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CGSNL Gene Symbol |
Gene symbol synonym(s) | CGSNL Gene Name | Gene name synonym(s) | Chr. No. | Trait Class | Gene Ontology | Trait Ontology | Plant Ontology | RAP ID | MSU ID |
Mutant Image |
|---|---|---|---|---|---|---|---|---|---|---|---|
| RF1B |
RF1b Rf-1B PPR7 |
RESTORATION OF FERTILITY 1B |
pentatricopeptide repeat motif containing gene 7 PPR motif-containing gene 7 |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion GO:0007275 - multicellular organismal development |
TO:0000497 - fertility restoration trait |
Os10g0499500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os10g35640.1
|
||
| RF7 |
RF7 |
RESTORATION OF FERTILITY 7 | 12 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
- | |||||
| RF1C |
Rf-1C |
RESTORATION OF FERTILITY 1C | 10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
- | |||||
| RF1D |
Rf-1D |
RESTORATION OF FERTILITY 1D | 10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
- | |||||
| RF1E |
Rf-1E |
RESTORATION OF FERTILITY 1E | 10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
- | |||||
| RF1F |
Rf-1F |
RESTORATION OF FERTILITY 1F | 10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
- | |||||
| IFR |
Ifr Rf16 Ifr1 |
INDUCTION OF FERTILITY |
Induction of fertility restoration Pollen fertility restore-16 instability of fertility restoration 1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000498 - female fertility restoration trait TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | |||
| R1* |
R1* |
FERTILITY RESTORATION1 |
Fertility restoration1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0009566 - fertilization |
TO:0000498 - female fertility restoration trait TO:0000308 - male fertility restoration trait |
- | ||||
| R2* |
R2* |
FERTILITY RESTORATION2 |
Fertility restoration1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0009566 - fertilization |
TO:0000498 - female fertility restoration trait TO:0000308 - male fertility restoration trait |
- | ||||
| RF AK(RFJ) |
Rf ak(Rfj) Rf7 Rfak Rfj |
POLLEN FERTILITY RESTORATION-AK |
Pollen fertility restoration-ak Pollen fertility restoration-7 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | |||
| RF3 |
Rf3* (R2, Rf2) Rf2 R2 Rf3 Rf-3 |
RESTORATION OF FERTILITY 3 |
Pollen fertility restoration-3 |
1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | ||
| RF2 |
Rf2 (Rfx) Rfx Rf2 |
RESTORATION OF FERTILITY 2 |
Pollen fertility restoration2 Pollen fertility restoration 2 Pollen fertility restoration-2 |
2 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
Os02g0274000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os02g17380.1
|
|
| RF4 |
Rf4* (R1, Rf1) R1 Rf1 RfWA1 Rf4 |
RESTORATION OF FERTILITY 4 |
Pollen fertility restoration1 Pollen fertility restoration 1 Fertility restoration1 for 'WA' cytoplasm Pollen fertility restoration-4 |
7 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | ||
| RF1 |
Rf1 (Rf-1) rf-1 PPR791 PPR8-1 Rf-1 Rf1 Rf-1A Rf5 Rf1a RF5 Rf5(t)*(Rf(t)*) RF1A PPR6 PLS31 OsPLS31 |
RESTORATION OF FERTILITY 1 |
Pollen fertility restoration1 Pollen fertility restoration-1 "Rf1 protein mitochondrial precursor" "Rf1 protein mitochondrial" "Protein Rf1 mitochondrial" fertility restorer 5 Pentatricopeptide Repeat Protein RF5 pentatricopeptide repeat protein 791 Fertile revertant from II-32A Pollen fertility restoration-5 RESTORATION OF FERTILITY 5 RESTORATION OF FERTILITY 1A pentatricopeptide repeat motif containing gene 6 PPR motif-containing gene 6 PLS-class Pentatricopeptide Repeat Protein 31 PLS-type PPR protein 31 |
10 |
Tolerance and resistance - Stress tolerance Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion GO:0007275 - multicellular organismal development GO:0046688 - response to copper ion |
TO:0000308 - male fertility restoration trait TO:0000498 - female fertility restoration trait TO:0000021 - copper sensitivity |
PO:0009066 - anther |
Os10g0497432
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os10g35440.1
|
|
| RF6 |
Rf6(t) Rf6(t)* Rf5 Rf6 |
RESTORATION OF FERTILITY 6 |
Pollen fertility restoration-6 |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | ||
| RFWA2 |
RfWA2(Rf(u)) RfWA2* Rf(u) Rf8 |
SMALL GTP-BINDING PROTEIN 1 |
Pollen fertility restoration-8 |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0007275 - multicellular organismal development |
TO:0000308 - male fertility restoration trait |
PO:0009066 - anther |
- | ||
| HXK6 |
OsHXK6 |
HEXOKINASE-6 |
Hexokinase 6 |
1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration Biochemical character |
GO:0016021 - integral to membrane GO:0045449 - regulation of transcription GO:0045014 - negative regulation of transcription by glucose GO:0030528 - transcription regulator activity GO:0051594 - detection of glucose GO:0005739 - mitochondrion GO:0006397 - mRNA processing GO:0009555 - pollen development GO:0006096 - glycolysis GO:0010182 - sugar mediated signaling GO:0004396 - hexokinase activity GO:0005524 - ATP binding GO:0009507 - chloroplast GO:0009527 - plastid outer membrane |
TO:0000308 - male fertility restoration trait |
Os01g0742500
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os01g53930.2
LOC_Os01g53930.1 |
||
| GRP162 |
OsGRP162 RRM1-212 OsRRM1-212 |
GLYCINE-RICH RNA-BINDING PROTEIN 162 |
Glycine-Rich Protein GRP162 a Gly-rich protein encoding 162 amino acids glycine-rich protein 162 RNA recognition motif domain protein 1-212 |
12 |
Tolerance and resistance - Stress tolerance Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0009408 - response to heat GO:0010228 - vegetative to reproductive phase transition GO:0010043 - response to zinc ion GO:0009651 - response to salt stress GO:0009409 - response to cold GO:0046686 - response to cadmium ion GO:0032508 - DNA duplex unwinding GO:0010501 - RNA secondary structure unwinding GO:0007623 - circadian rhythm GO:0045087 - innate immune response GO:0000166 - nucleotide binding GO:0006406 - mRNA export from nucleus GO:0003697 - single-stranded DNA binding GO:0010119 - regulation of stomatal movement GO:0009737 - response to abscisic acid stimulus GO:0005634 - nucleus GO:0005618 - cell wall GO:0009507 - chloroplast GO:0005730 - nucleolus GO:0005777 - peroxisome GO:0005886 - plasma membrane GO:0003690 - double-stranded DNA binding |
TO:0000516 - relative root length TO:0000497 - fertility restoration trait TO:0001034 - relative plant height TO:0000259 - heat tolerance TO:0000633 - relative total dry weight |
Os12g0632000
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os12g43600.1
|
||
| qRF-1(t) |
qRf-1(t) |
Fertility restoration (QTL)-1(t) |
Fertility restoration (QTL)-1(t) |
1 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
- | |||||
| qRF-7(t) |
qRf-7(t) |
Fertility restoration (QTL)-7(t) |
Fertility restoration (QTL)-7(t) |
7 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
- | |||||
| qRF-10(t) |
qRf-10(t) |
Fertility restoration (QTL)-10(t) |
Fertility restoration (QTL)-10(t) |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
- | |||||
| qRF-11(t) |
qRf-11(t) |
Fertility restoration (QTL)-11(t) |
Fertility restoration (QTL)-11(t) |
11 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
- | |||||
| RAFTIN1 |
OsRAFTIN1 BURP13 OsBURP13 Os RAFTIN1 |
RAFTIN1 |
rice raftin1 raftin1 BURP domain-containing protein 13 Protein RAFTIN 1 RAFTIN1protein |
8 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0009555 - pollen development GO:0016023 - cytoplasmic membrane-bounded vesicle GO:0043668 - exine |
Os08g0496800
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os08g38810.1
LOC_Os08g38810.2 |
|||
| COX11 |
OsCOX11 |
CYTOCHROME OXIDASE 11 |
cytochrome oxidase 11 |
3 |
Biochemical character Tolerance and resistance - Disease resistance Reproductive organ - Pollination, fertilization, fertility - Male sterility Reproductive organ - Pollination, fertilization, fertility - Fertility restoration Reproductive organ - Pollination, fertilization, fertility - Hybrid sterility, hybrid weakness |
GO:0009846 - pollen germination GO:0010101 - post-embryonic root morphogenesis GO:0032592 - integral to mitochondrial membrane GO:0005507 - copper ion binding GO:0050832 - defense response to fungus GO:0043621 - protein self-association GO:0005739 - mitochondrion |
TO:0000357 - growth and development trait TO:0000605 - hydrogen peroxide content TO:0000308 - male fertility restoration trait TO:0000053 - pollen sterility TO:0000074 - blast disease |
Os03g0718600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os03g50940.2
LOC_Os03g50940.1 |
||
| _ |
Rf4 Rf-4 PPR782a PPR9 PPR3 |
_ |
restorer-of-fertility 4 fertility restorer 4 pentatricopeptide repeat (PPR)-encoding gene 782a pentatricopeptide repeat-containing protein 782a pentatricopeptide repeat protein 9 pentatricopeptide repeat motif containing gene 3 PPR motif-containing gene 3 |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion |
TO:0000308 - male fertility restoration trait TO:0000421 - pollen fertility |
Os10g0495200
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os10g35240.1
LOC_Os10g35240.2 |
||
| _ |
Rf |
_ |
restorer-of-fertility fertility restorer |
10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
- | |||||
| _ |
RFC3 |
_ |
RFC subunit 3 restoration of fertility complex subunit 3 |
5 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion GO:0034975 - protein folding in endoplasmic reticulum GO:0016020 - membrane |
TO:0000308 - male fertility restoration trait |
Os05g0230600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os05g14170.1
|
||
| _ |
Rf6 |
_ |
fertility restoration-6 RESTORATION OF FERTILITY 6 |
8 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion GO:0006397 - mRNA processing GO:0009555 - pollen development |
TO:0000308 - male fertility restoration trait |
Os08g0110200
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os08g01870.1
|
||
| RF20 |
OsPLS9 PLS9 Rf20 OsRf20 |
RESTORATION OF FERTILITY 20 |
PLS-class Pentatricopeptide Repeat Protein 9 PLS-class PPR protein 9 Pollen fertility restoration-20 |
1 |
Reproductive organ - Pollination, fertilization, fertility - Male sterility Tolerance and resistance - Stress tolerance Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0009408 - response to heat GO:0003723 - RNA binding GO:0009451 - RNA modification |
TO:0000308 - male fertility restoration trait TO:0000421 - pollen fertility TO:0000605 - hydrogen peroxide content TO:0000432 - temperature response trait |
Os01g0800400
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os01g58630.1
|
||
| RF19 |
OsRf19 Rf19 |
RESTORATION OF FERTILITY 19 | 10 |
Reproductive organ - Pollination, fertilization, fertility - Fertility restoration |
GO:0005739 - mitochondrion |
TO:0000308 - male fertility restoration trait |
- | ||||
| CSIT1 |
OsRING184 RING184 OsCSIT1 OsLtn1 Ltn1 |
CRITICAL STERILITY-INDUCING TEMPERATURE 1 |
RING-type E3 ubiquitin ligase 184 OsListerin Listerin |
1 |
Tolerance and resistance - Stress tolerance Reproductive organ - Pollination, fertilization, fertility - Fertility restoration Reproductive organ - Pollination, fertilization, fertility - Male sterility |
GO:0016567 - protein ubiquitination GO:0009408 - response to heat GO:0008270 - zinc ion binding GO:0005737 - cytoplasm GO:0006515 - misfolded or incompletely synthesized protein catabolic process GO:0043067 - regulation of programmed cell death GO:0043024 - ribosomal small subunit binding GO:0043023 - ribosomal large subunit binding GO:0005829 - cytosol GO:0048653 - anther development GO:0009555 - pollen development |
TO:0000421 - pollen fertility TO:0000067 - genic male sterility-thermo sensitive TO:0000308 - male fertility restoration trait TO:0000259 - heat tolerance |
PO:0001004 - anther development stage PO:0001007 - pollen development stage PO:0020048 - microspore PO:0004700 - anther wall middle layer PO:0009066 - anther PO:0009071 - anther wall tapetum |
Os01g0977600
Oryzabase
(
IRGSP 1.0
/
Build5
)
Rap ( IRGSP 1.0 / Build5 ) |
LOC_Os01g74610.1
|
31 Hit
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