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Gene Ontology Plant Ontology Trait Ontology Trait Class

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Search Condition : Filter(traitClassFacetEn:050_Reproductive organ - Pollination, fertilization, fertility - Sterility)
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CGSNL
Gene
Symbol
Gene symbol synonym(s) CGSNL Gene Name Gene name synonym(s) Chr. No. Trait Class Gene Ontology Trait Ontology Plant Ontology RAP ID Mutant
Image
MLS1 mls1
MALFORMED LEMMA 1 malformed lemma1
malformed lemma 1
malformed lemma-1
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0007275 - multicellular organismal development
TO:0000053 - pollen sterility
TO:0000079 - lemma and palea anatomy and morphology trait
TO:0000436 - spikelet sterility
PO:0009037 - lemma
PO:0009038 - palea
PO:0009051 - spikelet
PO:0020091 - obsolete microgametophyte
-
MLS2 mls2
MALFORMED LEMMA 2 malformed lemma2
malformed lemma 2
malformed lemma-2
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0007275 - multicellular organismal development
TO:0000436 - spikelet sterility
TO:0000053 - pollen sterility
TO:0000079 - lemma and palea anatomy and morphology trait
PO:0009037 - lemma
PO:0009038 - palea
PO:0009051 - spikelet
PO:0020091 - obsolete microgametophyte
-
SUG1 Su g1
SUPPRESSOR FOR LONG STERILE LEMMAS G 1 Suppressor for long sterile lemmas (g1)
SUPPRESSOR FOR LONG STERILE LEMMAS G1
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0007275 - multicellular organismal development
TO:0000240 - sterile lemma length
PO:0009037 - lemma
-
MLS3 mls3
MALFORMED LEMMA 3 malformed spikelet3 (lemma3 ?)
malformed spikelet 3
malformed spikelet-3
4 Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0007275 - multicellular organismal development
TO:0000436 - spikelet sterility
TO:0000079 - lemma and palea anatomy and morphology trait
TO:0000432 - temperature response trait
PO:0000003 - whole plant
PO:0009037 - lemma
PO:0009038 - palea
PO:0009051 - spikelet
-
_ OsGME2
GME2
_ GDP-D-mannose epimerase 2
11 Biochemical character
Character as QTL - Yield and productivity
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0019853 - L-ascorbic acid biosynthetic process
GO:0051287 - NAD or NADH binding
GO:0047918 - GDP-mannose 3,5-epimerase activity
GO:0005829 - cytosol
TO:0000448 - filled grain percentage
TO:0000436 - spikelet sterility
TO:0000382 - 1000-seed weight
TO:0000371 - yield trait
Os11g0591100 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
_ OsGME1
GME1
_ GDP-D-mannose-3'
5'-epimerase 1
GDP-D-mannose epimerase 1
10 Biochemical character
Tolerance and resistance - Disease resistance
Tolerance and resistance - Stress tolerance
Character as QTL - Yield and productivity
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0050662 - coenzyme binding
GO:0010043 - response to zinc ion
GO:0019853 - L-ascorbic acid biosynthetic process
GO:0050832 - defense response to fungus
GO:0047918 - GDP-mannose 3,5-epimerase activity
TO:0000448 - filled grain percentage
TO:0000382 - 1000-seed weight
TO:0000351 - zinc sensitivity
TO:0000436 - spikelet sterility
TO:0000074 - blast disease
TO:0000371 - yield trait
Os10g0417600 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
MEICA1 MEIOTIC CHROMOSOME ASSOCIATION 1 Meiotic Chromosome Association 1
3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0000710 - meiotic mismatch repair
GO:0010520 - regulation of reciprocal meiotic recombination
GO:0045132 - meiotic chromosome segregation
TO:0000485 - sterility related trait
TO:0000180 - spikelet fertility
TO:0000421 - pollen fertility
Os03g0144000 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
HAP3D OsHAP3D
OsEnS-83
OsNF-YB9
NF-YB9
NFYB9
HAP3D SUBUNIT OF CCAAT-BOX BINDING COMPLEX HAP3 subunit D
LEC1-type 3 subunit protein-D
endosperm-specific gene 83
NUCLEAR FACTOR-Y subunit B9
NUCLEAR FACTOR-Y subunit NF-YB9
HAP3 SUBUNIT D
NF-YB subunit 9
NF-YB family 9
6 Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Sterility
Other
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
GO:0009790 - embryonic development
GO:0009845 - seed germination
GO:0043565 - sequence-specific DNA binding
GO:0048579 - negative regulation of long-day photoperiodism, flowering
TO:0000276 - drought tolerance
TO:0000064 - embryo related trait
TO:0000137 - days to heading
TO:0000485 - sterility related trait
PO:0000003 - whole plant
PO:0009009 - plant embryo
Os06g0285200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
HAP3E OsHAP3E
OsLEC1/OsHAP3E
OsLEC1
OsNF-YB7
NF-YB7
NFYB7
L1L
HAP3E SUBUNIT OF CCAAT-BOX BINDING COMPLEX HAP3 subunit E
LEC1-type 3 subunit protein-E
leafy cotyledon 1
NUCLEAR FACTOR-Y subunit B7
NUCLEAR FACTOR-Y subunit NF-YB7
LEC1-LIKE
LEAFY COTYLEDON1-LIKE
HAP3 SUBUNIT E
NF-YB subunit 7
NF-YB family 7
2 Reproductive organ - Heading date
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Sterility
Other
GO:0005634 - nucleus
GO:0006350 - transcription
GO:0006355 - regulation of transcription, DNA-dependent
GO:0043565 - sequence-specific DNA binding
GO:0048579 - negative regulation of long-day photoperiodism, flowering
TO:0000064 - embryo related trait
TO:0000276 - drought tolerance
TO:0000137 - days to heading
TO:0000485 - sterility related trait
Os02g0725700 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
CSA csa
CARBON STARVED ANTHER 1 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Male sterility
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0003700 - transcription factor activity
GO:0008643 - carbohydrate transport
Os01g0274800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
AID1 aid1
OsAID1
ANTHER INDEHISCENCE 1 anther indehiscence-1
Anther Indehiscence1
6 Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0043067 - regulation of programmed cell death
GO:0045449 - regulation of transcription
GO:0003677 - DNA binding
GO:0003700 - transcription factor activity
GO:0005634 - nucleus
GO:0009901 - anther dehiscence
GO:0010152 - pollen maturation
TO:0000137 - days to heading
TO:0000436 - spikelet sterility
TO:0000346 - tiller number
TO:0000437 - male sterility
TO:0000053 - pollen sterility
TO:0000245 - pollen free
PO:0000030 - septum
PO:0009025 - vascular leaf
PO:0020002 - anther wall endothecium
PO:0020101 - stomium
Os06g0181300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
S33 S33(t)
GAMETE ELIMINATOR33(T) gamete eliminator33(t)
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0007275 - multicellular organismal development
-
SNB AP2/EREBP#073
AP2/EREBP73
AP2-3
SUPERNUMERARY BRACT GENE Supernumerary Bract gene
Supernumerary Bract
SUPERNUMERARY BRACT
supernumerary bract
transcription factor; SNB
APETALA2/ethylene-responsive element binding protein 73
APETALA2-3
7 Reproductive organ - panicle
Seed - Morphological traits
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0045449 - regulation of transcription
GO:0003700 - transcription factor activity
GO:0009908 - flower development
GO:0010092 - specification of organ identity
GO:0010077 - maintenance of inflorescence meristem identity
GO:0005634 - nucleus
GO:0048506 - regulation of timing of meristematic phase transition
GO:0010022 - meristem determinacy
TO:0000436 - spikelet sterility
TO:0000671 - pre-flowering flower abortion
TO:0000209 - palea number
TO:0000622 - flower development trait
TO:0000208 - lemma number
TO:0000650 - lemma length
TO:0006030 - spikelet meristem identity
TO:0000397 - grain size
TO:0000382 - 1000-seed weight
TO:0006032 - panicle size
TO:0000225 - stamen number
PO:0006327 - spikelet meristem
PO:0007615 - flower development stage
PO:0009029 - stamen
PO:0009030 - carpel
PO:0009034 - flower bract
PO:0009036 - lodicule
PO:0009039 - glume
Os07g0235800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
PAIR1 Pair1
HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1 HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS1
Homologous pairing aberration in rice meiosis 1
Protein PAIR1
Protein HOMOLOGOUS PAIRING ABERRATION IN RICE MEIOSIS 1
3 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0007134 - meiotic telophase I
GO:0005634 - nucleus
GO:0007128 - meiotic prophase I
GO:0007133 - meiotic anaphase I
GO:0009556 - microsporogenesis
GO:0009554 - megasporogenesis
TO:0000358 - female sterility
TO:0000729 - meiotic cell cycle trait
TO:0000437 - male sterility
PO:0000431 - megasporocyte
PO:0020047 - microsporocyte
Os03g0106300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
_ OsKu70
Ku70
_ rice homolog of Ku70
Ku70 homolog
7 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0006310 - DNA recombination
GO:0043564 - Ku70:Ku80 complex
GO:0000723 - telomere maintenance
GO:0003684 - damaged DNA binding
GO:0003690 - double-stranded DNA binding
GO:0004003 - ATP-dependent DNA helicase activity
GO:0005524 - ATP binding
GO:0006281 - DNA repair
GO:0006303 - double-strand break repair via nonhomologous end joining
GO:0009408 - response to heat
GO:0042162 - telomeric DNA binding
GO:0032502 - developmental process
TO:0000168 - abiotic stress trait
TO:0000357 - growth and development trait
TO:0000485 - sterility related trait
Os07g0184900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
RAD51D OsRAD51D
OsRad51D
OsRAD51D.1
OsRAD51D.2
OsRAD51D.3
DNA REPAIR PROTEIN RAD51D DNA repair protein RAD51D
9 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0022414 - reproductive process
GO:0000723 - telomere maintenance
GO:0007126 - meiosis
TO:0000079 - lemma and palea anatomy and morphology trait
TO:0000485 - sterility related trait
TO:0000225 - stamen number
Os09g0104200 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
_ OsZIP4
ZIP4
SPO22
_ ZMM protein OsZIP4
rice ZIP4 homolog
1 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0007126 - meiosis
Os01g0890900 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
_ BRK1
_ Bub1-related kinase 1
7 Biochemical character
Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0007094 - mitotic cell cycle spindle assembly checkpoint
GO:0004674 - protein serine/threonine kinase activity
GO:0005524 - ATP binding
GO:0007126 - meiosis
GO:0045144 - meiotic sister chromatid segregation
GO:0000776 - kinetochore
GO:0007067 - mitosis
GO:0051323 - metaphase
TO:0000485 - sterility related trait
Os07g0508500 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
DRM2 OsDRM2
osdrm2
DRM2-1
DOMAINS REARRANGED METHYLTRANSFERASE 2 domains rearranged methyltransferase 2
domains rearranged methylase 2
3 Biochemical character
Vegetative organ - Culm
Reproductive organ - Heading date
Reproductive organ - panicle
Tolerance and resistance - Stress tolerance
Reproductive organ - Pollination, fertilization, fertility - Sterility
Reproductive organ - Spikelet, flower, glume, awn
GO:0006346 - methylation-dependent chromatin silencing
GO:0010426 - DNA methylation on cytosine within a CHH sequence
GO:0046686 - response to cadmium ion
GO:0008168 - methyltransferase activity
GO:0009651 - response to salt stress
GO:0003677 - DNA binding
GO:0006306 - DNA methylation
GO:0050832 - defense response to fungus
GO:0051567 - histone H3-K9 methylation
TO:0000262 - panicle shape
TO:0000207 - plant height
TO:0002616 - flowering time
TO:0000657 - spikelet anatomy and morphology trait
TO:0006001 - salt tolerance
TO:0000346 - tiller number
TO:0000485 - sterility related trait
Os03g0110800 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
RPA2C RPA2c
OsRPA2c
REPLICATION PROTEIN A 2C Replication Protein A2c
6 Reproductive organ - Pollination, fertilization, fertility - Meiosis
Reproductive organ - Pollination, fertilization, fertility - Sterility
GO:0006260 - DNA replication
GO:0006281 - DNA repair
GO:0006310 - DNA recombination
GO:0003677 - DNA binding
GO:0005634 - nucleus
Os06g0693300 Oryzabase ( IRGSP 1.0 / Build5 )
Rap ( IRGSP 1.0 / Build5 )
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