cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK072906     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0652100 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 27136284 -  27139885  ( - );   3602(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 27136284 -  27139355 ( - );   3072 (bp)
Exon 2 Location 27139430 -  27139491 ( - );   62 (bp)
Exon 3 Location 27139586 -  27139885 ( - );   300 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0652100 Os02t0652100-01 J023147K18 208972 J023147K18 11105 LOC_Os02g43560.1 AK072906 27372 AP008208.2 255670529 BAF09512.1 113537129 NC_008395.2 297600179 NM_001054133.1 115447636 NP_001047598.1 115447637


Chromosome: 2 ,  position: 27,136,284 - 27,139,885 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gaaggaggtg gccaactggg gacttgtctt ccgaatttct atcttttgcc agatcaccac 
000061 ggcatgcctc ttcctcctcc acttcaacta ccgtgccatc cgaagctact ccagatgcca 
000121 ttcgaccaag aagatcagcc cggaatccat ggcgtgatgc tctcttctga ccactgcggg 
000181 ctgtaccctc tgccggcgct tccgttaagc aactccgccg ccgccgccgc cgcaaccgtc 
000241 gcattgggga agcacagtgc agccgccggt tccatgccca atattggcgg cgctgaggag 
000301 gtaaactggc tgggctagat tttattctga ttatcaacaa ggtctctttt cttgttcctt 
000361 actaattctc atagagtatg atcttgttct tcaggtggcc accactgtaa ccaaagctgg 
000421 caatgagagt actacttgca atggctccac tacatggtac gcgtgcatat agtgaaaaca 
000481 taagatagat gcaaacccat gctgagatct ccagttgtgg gagcttgcag gtggaggggc 
000541 tcgacgatgg cggcgatggg ggagaagggg aagatgaaga tcaggaggaa gatgagggag 
000601 ccgaggttct gcttccagac cagaagcgaa gtggatgtgc tggatgacgg gtacaagtgg 
000661 aggaagtacg gacagaaggt tgtcaagaac agtctccatc ccaggtacat atgctcaact 
000721 taaccaaaac cctacatatt tgatttctta tatcatttat acatatgtgt agataataga 
000781 ttccccgttt cttatcaatt aactaattat aaacataaac agaagaatgt ctcgatgcct 
000841 atttaatttg gttaattagt aatacgcaag tttatatata ccagataaaa tatcaatttt 
000901 atatgtacag aactgagcaa tgttgatctt gttttttctc ctaaagggct tcttcagaac 
000961 atggaaaatt tgtaggattt tcacaggaaa catttcaatt tctccaaaat tctcgtgaaa 
001021 ttcctccaaa ccaaatatac caagggtact ctctatggca gaagagaatt aatgcatgcc 
001081 tggttaaact aacttgtcaa caaaggtctt gatatgaata gattagaagc tgatttaaga 
001141 caaggcaaaa tatctacaaa tataattata tatatgcagg ctagattatt acttttcctt 
001201 tttatatcaa tatagttaaa agcgatttta cagtacttaa gagatgttag gaggtgccac 
001261 cgtttttaat gtaaattctg gtacctctgt aattagtatt taaggtacta ccaagtcttt 
001321 acaatagaaa atatggtatc tcttaacaag ggaaatgtaa aattcctcat ttaatttggt 
001381 atgtgcttat ctattagctc tgtacttatg atatatatgt ttattttgct tctacctaca 
001441 atcgaaataa acgcagctac tcctataaca tattgctgtc aaattatatg atccatatgt 
001501 caaaagtgtt cgccagtata tggaaaagtt tcacacactt gtcatcagat gacccttgca 
001561 aataatctta attatgtact agttaattaa ggtccaagaa ttaattggta ttttaattaa 
001621 attggggttc actttgttat aacaatgaaa ataatctatt gagctgaatc tgacaggctc 
001681 accttctgca cagttttatt aaaaaaatat ttttaatgca aattgttaca ttttggtgaa 
001741 caagcttaat tagttactag ttacatttcg gtgacaagtt taacaaactc atcatacata 
001801 actagccgta tcagttcttt aatttatgat aggtactgtc atccctgatg cagataaagg 
001861 gacgggtcat aaatagatta aggatcgagt tcttaccaca aatattctga atatgcatgt 
001921 atgagaagga gtcttggggt aattaattaa ggtataacgg atcctaatat tggcaccatg 
001981 aaagagagga ccctaaattt gcaaaactaa ggacgatgca tgccattcta cacactcata 
002041 caacacaagt agtgtaagcc ttagctattt catgcgataa aataaacggc aattagcagc 
002101 caattaacat aggcacaaaa ggtacattaa taagaaagat gcttcagttc caaattcata 
002161 catccgtttg tgagaagctg tgttaggagt atactgcact gtatctggca tcttatatat 
002221 ctatgtataa tgttcatata atgatactat ttctttatct cattaaacca tatcacctca 
002281 attgtctttg acacttagat gattaattta tggtccaaat tatttttatc attttctttc 
002341 tcatacgaag ttatatcacc ttagttttgt ctttagatga ttaatctata ttatttctcc 
002401 ttttttttat tttgtcgttg aggcatatca ccttagtttt actttttaat gatcaattta 
002461 tatatgattt aaattattaa aaatcacgcc atctaaacta tttttaactt ttttcatggt 
002521 cgatcaaaga tgaaaattat ataaaattac gtcatccgtc atctagctat ttttacatgt 
002581 tatttgttct attattatac agaacttccg ctgcgatgcg cgggcccaat ctaactccca 
002641 tctccttgca gaactcgatc gataaaaatt aattaatgtt gtcaattagc taattacgtc 
002701 gcatgcggga gtcatcgcac tgccaaatat ctaaaaaaac atgtaatagt cctttcattt 
002761 cagtaaataa acacatctat atttttttaa tctatatatt agattgagaa atggaaattt 
002821 gttagtcagt actccctccg tcccctagta taagggatag actagtactc catccgtttc 
002881 ataatgtaag tcattctagc attttctaca tttatattga tgttaatgaa tctagacata 
002941 tatatctatc tagattcatt aacatcaata tgaatgtggg aaatattaga atgacttaca 
003001 ttgtgaaacg gaggaagtat ataggaggac accatgaata taatctcttg ttttgcggag 
003061 cttctgatct gttggagatc agaactacaa acaggcattt ttgtgtgatt tggatgtaca 
003121 catgccaaaa ctgatcgacg atatatatat gaatgcgcat atgcatgcat gcaggagcta 
003181 cttcaggtgc acgcacagca actgccgcgt gaagaagcgg gtggagcggc tgtcgacgga 
003241 ctgccgcatg gtgatcacca cctacgaggg ccgccacacg cactccccct gcgacgacaa 
003301 ctcctccggc gagcacacca actgcttcag ctccttctga agattttagc actttgcatt 
003361 ttcgtcgttg atccatccat caatatatat accgtcgtat acctatatgt ccaccgtttg 
003421 atcgattaac tgtggctagc tctagctctc tttcattttg atggttgaga tatataggcg 
003481 acgtaatatc gagccatgcc tgcgcaatgt accagtactg ctagctatac gtgagatgta 
003541 ttgcgtgcat gcacgtacaa tttacaagca gcagtcaata aattaagcta tgtatttctt 
003601 ct

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ720257 whvd7g11 792
more... (Total Hit Count: 3 )
/rice/oryzabase