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Gene Ontology Plant Ontology Trait Ontology Trait Class

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Search Condition : Filter(traitClassFacetEn:015_Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness)
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CGSNL
Gene
Symbol 		Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID MSU ID Mutant
Image
HWG2 hwg2(t)
 HYBRID WEAKNESS G2 hybrid weakness g2
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0048544 - recognition of pollen
GO:0007275 - multicellular organismal development
 -
HWH1 hwh1
 HYBRID WEAKNESS H1 hybrid weakness h1
 2 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0048544 - recognition of pollen
GO:0007275 - multicellular organismal development
 Os02g0621800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g40840.1
HWH2 OsHWH2
AZT5
OsAZT5
OsTMT5
TMT5
 HYBRID WEAKNESS H2 hybrid weakness h2
PUTATIVE HEXOSE TRANSPORTER PROTEIN
AZT protein 5
AZT-type monosaccharide transporter 5
monosaccharide transporter AZT5
tonoplast monosaccharide transporter 5
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Biochemical character
Tolerance and resistance - Stress tolerance
 GO:0009651 - response to salt stress
GO:0007275 - multicellular organismal development
GO:0015293 - symporter activity
GO:0048544 - recognition of pollen
GO:0016020 - membrane
 TO:0006001 - salt tolerance
 PO:0025281 - pollen
PO:0009049 - inflorescence
Os11g0475600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g28610.1
CIF2 CROSS-INCOMPATIBILITY IN THE FEMALE REACTION 2 6 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0009856 - pollination
GO:0009566 - fertilization
 -
CIM cinm*
CINM
cim
cinm
 CROSS-INCOMPATIBILITY REACTIONS IN THE MALE cross-incompatibility carried by T65wx
 6 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0009856 - pollination
GO:0009566 - fertilization
 TO:0000035 - incompatibility trait
 PO:0009082 - spikelet floret
-
FES1 fes1
 FEMALE STERILE 1 female sterile1
female sterile 1
female sterile-1
 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 TO:0000358 - female sterility
 PO:0009062 - gynoecium
-
FES2 fes2
 FEMALE STERILE 2 female sterile2
female sterile 2
female sterile-2
 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 TO:0000358 - female sterility
 PO:0009062 - gynoecium
-
FES3 Fes3(Fes2)
Fs
Fes3
 FEMALE STERILE 3 Female sterile3
Female sterile 3
Female sterile-3
 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 TO:0000358 - female sterility
 PO:0009062 - gynoecium
-
HCA1 hca1
 HYBRID CHLOROSIS-A hybrid chlorosis-a
 12 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0015995 - chlorophyll biosynthetic process
GO:0048544 - recognition of pollen
 TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
-
HCA2 hca2
 HYBRID CHLOROSIS-A hybrid chlorosis-a
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0015995 - chlorophyll biosynthetic process
GO:0009873 - ethylene mediated signaling pathway
 TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
-
HWA1 Hwa1(L1a)
L-1-a(La)
L1a
Hwa1
 HYBRID WEAKNESS A1 Hybrid weakness a1
Hybrid weakness (lethal)-a1
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000042 - f1-hybrid incompatibility
TO:0000355 - heterosis
 PO:0009046 - flower
-
HWA2 Hwa2(L1b)
L-1-b(Lb)
L1b
Hwa2
 HYBRID WEAKNESS A2 Hybrid weakness a2
Hybrid weakness (lethal)-a2
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000355 - heterosis
TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
-
HWB1 hwb1(w'a)
w'a
hwb1
 HYBRID WEAKNESS B1 hybrid weakness b1
f2 weakness-b1
 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000355 - heterosis
TO:0000046 - f2-generation sterility
 PO:0009046 - flower
-
HWB2 hwb2(w'b)
w'b
hwb2
 HYBRID WEAKNESS B2 hybrid weakness b2
f2 weakness-b2
 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000046 - f2-generation sterility
TO:0000355 - heterosis
 PO:0009046 - flower
-
HWC1 Hwc1(L2a)
L-2-a
Lr1
Hwc-1
L2a
 HYBRID WEAKNESS C1 Hybrid weakness c1
Hybrid weakness (lethal)-c1
 1 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000042 - f1-hybrid incompatibility
TO:0000355 - heterosis
 PO:0009046 - flower
-
HWC2 Hwc2(L2b)
L-2-b
Lr2
Hwc-2
L2b
Hwc2
 HYBRID WEAKNESS C2 Hybrid weakness c2
Hybrid weakness (lethal)-c2
 4 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000355 - heterosis
TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
-
L L*
 LETHAL FACTOR Lethal factor
 3 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0009566 - fertilization
 -
CIF1 Cinf(t)*(Lcr)
cinf(t)
Cif
Lcr
Cinf
 CROSS-INCOMPATIBILITY IN THE FEMALE REACTION 1 Cross-incompatibility in the female reaction
 6 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0009856 - pollination
GO:0009566 - fertilization
 TO:0000035 - incompatibility trait
 PO:0009082 - spikelet floret
-
HWD2 hwd2
 HYBRID WEAKNESS D2 hybrid weakness d2
hybrid weakness-d2
 7 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000355 - heterosis
TO:0000046 - f2-generation sterility
 PO:0009046 - flower
-
HWD1 hwd1
 HYBRID WEAKNESS D1 hybrid weakness d1
hybrid weakness-d1
 10 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000046 - f2-generation sterility
TO:0000355 - heterosis
 PO:0009046 - flower
-
GAL gal(lt)
It-m
lt
gal
 GAMETIC LETHAL gametic lethal
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 -
HSA2 hsa2(t)*
hsa2(t)
hst50
 F2 STERILITY-2(T) F2 sterility-2(t)
hybrid sterility-50
 8 Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 TO:0000046 - f2-generation sterility
TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
-
HWE1 hwe1(t)*
hwe1
OsHWE1
OsEAF6/HWE1
OsEAF6
EAF6
HWS2
OsHWS2
MSHB12
OsMSHB12
 HYBRID WEAKNESS E1 hybrid weakness e1
hybrid weakness-e1
Esa1-associated factor 6
Hybrid Weakness and Sterility 2
Male Sterility-Related Hybrid Breakdown Locus on Chromosome 12
 12 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility, hybrid weakness
 GO:0048232 - male gamete generation
GO:0016573 - histone acetylation
GO:0051321 - meiotic cell cycle
GO:0007276 - gamete generation
GO:0000123 - histone acetyltransferase complex
GO:0051301 - cell division
GO:0005634 - nucleus
GO:0010584 - pollen exine formation
GO:0009791 - post-embryonic development
GO:0009553 - embryo sac development
GO:0009558 - cellularization of the embryo sac
GO:0007292 - female gamete generation
GO:0001709 - cell fate determination
GO:0040029 - regulation of gene expression, epigenetic
GO:0006355 - regulation of transcription, DNA-dependent
GO:0006768 - biotin metabolic process
GO:0046890 - regulation of lipid biosynthetic process
GO:0032368 - regulation of lipid transport
GO:0006772 - thiamin metabolic process
GO:0048658 - tapetal layer development
GO:0006325 - chromatin organization
GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000214 - anther shape
TO:0000358 - female sterility
TO:0000455 - seed set percent
TO:0000576 - stem length
TO:0000209 - palea number
TO:0000456 - spikelet number
TO:0006032 - panicle size
TO:0000019 - seedling height
TO:0000053 - pollen sterility
TO:0000437 - male sterility
TO:0000046 - f2-generation sterility
TO:0000355 - heterosis
TO:0000357 - growth and development trait
TO:0000499 - flower anatomy and morphology trait
TO:0000223 - pistil anatomy and morphology trait
TO:0000495 - chlorophyll content
TO:0000036 - hybrid incompatibility
TO:0000416 - embryosac abortion
 PO:0009051 - spikelet
PO:0009049 - inflorescence
PO:0009046 - flower
PO:0009047 - stem
PO:0025034 - leaf
Os12g0298600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g20310.1
LOC_Os12g20310.2
HWG1 hwg1(t)
 HYBRID WEAKNESS G1 hybrid weakness g1
 6 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 -
HBD3 hbd3
 HYBRID BREAKDOWN 3 hybrid breakdown 3
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 -
HWF1 hwf1(t)
hwf1(t)*
hwf1
 HYBRID WEAKNESS F1 hybrid weakness f1
hybrid weakness-f1
 4 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
GO:0048544 - recognition of pollen
 TO:0000046 - f2-generation sterility
 PO:0009046 - flower
-
HSA1A hsa1(t)
s(t)
hst49
 F2 STERILITY-1 F2 sterility-1(t)
 12 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility
 GO:0007275 - multicellular organismal development
 TO:0000046 - f2-generation sterility
TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
Os12g0589400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g39880.1
HWE2 OsHWE2
OsEAF6/HWE2
OsEAF6
EAF6
HWS1
OsHWS1
MSHB1
OsMSHB1
 HYBRID WEAKNESS E2 hybrid weakness e2
hybrid weakness-e2
Esa1-associated factor 6
Hybrid Weakness and Sterility 1
Male Sterility-Related Hybrid Breakdown Locus on Chromosome 1
 1 Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility, hybrid weakness
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0006772 - thiamin metabolic process
GO:0007276 - gamete generation
GO:0006768 - biotin metabolic process
GO:0051321 - meiotic cell cycle
GO:0032368 - regulation of lipid transport
GO:0001709 - cell fate determination
GO:0048232 - male gamete generation
GO:0007275 - multicellular organismal development
GO:0016573 - histone acetylation
GO:0048658 - tapetal layer development
GO:0051301 - cell division
GO:0040029 - regulation of gene expression, epigenetic
GO:0007292 - female gamete generation
GO:0048544 - recognition of pollen
GO:0046890 - regulation of lipid biosynthetic process
GO:0009558 - cellularization of the embryo sac
GO:0006325 - chromatin organization
GO:0005634 - nucleus
GO:0010584 - pollen exine formation
GO:0009791 - post-embryonic development
GO:0009553 - embryo sac development
GO:0006355 - regulation of transcription, DNA-dependent
GO:0000123 - histone acetyltransferase complex
 TO:0000209 - palea number
TO:0000357 - growth and development trait
TO:0000576 - stem length
TO:0000437 - male sterility
TO:0000358 - female sterility
TO:0006032 - panicle size
TO:0000456 - spikelet number
TO:0000499 - flower anatomy and morphology trait
TO:0000455 - seed set percent
TO:0000416 - embryosac abortion
TO:0000355 - heterosis
TO:0000421 - pollen fertility
TO:0000639 - seed fertility
TO:0000207 - plant height
TO:0000152 - panicle number
TO:0000040 - panicle length
TO:0000053 - pollen sterility
TO:0000214 - anther shape
TO:0000036 - hybrid incompatibility
TO:0000495 - chlorophyll content
TO:0000223 - pistil anatomy and morphology trait
 PO:0009049 - inflorescence
PO:0009051 - spikelet
PO:0009047 - stem
PO:0025034 - leaf
PO:0009046 - flower
Os01g0233400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g13250.1
HBD2 OsCKI1
CKI
hbd2
CKI1
LTG1
OsLTG1
OsCKI1/LTRPK1
LTRPK1
OsLTRPK1
LSES1
OsLSES1
 HYBRID BREAKDOWN 2 hybrid breakdown 2
rice casein Kinase I
casein kinase I
casein kinase I1
Low Temperature Growth 1
low-temperature response protein kinase 1
leaf starch excess and senescence 1
 2 Vegetative organ - Root
Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Tolerance and resistance - Stress tolerance
Vegetative organ - Leaf
 GO:0042981 - regulation of apoptosis
GO:0005982 - starch metabolic process
GO:0005975 - carbohydrate metabolic process
GO:0009738 - abscisic acid mediated signaling
GO:0005983 - starch catabolic process
GO:0010150 - leaf senescence
GO:0005524 - ATP binding
GO:0007275 - multicellular organismal development
GO:0009826 - unidimensional cell growth
GO:0009850 - auxin metabolic process
GO:0009409 - response to cold
GO:0009851 - auxin biosynthetic process
GO:0000226 - microtubule cytoskeleton organization
GO:0009631 - cold acclimation
GO:0005634 - nucleus
GO:0006468 - protein amino acid phosphorylation
GO:0009741 - response to brassinosteroid stimulus
GO:0048364 - root development
GO:0004672 - protein kinase activity
GO:0004674 - protein serine/threonine kinase activity
GO:0004713 - protein tyrosine kinase activity
 TO:0000206 - leaf angle
TO:0000303 - cold tolerance
TO:0000163 - auxin sensitivity
TO:0000495 - chlorophyll content
TO:0000084 - root number
TO:0000257 - root branching
TO:0000326 - leaf color
TO:0000615 - abscisic acid sensitivity
TO:0002672 - auxin content
TO:0000227 - root length
TO:0000401 - plant growth hormone sensitivity
TO:0000293 - chlorophyll-a content
TO:0000605 - hydrogen peroxide content
TO:0000249 - leaf senescence
TO:0000696 - starch content
TO:0000656 - root development trait
TO:0000295 - chlorophyll-b content
 PO:0020125 - elongation zone
PO:0001054 - 4 leaf senescence stage
PO:0009005 - root
Os02g0622100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os02g40860.1
HSA1B hsa1(t)
s(t)
hst49
OsHSA1B
 F2 STERILITY-1 F2 sterility-1(t)
 12 Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility
Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
 GO:0007275 - multicellular organismal development
 TO:0000046 - f2-generation sterility
TO:0000042 - f1-hybrid incompatibility
 PO:0009046 - flower
Os12g0589700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os12g39920
RLCK314 OsRLCK314
25L2
 RECEPTOR-LIKE CYTOPLASMIC KINASE 314 Receptor-like Cytoplasmic Kinase 314
LOC_Os11g07225-like 2
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Vegetative organ - Root
 GO:0048364 - root development
GO:0009408 - response to heat
 TO:0000207 - plant height
TO:0000432 - temperature response trait
TO:0000392 - sterility or fertility trait
TO:0000084 - root number
TO:0000654 - shoot development trait
 PO:0007520 - root development stage
Os11g0173550 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g07240.1
HWI1 25L1
 HYBRID WEAKNESS I 1 LOC_Os11g07225-like 1
Hybrid weakness i1
 11 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Vegetative organ - Root
 GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0009408 - response to heat
GO:0009506 - plasmodesma
GO:0009755 - hormone-mediated signaling
GO:0005886 - plasma membrane
GO:0048364 - root development
GO:0046777 - protein amino acid autophosphorylation
GO:0031625 - ubiquitin protein ligase binding
GO:0016021 - integral to membrane
GO:0001653 - peptide receptor activity
GO:0004675 - transmembrane receptor protein serine/threonine kinase activity
GO:0005524 - ATP binding
 TO:0000654 - shoot development trait
TO:0000432 - temperature response trait
TO:0000207 - plant height
TO:0000036 - hybrid incompatibility
TO:0000084 - root number
TO:0000392 - sterility or fertility trait
 PO:0007520 - root development stage
Os11g0173500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os11g07230.1
LOC_Os11g07230.2
LOC_Os11g07230.3
HWI2 Hwi2
OsHWI2
OsSub9
SUB9
 HYBRID WEAKNESS I 2 Subtilisin 9
Hybrid weakness i2
 1 Reproductive organ - Pollination, fertilization, fertility - Hybrid weakness
Vegetative organ - Root
Tolerance and resistance - Stress tolerance
Biochemical character
 GO:0010042 - response to manganese ion
GO:0048364 - root development
GO:0005618 - cell wall
GO:0009408 - response to heat
GO:0004252 - serine-type endopeptidase activity
 TO:0000207 - plant height
TO:0000432 - temperature response trait
TO:0000073 - manganese sensitivity
TO:0000392 - sterility or fertility trait
TO:0000654 - shoot development trait
TO:0000036 - hybrid incompatibility
TO:0000084 - root number
 PO:0007520 - root development stage
PO:0009006 - shoot system
Os01g0795400 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 ) 		LOC_Os01g58290.4
LOC_Os01g58290.3
LOC_Os01g58290.2
LOC_Os01g58290.1
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