological change
GO:0005524 - ATP binding
 TO:0000392 - sterility or fertility trait
 Os12g0622500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g42760.1
ZEP1 OsZEP1
 TANSVERSE FILAMENT 4 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007129 - synapsis
GO:0000795 - synaptonemal complex
GO:0007131 - reciprocal meiotic recombination
 Os04g0452500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g37960.1
RMC1 MER3
mer3
OsMER3
RCK
OsRCK
Os-MER3
 RICE MEIOTIC CROSSOVER 1 ZMM protein
ROCK-N-ROLLERS
 2 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0005524 - ATP binding
GO:0007131 - reciprocal meiotic recombination
GO:0003676 - nucleic acid binding
GO:0051026 - chiasma formation
GO:0007126 - meiosis
GO:0008026 - ATP-dependent helicase activity
 Os02g0617500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g40450.1
RPA1A OsRPA70a
OsRPA1a
RPA1a
 REPLICATION PROTEIN A 1A Replication protein A 70kDa subunit a
RPA70kDa subunit a
 2 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
 GO:0006260 - DNA replication
GO:0043247 - telomere maintenance in response to DNA damage
GO:0009220 - pyrimidine ribonucleotide biosynthetic process
GO:0045132 - meiotic chromosome segregation
GO:0009640 - photomorphogenesis
GO:0000724 - double-strand break repair via homologous recombination
GO:0042138 - meiotic DNA double-strand break formation
GO:0009909 - regulation of flower development
GO:0006281 - DNA repair
GO:0010332 - response to gamma radiation
GO:0007140 - male meiosis
GO:0009560 - embryo sac egg cell differentiation
GO:0006312 - mitotic recombination
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0009793 - embryonic development ending in seed dormancy
GO:0007062 - sister chromatid cohesion
GO:0046872 - metal ion binding
GO:0032204 - regulation of telomere maintenance
GO:0051026 - chiasma formation
GO:0000790 - nuclear chromatin
GO:0048232 - male gamete generation
GO:0007131 - reciprocal meiotic recombination
GO:0009845 - seed germination
GO:0003677 - DNA binding
GO:0043687 - post-translational protein modification
GO:0009933 - meristem structural organization
GO:0010228 - vegetative to reproductive phase transition
GO:0007141 - male meiosis I
GO:0010182 - sugar mediated signaling
GO:0019915 - lipid storage
GO:0050826 - response to freezing
GO:0016444 - somatic cell DNA recombination
GO:0010162 - seed dormancy
GO:0009555 - pollen development
GO:0016567 - protein ubiquitination
 Os02g0776800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g53680.1
RAD51A2 OsRad51A2
OsRAD51
 DNA REPAIR PROTEIN RAD51A2 12 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
 GO:0051321 - meiotic cell cycle
GO:0008094 - DNA-dependent ATPase activity
GO:0007129 - synapsis
GO:0005524 - ATP binding
GO:0006281 - DNA repair
GO:0010332 - response to gamma radiation
GO:0007130 - synaptonemal complex assembly
GO:0009555 - pollen development
GO:0006302 - double-strand break repair
GO:0007131 - reciprocal meiotic recombination
 TO:0000437 - male sterility
TO:0000161 - radiation response trait
 PO:0009049 - inflorescence
PO:0001007 - pollen development stage
Os12g0497300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g31370.1
SDS OsSDS
Orysa;SDS
 SOLO DANCERS 3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007126 - meiosis
GO:0051301 - cell division
GO:0000706 - meiotic DNA double-strand break processing
GO:0007049 - cell cycle
GO:0005634 - nucleus
GO:0000079 - regulation of cyclin-dependent protein kinase activity
 Os03g0225200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g12414.2
LOC_Os03g12414.1
ORC4 OsORC4
 ORIGIN RECOGNITION COMPLEX 4 origin recognition complex subunit 4
 1 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0005664 - nuclear origin of replication recognition complex
GO:0007126 - meiosis
GO:0005524 - ATP binding
GO:0006270 - DNA replication initiation
GO:0003688 - DNA replication origin binding
GO:0009744 - response to sucrose stimulus
 Os01g0683400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g49010.1
LOC_Os01g49010.2
CDC45-1 CDC45
OsCDC45
CDC45A
 CELL DIVISION CONTROL 45-1 12 Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0007126 - meiosis
GO:0006270 - DNA replication initiation
 Os12g0124700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g03130.1
BUI1 BUI1
FH5
FH5/BUI1
RMD
OsRMD
OsFH5
FH5/RMD
 BENT UPPERMOST INTERNODE 1 BENT UPPERMOST INTERNODE1
class II formin FH5
Rice Morphology Determinant
formin homology 5
Type II Formin FH5
forming family protein 5
FH2 protein 5
FH2 domain protein 5
rice morphology determinant1-1
 7 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Seed - Morphological traits - Grain shape
Tolerance and resistance - Stress tolerance
Vegetative organ - Culm
Vegetative organ - Root
 GO:0009941 - chloroplast envelope
GO:0009733 - response to auxin stimulus
GO:0051017 - actin filament bundle formation
GO:0009959 - negative gravitropism
GO:0060627 - regulation of vesicle-mediated transport
GO:0004721 - phosphoprotein phosphatase activity
GO:0009826 - unidimensional cell growth
GO:0030041 - actin filament polymerization
GO:0001578 - microtubule bundle formation
GO:0030036 - actin cytoskeleton organization
GO:0005886 - plasma membrane
GO:0032922 - circadian regulation of gene expression
GO:0001558 - regulation of cell growth
GO:0009416 - response to light stimulus
GO:0005737 - cytoplasm
GO:0007053 - spindle assembly involved in male meiosis
GO:0000226 - microtubule cytoskeleton organization
GO:0051125 - regulation of actin nucleation
GO:0009507 - chloroplast
GO:0051016 - barbed-end actin filament capping
GO:0008017 - microtubule binding
GO:0000902 - cell morphogenesis
GO:0003779 - actin binding
 TO:0000262 - panicle shape
TO:0000391 - seed size
TO:0000146 - seed length
TO:0000163 - auxin sensitivity
TO:0000421 - pollen fertility
TO:0002672 - auxin content
TO:0000547 - primary branch number
TO:0000075 - light sensitivity
TO:0000207 - plant height
TO:0002710 - root shape
TO:0000268 - inflorescence shape
TO:0000484 - seed shape
TO:0002693 - gravity response trait
TO:0000043 - root anatomy and morphology trait
TO:0002756 - shoot habit
 PO:0020132 - columella root cap cell
PO:0025034 - leaf
PO:0001009 - D pollen mother cell meiosis stage
Os07g0596300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g40520.1
LOC_Os07g40510.1
SIP2 OsSIP2
OsFIP
FIP
OsFIP37
FIP37
 SKIP INTERACTING PROTEIN 2 SKIP interacting protein 2
SKIPa-interacting protein 2
SKIPa-interacting protein 2
FKBP12 INTERACTING PROTEIN 37
 6 Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Seed - Morphological traits - Embryo
Tolerance and resistance - Disease resistance
 GO:0006396 - RNA processing
GO:0001510 - RNA methylation
GO:0048024 - regulation of nuclear mRNA splicing, via spliceosome
GO:0000278 - mitotic cell cycle
GO:0005634 - nucleus
GO:0005856 - cytoskeleton
GO:0009506 - plasmodesma
GO:0009790 - embryonic development
GO:0048236 - plant-type spore development
GO:0007276 - gamete generation
GO:0009556 - microsporogenesis
GO:0042742 - defense response to bacterium
GO:0050832 - defense response to fungus
GO:0009409 - response to cold
GO:0009651 - response to salt stress
GO:0009414 - response to water deprivation
GO:0009269 - response to desiccation
GO:0009611 - response to wounding
 TO:0000429 - salt sensitivity
TO:0000074 - blast disease
TO:0000346 - tiller number
TO:0000040 - panicle length
TO:0000485 - sterility related trait
TO:0000531 - anther length
TO:0000276 - drought tolerance
TO:0000439 - fungal disease resistance
TO:0000437 - male sterility
TO:0000303 - cold tolerance
TO:0000180 - spikelet fertility
TO:0000445 - seed number
TO:0000175 - bacterial blight disease resistance
TO:0000727 - sporogenesis
TO:0000315 - bacterial disease resistance
TO:0000620 - embryo development trait
TO:0000455 - seed set percent
 PO:0009010 - seed
PO:0020048 - microspore
PO:0025543 - tapetum cell
PO:0007631 - plant embryo stage
Os06g0474200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g27970.1
SGO1 OsSGO1
 SHUGOSHIN 1 shugoshin 1
SHUGOSHIN1
 2 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Other
 GO:0000775 - chromosome, centromeric region
GO:0005634 - nucleus
GO:0045132 - meiotic chromosome segregation
GO:0007126 - meiosis
GO:0007067 - mitosis
GO:0007130 - synaptonemal complex assembly
 Os02g0799100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g55570.1
NAC14 ONAC014
ONAC14
OsNAC14
NAC14
OsNAC68
NAC68
 NAC DOMAIN-CONTAINING PROTEIN 14 NAC domain-containing protein 014
NAC domain-containing protein 14
 1 Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Other
Character as QTL - Yield and productivity
 GO:0006808 - regulation of nitrogen utilization
GO:0042594 - response to starvation
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009414 - response to water deprivation
GO:0009651 - response to salt stress
GO:0009409 - response to cold
GO:0009737 - response to abscisic acid stimulus
GO:0003677 - DNA binding
GO:0031347 - regulation of defense response
GO:0006282 - regulation of DNA repair
GO:0080134 - regulation of response to stress
 TO:0006001 - salt tolerance
TO:0000615 - abscisic acid sensitivity
TO:0002759 - grain number
TO:0000153 - relative yield
TO:0000040 - panicle length
TO:0000011 - nitrogen sensitivity
TO:0000592 - 1000-dehulled grain weight
TO:0000371 - yield trait
TO:0000455 - seed set percent
TO:0000276 - drought tolerance
TO:0000303 - cold tolerance
 Os01g0675800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g48446.1
MLH1 OsMLH1
 MUTL-HOMOLOG 1 MutL-homolog 1
 1 Reproductive organ - Pollination, fertilization, fertility - Female sterility
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0030983 - mismatched DNA binding
GO:0032390 - MutLbeta complex
GO:0005712 - chiasma
GO:0016887 - ATPase activity
GO:0009553 - embryo sac development
GO:0007131 - reciprocal meiotic recombination
GO:0032407 - MutSalpha complex binding
GO:0006298 - mismatch repair
GO:0051321 - meiotic cell cycle
GO:0048229 - gametophyte development
GO:0005524 - ATP binding
GO:0003697 - single-stranded DNA binding
GO:0000795 - synaptonemal complex
GO:0048236 - plant-type spore development
GO:0032389 - MutLalpha complex
 TO:0000437 - male sterility
TO:0000358 - female sterility
 Os01g0958900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g72880.1
KU70 OsKu70
Ku70
 _ rice homolog of Ku70
Ku70 homolog
 7 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0006303 - double-strand break repair via nonhomologous end joining
GO:0006281 - DNA repair
GO:0032502 - developmental process
GO:0042162 - telomeric DNA binding
GO:0009408 - response to heat
GO:0006310 - DNA recombination
GO:0003684 - damaged DNA binding
GO:0005524 - ATP binding
GO:0004003 - ATP-dependent DNA helicase activity
GO:0003690 - double-stranded DNA binding
GO:0000723 - telomere maintenance
GO:0043564 - Ku70:Ku80 complex
 TO:0000168 - abiotic stress trait
TO:0000485 - sterility related trait
TO:0000357 - growth and development trait
 Os07g0184900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g08729.1
BRCA2 OsBRCA2
 BREAST CANCER 2 BRCA2 orthologue
breast cancer susceptibility protein type 2
 1 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Female sterility
 GO:0006302 - double-strand break repair
GO:0006310 - DNA recombination
GO:0007130 - synaptonemal complex assembly
GO:0007129 - synapsis
GO:0051321 - meiotic cell cycle
GO:0000237 - leptotene
GO:0000238 - zygotene
 TO:0000358 - female sterility
TO:0000729 - meiotic cell cycle trait
TO:0000437 - male sterility
 PO:0009039 - glume
PO:0009005 - root
PO:0025034 - leaf
PO:0009006 - shoot system
PO:0009066 - anther
Os01g0164800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g07110.1
MRE11 OsMRE11
Mre11
 MEIOTIC RECOMBINATION 11 Meiotic recombination 11
 4 Reproductive organ - Pollination, fertilization, fertility
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Vegetative organ - Culm
 GO:0048232 - male gamete generation
GO:0004519 - endonuclease activity
GO:0004527 - exonuclease activity
GO:0007126 - meiosis
GO:0006302 - double-strand break repair
GO:0005634 - nucleus
GO:0030145 - manganese ion binding
GO:0000278 - mitotic cell cycle
GO:0007292 - female gamete generation
GO:0051301 - cell division
GO:0006260 - DNA replication
GO:0006281 - DNA repair
GO:0007049 - cell cycle
GO:0051320 - S phase
GO:0006303 - double-strand break repair via nonhomologous end joining
GO:0000724 - double-strand break repair via homologous recombination
 TO:0000420 - fertility related trait
TO:0000357 - growth and development trait
TO:0000207 - plant height
TO:0000639 - seed fertility
 PO:0009047 - stem
PO:0009029 - stamen
PO:0009030 - carpel
PO:0020148 - shoot apical meristem
PO:0000025 - root tip
PO:0025034 - leaf
PO:0005052 - plant callus
PO:0009010 - seed
PO:0009005 - root
Os04g0635900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g54340.1
RAD51C OsRAD51C
OsRad51C
RAD51C-1
RAD51C-2
RAD51C-3
 DNA REPAIR PROTEIN RAD51C DNA repair protein RAD51C
Radiation sensitive51C
Radiation sensitive 51C
 1 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Female sterility
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0016444 - somatic cell DNA recombination
GO:0006302 - double-strand break repair
GO:0003677 - DNA binding
GO:0000724 - double-strand break repair via homologous recombination
GO:0010332 - response to gamma radiation
GO:0007143 - female meiosis
GO:0007140 - male meiosis
GO:0007131 - reciprocal meiotic recombination
GO:0005524 - ATP binding
GO:0045002 - double-strand break repair via single-strand annealing
GO:0000706 - meiotic DNA double-strand break processing
GO:0045003 - double-strand break repair via synthesis-dependent strand annealing
GO:0005694 - chromosome
GO:0008094 - DNA-dependent ATPase activity
 TO:0000161 - radiation response trait
 Os01g0578000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g39630.2
LOC_Os01g39630.1
RAD51D OsRAD51D
OsRad51D
OsRAD51D.1
OsRAD51D.2
OsRAD51D.3
 DNA REPAIR PROTEIN RAD51D DNA repair protein RAD51D
 9 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Sterility
Biochemical character
Reproductive organ - Spikelet, flower, glume, awn
 GO:0007126 - meiosis
GO:0000723 - telomere maintenance
GO:0010332 - response to gamma radiation
GO:0007130 - synaptonemal complex assembly
GO:0007129 - synapsis
GO:0022414 - reproductive process
GO:0006302 - double-strand break repair
GO:0045003 - double-strand break repair via synthesis-dependent strand annealing
GO:0045002 - double-strand break repair via single-strand annealing
 TO:0000161 - radiation response trait
TO:0000485 - sterility related trait
TO:0000225 - stamen number
TO:0000079 - lemma and palea anatomy and morphology trait
 Os09g0104200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g01680.1
LOC_Os09g01680.2
LOC_Os09g01680.3
RECQL4 OsRecQl4
RecQl4
OsMed34_1
Med34_1
RECQ4
OsRECQ4
 RECQ LIKE PROTEIN 4 RecQ like protein 4
Mediator 34_1
 4 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Biochemical character
 GO:0043140 - ATP-dependent 3'-5' DNA helicase activity
GO:0010520 - regulation of reciprocal meiotic recombination
GO:0006302 - double-strand break repair
GO:0045132 - meiotic chromosome segregation
GO:0006281 - DNA repair
GO:0006260 - DNA replication
 TO:0000392 - sterility or fertility trait
 Os04g0433800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g35420.1
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/rice/oryzabase