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CGSNL
Gene
Symbol 		Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID MSU ID Mutant
Image
MEL1 mel1
OsMEL1
MEAL1
OsMEAL1
OsAGO5c
 MEIOSIS ARRESTED AT LEPTOTENE 1 MEIOSIS ARRESTED AT LEPTOTENE1
Protein argonaute MEL1
Protein MEIOSIS ARRESTED AT LEPTOTENE 1
 3 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0010152 - pollen maturation
GO:0009555 - pollen development
GO:0048236 - plant-type spore development
GO:0035197 - siRNA binding
GO:0033169 - histone H3-K9 demethylation
GO:0009561 - megagametogenesis
GO:0006396 - RNA processing
GO:0007281 - germ cell development
GO:0005730 - nucleolus
GO:0005731 - nucleolus organizer region
GO:0005737 - cytoplasm
GO:0031047 - gene silencing by RNA
GO:0055046 - microgametogenesis
GO:0003676 - nucleic acid binding
GO:0045836 - positive regulation of meiosis
GO:0005739 - mitochondrion
GO:0007140 - male meiosis
GO:0007143 - female meiosis
 TO:0000353 - aborted at pollen maturity stage
TO:0000358 - female sterility
TO:0000727 - sporogenesis
TO:0000053 - pollen sterility
TO:0000729 - meiotic cell cycle trait
TO:0000437 - male sterility
TO:0000436 - spikelet sterility
 PO:0001007 - pollen development stage
PO:0009049 - inflorescence
PO:0000431 - megasporocyte
PO:0007600 - floral organ differentiation stage
PO:0025202 - microsporangium
PO:0025277 - pollen sac
PO:0009066 - anther
PO:0006015 - female archesporial cell
PO:0001016 - L mature pollen stage
PO:0000018 - ovule primordium
PO:0006014 - male archesporial cell
PO:0020047 - microsporocyte
Os03g0800200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os03g58600.1
TDR tdr
OsbHLH005
bHLH005
OsbHLH5
bhlh5
TDR1
OsTDR
OsTDR1
OsMYC5
MYC5
 TAPETUM DEGENERATION RETARDATION tapetum degeneration retardation
basic helix loop helix 5
basic/helix-loop-helix 5
Myelocytomatosis oncogene transcription factor 5
 2 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
 GO:0009555 - pollen development
GO:0009266 - response to temperature stimulus
GO:0010584 - pollen exine formation
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0048657 - tapetal cell differentiation
GO:0010234 - tapetal cell fate specification
GO:0030528 - transcription regulator activity
GO:0045449 - regulation of transcription
GO:0048653 - anther development
GO:0048658 - tapetal layer development
GO:0010208 - pollen wall assembly
GO:0003682 - chromatin binding
GO:0046983 - protein dimerization activity
GO:0000978 - RNA polymerase II regulatory transcription factor site sequence-specific DNA binding
GO:0006355 - regulation of transcription, DNA-dependent
GO:0048654 - anther morphogenesis
 TO:0000432 - temperature response trait
TO:0000437 - male sterility
TO:0000218 - pollen abortion type
 PO:0009066 - anther
PO:0001004 - anther development stage
PO:0009071 - anther wall tapetum
PO:0001007 - pollen development stage
PO:0009049 - inflorescence
Os02g0120500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g02820.1
UGP1 Ugp1
OsUgp1
UGP2
UGP3
 UDP-GLUCOSE PYROPHOSPHORYLASE 1 UDP-Glucose Pyrophosphorylase1
UDP-Glucose Pyrophosphorylase 1
UGPase 1
UGPase
UTP:glucose phosphate uridylyltransferase
 9 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
 GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity
GO:0009555 - pollen development
GO:0042545 - cell wall modification
GO:0010238 - response to proline
GO:0009651 - response to salt stress
GO:0005886 - plasma membrane
GO:0048653 - anther development
GO:0046686 - response to cadmium ion
GO:0016036 - cellular response to phosphate starvation
GO:0070592 - cell wall polysaccharide biosynthetic process
GO:0052543 - callose deposition in cell wall
 TO:0000437 - male sterility
TO:0000034 - chromium sensitivity
 PO:0001007 - pollen development stage
PO:0009082 - spikelet floret
PO:0025281 - pollen
PO:0001004 - anther development stage
Os09g0553200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os09g38030.1
LOC_Os09g38030.2
UGP2 Ugp2
OsUgp2
 UDP-GLUCOSE PYROPHOSPHORYLASE 2 UDP-Glucose Pyrophosphorylase2
UDP-Glucose Pyrophosphorylase 2
UDPGase 2
 2 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
 GO:0016779 - nucleotidyltransferase activity
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity
GO:0019252 - starch biosynthetic process
GO:0009555 - pollen development
 TO:0000696 - starch content
TO:0000421 - pollen fertility
 PO:0025395 - floral organ
PO:0001007 - pollen development stage
PO:0009066 - anther
PO:0025281 - pollen
Os02g0117700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g02560.1
WDA1 OsWDA1
Wda1
wda1
OS-CER1
OsGL1-5
OsCER1b
CER1b
 WAX-DEFICIENT ANTHER 1 Wax-deficient anther1
Wax-deficient anther 1
WDA1 protein
Glossy1-homologous gene 5
ECERIFERUM1b
 10 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
 GO:0043668 - exine
GO:0010025 - wax biosynthetic process
GO:0005783 - endoplasmic reticulum
GO:0048653 - anther development
GO:0010143 - cutin biosynthetic process
 TO:0000709 - leaf gloss
TO:0000531 - anther length
TO:0000723 - microsporocyte development trait
TO:0000187 - anther color
TO:0000214 - anther shape
TO:0000276 - drought tolerance
TO:0000245 - pollen free
 PO:0000022 - plant cuticle
PO:0009071 - anther wall tapetum
PO:0000032 - tetrad of microspores
PO:0000002 - anther wall
PO:0020091 - obsolete microgametophyte
PO:0009082 - spikelet floret
PO:0009036 - lodicule
PO:0009066 - anther
PO:0009073 - stigma
PO:0000282 - trichome
PO:0009051 - spikelet
Os10g0471100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os10g33250.3
LOC_Os10g33250.2
LOC_Os10g33250.1
AOX1A Ao1-1
AOX1a
OsAOX1a
AOX 1a
 ALTERNATIVE OXIDASE 1A alternative oxidase-1a
ubiquinol oxidase 1a
 4 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
Tolerance and resistance - Stress tolerance
 GO:0009408 - response to heat
GO:0009916 - alternative oxidase activity
GO:0005740 - mitochondrial envelope
GO:0070469 - respiratory chain
GO:0046872 - metal ion binding
GO:0022900 - electron transport chain
GO:0016491 - oxidoreductase activity
GO:0016021 - integral to membrane
GO:0007585 - respiratory gaseous exchange
 TO:0000432 - temperature response trait
TO:0000259 - heat tolerance
 PO:0000003 - whole plant
Os04g0600200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g51150.1
DCW11 DCW11
OsPP2C13
PP2C13
OsPP22
 DOWN-REGULATED GENE 11 Probable protein phosphatase 2C 13
protein phosphatase 2C 13
protein phosphatase 2C13
protein phosphatase 22
 2 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0004722 - protein serine/threonine phosphatase activity
GO:0008287 - protein serine/threonine phosphatase complex
GO:0006470 - protein amino acid dephosphorylation
GO:0000287 - magnesium ion binding
GO:0030145 - manganese ion binding
 Os02g0255100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g15594.1
ABI5 OsABI5
OsbZIP10
OsABF1
OREB1
OsABI5-1
OsABI5-2
OsOREB1
OREB1
 ABA INSENSITIVE 5 ABA Insensitive 5
bZIP-type transcription factor ABI5
bZIP transcription factors OsABI5
bZIP transcription factor 10
Abscisic acid insensitive 5
 1 Seed - Physiological traits - Storage substances
Seed - Morphological traits - Grain shape
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Seed - Physiological traits - Dormancy
Character as QTL - Germination
Character as QTL - Grain quality
Character as QTL - Yield and productivity
 GO:0009725 - response to hormone stimulus
GO:0010029 - regulation of seed germination
GO:0010162 - seed dormancy
GO:0045449 - regulation of transcription
GO:0009787 - regulation of abscisic acid mediated signaling
GO:0010581 - regulation of starch biosynthetic process
GO:0009737 - response to abscisic acid stimulus
GO:0045454 - cell redox homeostasis
GO:0005982 - starch metabolic process
GO:0006995 - cellular response to nitrogen starvation
GO:0005985 - sucrose metabolic process
GO:0009753 - response to jasmonic acid stimulus
GO:0010187 - negative regulation of seed germination
GO:0042744 - hydrogen peroxide catabolic process
GO:0009409 - response to cold
GO:0046345 - abscisic acid catabolic process
GO:0009414 - response to water deprivation
GO:0009738 - abscisic acid mediated signaling
GO:0051171 - regulation of nitrogen compound metabolic process
GO:0009651 - response to salt stress
GO:0045893 - positive regulation of transcription, DNA-dependent
GO:0031667 - response to nutrient levels
GO:0010152 - pollen maturation
GO:0003700 - transcription factor activity
GO:0009845 - seed germination
GO:0042594 - response to starvation
GO:0009739 - response to gibberellin stimulus
GO:0009733 - response to auxin stimulus
GO:0005634 - nucleus
GO:0043565 - sequence-specific DNA binding
GO:0019740 - nitrogen utilization
GO:0010372 - positive regulation of gibberellin biosynthetic process
GO:0030187 - melatonin biosynthetic process
 TO:0000615 - abscisic acid sensitivity
TO:0000303 - cold tolerance
TO:0000276 - drought tolerance
TO:0000250 - vigor related trait
TO:0000401 - plant growth hormone sensitivity
TO:0000605 - hydrogen peroxide content
TO:0000430 - germination rate
TO:0000696 - starch content
TO:0000196 - amylose content
TO:0000097 - amylopectin content
TO:0000382 - 1000-seed weight
TO:0002658 - starch grain synthesis
TO:0002656 - starch grain shape
TO:0000266 - chalky endosperm
TO:0000399 - grain thickness
TO:0000590 - grain weight
TO:0000134 - alkali digestion
TO:0002667 - abscisic acid content
TO:0000011 - nitrogen sensitivity
TO:0000396 - grain yield
TO:0000172 - jasmonic acid sensitivity
TO:0000053 - pollen sterility
TO:0000253 - seed dormancy
TO:0002672 - auxin content
TO:0000604 - fat and essential oil content
TO:0002653 - endosperm storage protein content
TO:0000300 - glucose content
TO:0000455 - seed set percent
TO:0000040 - panicle length
TO:0000462 - gelatinization temperature
TO:0000211 - gel consistency
TO:0000487 - endosperm color
TO:0000162 - seed quality
TO:0000166 - gibberellic acid sensitivity
TO:0000163 - auxin sensitivity
TO:0000919 - grain weight
TO:0000397 - grain size
TO:0000483 - germinability at low temperature
TO:0000420 - fertility related trait
TO:0000429 - salt sensitivity
 PO:0009049 - inflorescence
PO:0007057 - 0 seed germination stage
PO:0020091 - obsolete microgametophyte
PO:0025500 - whole plant fruit development stage
PO:0009010 - seed
Os01g0859300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g64000.1
LOC_Os01g64000.2
LOC_Os01g64000.3
AGO18 OsAGO18
 ARGONAUTE 18 Protein argonaute 18
Argonaute18
 7 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Disease resistance
Other
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0048232 - male gamete generation
GO:0009555 - pollen development
GO:0048229 - gametophyte development
GO:0003676 - nucleic acid binding
GO:0051607 - defense response to virus
GO:0005739 - mitochondrion
GO:0031047 - gene silencing by RNA
GO:0007126 - meiosis
 TO:0000437 - male sterility
TO:0000148 - viral disease resistance
 PO:0009066 - anther
Os07g0471300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os07g28850.1
AGO1D OsAGO1d
AGO1d
 ARGONAUTE 1D Protein argonaute 1D
 6 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Tolerance and resistance - Stress tolerance
Other
 GO:0009409 - response to cold
GO:0048653 - anther development
GO:0003676 - nucleic acid binding
GO:0005739 - mitochondrion
GO:0031047 - gene silencing by RNA
GO:0003723 - RNA binding
GO:0043067 - regulation of programmed cell death
 TO:0000067 - genic male sterility-thermo sensitive
TO:0002609 - stamen length
TO:0000303 - cold tolerance
TO:0000214 - anther shape
TO:0000215 - stamen anatomy and morphology trait
TO:0002601 - stamen size
TO:0000437 - male sterility
TO:0000421 - pollen fertility
 PO:0009066 - anther
PO:0000002 - anther wall
PO:0001032 - E anther wall tapetum degeneration initiated stage
PO:0001004 - anther development stage
Os06g0729300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g51310.1
LOC_Os06g51310.2
RDR2 OsRDR2
FEM1
OsFEM1
 RNA-DEPENDENT RNA POLYMERASE 2 RNA-dependent RNA polymerase 2
Probable RNA-dependent RNA polymerase 2
Five Elements Mountain 1
 4 Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
Tolerance and resistance - Disease resistance
Reproductive organ - Pollination, fertilization, fertility - Female sterility
 GO:0003723 - RNA binding
GO:0003968 - RNA-directed RNA polymerase activity
GO:0042742 - defense response to bacterium
GO:0031047 - gene silencing by RNA
GO:0009555 - pollen development
GO:0043045 - DNA methylation during embryonic development
GO:0051445 - regulation of meiotic cell cycle
GO:0048229 - gametophyte development
GO:0009553 - embryo sac development
GO:0030422 - production of siRNA involved in RNA interference
GO:0010426 - DNA methylation on cytosine within a CHH sequence
GO:0048443 - stamen development
 TO:0000421 - pollen fertility
TO:0002676 - brassinosteroid content
TO:0002675 - gibberellic acid content
TO:0000175 - bacterial blight disease resistance
TO:0000455 - seed set percent
 Os04g0465700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os04g39160.1
GPS1 gps1
 GAMETOPHYTIC POLLEN STERILITY 1 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS10 gps10
 GAMETOPHYTIC POLLEN STERILITY 10 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS11 gps11
 GAMETOPHYTIC POLLEN STERILITY 11 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS12 gps12
 GAMETOPHYTIC POLLEN STERILITY 12 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS2 gps2
 GAMETOPHYTIC POLLEN STERILITY 2 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS3 gps3
 GAMETOPHYTIC POLLEN STERILITY 3 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS4 gps4
 GAMETOPHYTIC POLLEN STERILITY 4 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS5 gps5
 GAMETOPHYTIC POLLEN STERILITY 5 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS6 gps6
 GAMETOPHYTIC POLLEN STERILITY 6 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS7 gps7
 GAMETOPHYTIC POLLEN STERILITY 7 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS8 gps8
 GAMETOPHYTIC POLLEN STERILITY 8 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
GPS9 gps9
 GAMETOPHYTIC POLLEN STERILITY 9 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
RAG MADS3
OsMADS3
OsMADS3(t)
RMADS222
RAG1
rf3
 RICE AGAMOUS MADS box gene3
MADS-box transcription factor 3
Protein AGAMOUS-like
fertility restoration 3
 1 Other
Reproductive organ - Inflorescence
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - panicle
Reproductive organ - Spikelet, flower, glume, awn
 GO:0048653 - anther development
GO:0010229 - inflorescence development
GO:0030154 - cell differentiation
GO:0043565 - sequence-specific DNA binding
GO:0009908 - flower development
GO:0003677 - DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
 TO:0000622 - flower development trait
TO:0006009 - lodicule anatomy and morphology trait
TO:0000621 - inflorescence development trait
TO:0000215 - stamen anatomy and morphology trait
TO:0006023 - lodicule development trait
 PO:0001004 - anther development stage
PO:0001049 - lodicule development stage
PO:0009036 - lodicule
PO:0007615 - flower development stage
PO:0001083 - inflorescence development stage
PO:0009029 - stamen
Os01g0201700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g10504.3
LOC_Os01g10504.2
LOC_Os01g10504.1
SPS1 sps1
 SPOROPHYTIC POLLEN STERILITY 1 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS10 sps10
 SPOROPHYTIC POLLEN STERILITY 10 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS11 sps11
 SPOROPHYTIC POLLEN STERILITY 11 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS12 sps12
 SPOROPHYTIC POLLEN STERILITY 12 7 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS2 sps2
 SPOROPHYTIC POLLEN STERILITY 2 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS3 sps3
 SPOROPHYTIC POLLEN STERILITY 3 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS4 sps4
 SPOROPHYTIC POLLEN STERILITY 4 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS5 sps5
 SPOROPHYTIC POLLEN STERILITY 5 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS6 sps6
 SPOROPHYTIC POLLEN STERILITY 6 3 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS7 sps7
 SPOROPHYTIC POLLEN STERILITY 7 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS8 sps8
 SPOROPHYTIC POLLEN STERILITY 8 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
SPS9 sps9
 SPOROPHYTIC POLLEN STERILITY 9 9 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 -
CYP703A3 OsCYP703A3
OsCYP71AB12
CYP71AB12
 CYTOCHROME P450 HYDROXYLASE 703A3 8 Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
 GO:0005506 - iron ion binding
GO:0020037 - heme binding
GO:0048653 - anther development
GO:0016020 - membrane
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016709 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen
GO:0004497 - monooxygenase activity
GO:0010584 - pollen exine formation
GO:0010480 - microsporocyte differentiation
 TO:0000245 - pollen free
TO:0000437 - male sterility
 PO:0009066 - anther
PO:0001004 - anther development stage
PO:0001007 - pollen development stage
Os08g0131100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os08g03682.1
DMC1A OsDMC1A
OsDmc1A
Dmc1A
DMC1
OsDMC1
RiLIM15A
OsRad51
 MEIOTIC PROTEIN DMC1A MEIOTIC PROTEIN Dmc1A
DNA repair protein Rad51
 12 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0005634 - nucleus
GO:0000733 - DNA strand renaturation
GO:0005515 - protein binding
GO:0005524 - ATP binding
GO:0006281 - DNA repair
GO:0008094 - DNA-dependent ATPase activity
GO:0003677 - DNA binding
GO:0051321 - meiotic cell cycle
GO:0007129 - synapsis
GO:0003684 - damaged DNA binding
GO:0043069 - negative regulation of programmed cell death
GO:0007131 - reciprocal meiotic recombination
GO:0006310 - DNA recombination
GO:0007126 - meiosis
GO:0000712 - resolution of meiotic joint molecules as recombinants
GO:0000724 - double-strand break repair via homologous recombination
GO:0000707 - meiotic DNA recombinase assembly
GO:0051026 - chiasma formation
 TO:0000437 - male sterility
TO:0000389 - nuclear mediated male sterility
TO:0000599 - enzyme activity
 PO:0009004 - gametophyte
PO:0009049 - inflorescence
Os12g0143800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g04980.1
DMC1B OsDMC1B
OsDmc1B
Dmc1B
RiLIM15B
 MEIOTIC PROTEIN DMC1B MEIOTIC PROTEIN Dmc1B
 11 Reproductive organ - Pollination, fertilization, fertility
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0000724 - double-strand break repair via homologous recombination
GO:0000733 - DNA strand renaturation
GO:0006281 - DNA repair
GO:0007131 - reciprocal meiotic recombination
GO:0005634 - nucleus
GO:0007129 - synapsis
GO:0000712 - resolution of meiotic joint molecules as recombinants
GO:0005515 - protein binding
GO:0007126 - meiosis
GO:0005524 - ATP binding
GO:0003684 - damaged DNA binding
GO:0003677 - DNA binding
GO:0000707 - meiotic DNA recombinase assembly
GO:0051026 - chiasma formation
GO:0006310 - DNA recombination
GO:0008094 - DNA-dependent ATPase activity
 TO:0000437 - male sterility
TO:0000485 - sterility related trait
 PO:0009049 - inflorescence
Os11g0146800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g04954.1
GSL5 OsGSL5
OsSTA170
CalS5
OsCalS5
 BETA-1,3-GLUCANASE ACTIVITY 5 Oryza sativa callose synthase 5
callose synthase 5
Glucan Synthase-Like 5
 6 Tolerance and resistance - Stress tolerance
Reproductive organ - Spikelet, flower, glume, awn
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
 GO:0009555 - pollen development
GO:0005886 - plasma membrane
GO:0051445 - regulation of meiotic cell cycle
GO:0070592 - cell wall polysaccharide biosynthetic process
GO:0010383 - cell wall polysaccharide metabolic process
GO:0051446 - positive regulation of meiotic cell cycle
GO:0052543 - callose deposition in cell wall
GO:0007129 - synapsis
GO:0003843 - 1,3-beta-glucan synthase activity
GO:0006075 - 1,3-beta-glucan biosynthetic process
GO:0005911 - cell-cell junction
GO:0016021 - integral to membrane
GO:0000148 - 1,3-beta-glucan synthase complex
GO:0009409 - response to cold
GO:0009663 - plasmodesma organization
GO:0009556 - microsporogenesis
GO:0051728 - cell cycle switching, mitotic to meiotic cell cycle
GO:0007140 - male meiosis
 TO:0000729 - meiotic cell cycle trait
TO:0000639 - seed fertility
TO:0006007 - polysaccharide content
TO:0000303 - cold tolerance
TO:0000421 - pollen fertility
TO:0000455 - seed set percent
 PO:0009066 - anther
PO:0025264 - anther locule
PO:0001008 - C callose wall formation in pollen mother cells stage
PO:0001007 - pollen development stage
Os06g0182300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os06g08380.1
CSA csa
OsCSA
MYB2-5
OsMYB2-5
 CARBON STARVED ANTHER R2R3-MYB transcription factor 2-5
 1 Reproductive organ - Pollination, fertilization, fertility - Sterility
Tolerance and resistance - Stress tolerance
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0006109 - regulation of carbohydrate metabolic process
GO:0048572 - short-day photoperiodism
GO:0009555 - pollen development
GO:0009742 - brassinosteroid mediated signaling
GO:0048653 - anther development
GO:0009648 - photoperiodism
GO:0009408 - response to heat
GO:0008643 - carbohydrate transport
GO:0009651 - response to salt stress
GO:0003700 - transcription factor activity
GO:0009414 - response to water deprivation
GO:0005634 - nucleus
 TO:0006001 - salt tolerance
TO:0000696 - starch content
TO:0000421 - pollen fertility
TO:0002677 - brassinosteroid sensitivity
TO:0000229 - photoperiod sensitivity
TO:0000276 - drought tolerance
TO:0000259 - heat tolerance
TO:0000009 - genic male sterility-photoperiod sensitive
 PO:0001007 - pollen development stage
PO:0001004 - anther development stage
Os01g0274800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g16810.1
[CMS-54257] [cms-54257]*
[cms-54257]
 CYTOPLASMIC MALE STERILITY 54257 Cytoplasmic mutant induced by somaclonal variation
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
GO:0000001 - mitochondrion inheritance
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0009066 - anther
-
[CMS-AK]([CMS-JP]) [cms-ak]([cms-jp])
[cms-jp]
[cms-ak]
 CYTOPLASMIC MALE STERILITY AK Akebono' cytoplasm
'Akebono' cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
GO:0000001 - mitochondrion inheritance
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0009066 - anther
-
[CMS-ARC] [cms-ARC]*
[cms-ARC] [mt]
[cms-ARC]
 CYTOPLASMIC MALE STERILITY ARC ARC13829-16 cytoplasm
`ARC13829-26' cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0020048 - microspore
PO:0009082 - spikelet floret
-
[CMS-BO] [cms-bo]
 CYTOPLASMIC MALE STERILITY BO Chinsurah boro II' cytoplasm
`Chinsurah boro 2' cytoplasm
'Chinsurah boro II' cytoplasm
 Mt Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0005739 - mitochondrion
GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0009082 - spikelet floret
PO:0020048 - microspore
-
[CMS-CW] [cms-CW]
 CYTOPLASMIC MALE STERILITY CW Chinese wild rice cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0009082 - spikelet floret
PO:0020048 - microspore
-
[CMS-GAM] [cms-GAM]*
[cms-GAM]
 CYTOPLASMIC MALE STERILITY GAM Gambiaca cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0020048 - microspore
PO:0009082 - spikelet floret
-
[CMS-HL] [cms-HL]
 CYTOPLASMIC MALE STERILITY HL HL group cytoplasm
HL-group cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0020048 - microspore
PO:0009082 - spikelet floret
-
[CMS-IR66707A] [cms-IR66707A]*
[cms-IR66707A]
 CYTOPLASMIC MALE STERILITY IR66707A Oryza perennis Acc104823 cytoplasm
Oryza perennis Acc. 104823 cytoplasm
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
 TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0020048 - microspore
PO:0009082 - spikelet floret
-
[CMS-KALINGA-I] [cms-Kalinga-I]*
[cms-Kalinga-I]
 CYTOPLASMIC MALE STERILITY KALINGA Cytoplasmic controlled cold tolerance
 Reproductive organ - Pollination, fertilization, fertility - Male sterility
 GO:0007275 - multicellular organismal development
GO:0009409 - response to cold
 TO:0000280 - seedling vigor
TO:0000303 - cold tolerance
TO:0000232 - cytoplasmic male sterility (sensu Oryza)
 PO:0009082 - spikelet floret
PO:0020048 - microspore
PO:0009006 - shoot system
PO:0009005 - root
-
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/rice/oryzabase