cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK071969     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0735200 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 31531091 -  31534656  ( - );   3566(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 31531091 -  31531357 ( - );   267 (bp)
Exon 2 Location 31531541 -  31531700 ( - );   160 (bp)
Exon 3 Location 31531794 -  31531885 ( - );   92 (bp)
Exon 4 Location 31531973 -  31532047 ( - );   75 (bp)
Exon 5 Location 31532175 -  31532303 ( - );   129 (bp)
Exon 6 Location 31532420 -  31532507 ( - );   88 (bp)
Exon 7 Location 31532622 -  31532728 ( - );   107 (bp)
Exon 8 Location 31533149 -  31533197 ( - );   49 (bp)
Exon 9 Location 31533306 -  31533409 ( - );   104 (bp)
Exon 10 Location 31533612 -  31533651 ( - );   40 (bp)
Exon 11 Location 31534342 -  31534656 ( - );   315 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 UniProt
Accession No		 UniProt Entry
Name
Os02g0735200 Os02t0735200-01 207899 J013083D11 9092 LOC_Os02g50240.1 AK071969 31636 P14656 GLN11_ORYSJ
Os02g0735200 Os02t0735200-01 207899 J013083D11 9092 LOC_Os02g50240.2 AK071969 31636 P14656 GLN11_ORYSJ


Chromosome: 2 ,  position: 31,531,091 - 31,534,656 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gttgctaggg ttcaaccgta taatcgtacg tatactgtac aggtacagat atacgcgaag 
000061 aatcattttc tttttctgaa aaaaatacag atatactcga gtatactgtg cgtgccaact 
000121 tgtttcttcc ttccggtcgt cgtcgccatt atattgccgc cttccccgat ctccaagccc 
000181 tcgcaccacc ctccttgtta cagctgtgcc gcctcttgct tcctcctcct catcgtccgc 
000241 catggcttct ctcaccgatc tcgtcaacct caacctctcc gacaccacgg agaagatcat 
000301 cgccgagtac atatggtact atgatattat tgttatcttc ttcttccttt cggatctctt 
000361 cttggctctt ggttttgatg gttcttttca tggcgacgaa cgggttattg ttttcttggt 
000421 tttgatgggt agggatattt cgggggattt cgggaggggt gctcctcata gtttgtgcgg 
000481 attcgtagaa ggtttcgttt cttttcgctt ttccactcga tgactgaagc ggcggcggcg 
000541 gcggcggtgg tgatcttgtt gttcttctct tcctctcctc tgctttctcc tgttcatgtc 
000601 accaccgagt aaaaatcgtt cttttccgtt tctttttttt ttcgccgtgg attactgttc 
000661 aaccccggtt ttcttgatac gcttgacgag agatggagat tacgagtacg agcagtactc 
000721 tcttagtttt tgtccttttg ggggaggatg atctctgaag tggcagcctc tgtctgccac 
000781 ctggtcctct ctgcgccacc atttggccac ggcgagatgc tctcttgttc ggttggtgca 
000841 tggatttaaa tctcatcccc taatcacgcg tacttttggt caaagatgca aagctttcga 
000901 tcttaaccac cttcagatcg caagattact gttttttggt gctcattaag ccatggtgat 
000961 aactgataag tggtgttttt ctttttctcc ttgtttttaa tgcaggatcg gtggatctgg 
001021 catggatctc aggagcaagg ctagggtaag ataagattcc cagaacaagg accccatgat 
001081 cctgtttgtt actactcata tgtcttatca ctttttctgc caagttatcc actggctgag 
001141 ctgttcttgc gcttatatta tcatccagag ccttgctact cctaaacaga ttagattctc 
001201 tttttttttt atcaatcata ttaaattttg gttggttggt ggtgcagact ctctccggcc 
001261 ctgtgactga tcccagcaag ctgcccaagt ggaactacga tggctccagc accggccagg 
001321 cccccggcga ggacagtgag gtcatcctgt agtaagtatc ttttcatggc aaatcagagt 
001381 gaaaaaaata aactctgttt ttttaattat gtttttactt tggatgcaag cagtaatttt 
001441 ttgttcttcc atcttgcagc ccacaggcta tcttcaagga cccattcagg aagggaaaca 
001501 acatccttgt aagtggtgac cactttttca gtttgtcatg gatgtgattt atattctgca 
001561 gtgtacatcc atctctgttc atccagatca gcacatgtct ataaaaactg tgtgctgatt 
001621 tattcggttc aaactacata tgggatgtac tagtagatgc accactgaag gggggaaaaa 
001681 cttaatttaa tcacttcagg tgtaaaagat gaactatttt ttgcactgtt gaacattaaa 
001741 ttttcttttt ttacctgttt ctgatgtcat gggatgtgat cttgattagc gctttcactg 
001801 tatttttgac tcctgcgatc atctgttcta cctaacctta tggctagttg aggaatgaat 
001861 ccaatgggtt gtttcgtcac catctcgaat aattggcact ttattttcta aattatcgta 
001921 attcacaggt catgtgcgat tgctacacgc cagccggaga accgatcccc accaacaaga 
001981 ggcacaatgc tgccaagatc ttcagctccc ctgaggttgc ttctgaggag ccctggtatg 
002041 cccactaatc ttttttgccg aatgattatc gcaacgtgtc acagccatct cagcataatt 
002101 ccctttctca taatggttag ttgatcttct ttgttcttgc aaattatagg tacggtattg 
002161 agcaagagta caccctcctc cagaaggaca tcaactggcc ccttggctgg cctgttggtg 
002221 gcttccctgg tcctcaggta caatcatttg tctgtttgat tgtggcttaa ttactaaact 
002281 gatatggtca aaccaatctt caagtgtgac ctaactaata ctgatcttac tctttttgtg 
002341 tgtgcgtatt cagggtcctt actactgtgg tatcggtgct gacaagtctt ttgggcgtga 
002401 tattgttgac tcccactaca aggcttgcct ctatgccggc atcaacatca gtggaatcaa 
002461 cggcgaggtc atgccaggac aggtgaacac tactctcaaa ccttgccatt tctatcgtct 
002521 tgaattagtg gagtacattt ctgaccatgc taatatcgtg atcagatcta taattggtaa 
002581 tgttattaac attgtgatcg gtttttcagt gggagttcca agttggcccg tctgtcggca 
002641 tttctgccgg tgatcaggtg tgggttgctc gctacattct tgaggtatgg ataatgacat 
002701 tcttctatca atatctcaaa ttgtgattca gaacggtctg atcgaatgcc actgccccta 
002761 atttttttca gaggatcacc gagatcgccg gagtcgtcgt ctcatttgac cccaagccca 
002821 tcccgggaga ctggaacggt gctggtgctc acaccaacta caggtgaggg atgcttgaac 
002881 atgaacagat tgatatggtt tgtgttactc tttcatatta tactactctg ctgatcacga 
002941 tcacgtcggc tttcagcacc aagtcgatga ggaacgatgg tggctacgag atcatcaagt 
003001 ccgccattga gaagctcaag ctcaggcaca aggagcacat ctccgcctac ggcgagggca 
003061 acgagcgccg gctcaccggc aggcacgaga ccgccgacat caacaccttc agctgggtac 
003121 gcgcctccgt cttcttcttc ctcctcctct gaaacacctg aaattcatgt caaattacaa 
003181 gtcccgatca tgaaaaacac ctgaaattca tgtcaaatta caagtcctgt tcatgaaaaa 
003241 cagctgaatt tcatgtcgaa ataagtcctg atcatgaaaa cacaaacaaa tttttgcagg 
003301 gagttgccaa ccgcggcgcc tcggtccgcg tcggccggga gacggagcag aacggcaagg 
003361 gctacttcga ggatcgccgg ccggcgtcca acatggaccc ttacatcgtc acctccatga 
003421 tcgccgagac caccatcatc tggaagccct gaagcggctt cttgacgcca cgacatcctc 
003481 gtcatcgtcc tccccagctc gccgtgtcgc tccggttgct ccattgatcg gacgatctgg 
003541 tgaattgcat ttgtgctggg agaagt

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
BJ481876 bah62f11 635
more... (Total Hit Count: 68 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ925214 whchan26j21 729
more... (Total Hit Count: 388 )
/rice/oryzabase