cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK069768     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os02g0817700 ( IRGSP 1.0 )
RAP - Chromosome No. 2
RAP - Location, Length 35936876 -  35941193  ( - );   4318(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 35936876 -  35937522 ( - );   647 (bp)
Exon 2 Location 35937642 -  35937725 ( - );   84 (bp)
Exon 3 Location 35937871 -  35937979 ( - );   109 (bp)
Exon 4 Location 35938068 -  35938191 ( - );   124 (bp)
Exon 5 Location 35938661 -  35938757 ( - );   97 (bp)
Exon 6 Location 35938879 -  35939011 ( - );   133 (bp)
Exon 7 Location 35939158 -  35939235 ( - );   78 (bp)
Exon 8 Location 35939325 -  35939432 ( - );   108 (bp)
Exon 9 Location 35939515 -  35939582 ( - );   68 (bp)
Exon 10 Location 35939685 -  35939783 ( - );   99 (bp)
Exon 11 Location 35939883 -  35940009 ( - );   127 (bp)
Exon 12 Location 35940127 -  35940211 ( - );   85 (bp)
Exon 13 Location 35940801 -  35940877 ( - );   77 (bp)
Exon 14 Location 35940986 -  35941193 ( - );   208 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os02g0817700 Os02t0817700-02 J023030K20 205509 J023030K20 4965 LOC_Os02g57260.1 AK069768 2280 AP008208.2 255670529 BAF10437.1 113538054 NC_008395.2 297600179 NM_001055058.1 115449668 NP_001048523.1 115449669


Chromosome: 2 ,  position: 35,936,876 - 35,941,193 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aagtaatcgg cgctttcgcg agagagagcg atacgaacaa gagaaaatct tctccagaca 
000061 ccgcggcggg cttccccacc ccatcggaag gaagaagacg accagctcgc gcgctcggat 
000121 ctcagccatg gagaaggcga tcgatcgcca gcgcgtcctc ctcgcccacc tcctcccctc 
000181 ctcctcctcc gaccaatcgc tcctctccgt gagtcaattc ctcttcctct ctctcgcaat 
000241 tctctttgta atctccatct ctctctctct ctctcactgg actcaattca attcgattgt 
000301 tggttgattg gttcaggcgt cggcgtgcgc cgccggggac agcgccgcct accagaggac 
000361 ttccgcctac ggggacgacg tcgtcgtcgt cgcgtaagct tttacatccc taatcccttt 
000421 ttttttccta ctactacctg ttattactta cacggaacac caattaaggt cacctgttaa 
000481 tggcggatgt ttgactacca ctagttgctg ccatgtttga ggaatagtag taaattcaag 
000541 caactgcgct gattgacttt tcttacgaat caggattact gtaggtgctt ggtatcgcga 
000601 tgtacgccca tccaagtcaa atgcgttttg ttgaagttaa cctctttagt tttaggataa 
000661 accttgtact agtagctgaa atcatactaa atcaagagtt tgttaccccc gcaaaaaaaa 
000721 aagaagagtt tgttactgct attttgcaac aagataaaag atcgcaaact ctacaagtca 
000781 attctatctc ttcaccacct atcacccaaa gtgtattaca aactacaagt tctaagcttt 
000841 gttttttttt tagtgtttct tttttggctg tagcatgttt tgtgtgctta gccatgtgaa 
000901 tatgccacca cgtatctgaa tcgatcaacg gatgtgatag atactcttct aaccacttta 
000961 ttccatgttt atccacctgc agtgcctaca ggacacccat atgcaaggcc aagcgaggag 
001021 gtttcaagga tacataccca gaggaccttc ttactgttgt tctaaaggtt tgcgcctgct 
001081 aatattgccc ttcatgtatg ctgtgattca gtggttactt cgaatttaga gactatgcgt 
001141 tctcaatcaa tcgtttgctc cttttttttc tatgtatttt ctaggctgtt ctggacaaca 
001201 ctaagatcaa ccctggtgaa attggtgaca ttgtagttgg cacggtgcta ggtccaggct 
001261 cgcagcgtgc aatcgagtgc agggctgcgg ctttctatgc tggagttccc ggtaatactg 
001321 tgtttgcggt tatatcacca tatgaagaca gggcttcttt attatggaca ctggtttcat 
001381 ttgcttgatt ttacttttct gtcgatgcag aaaacgttcc tgttagaact gtcaaccggc 
001441 aatgttcctc tggattacag gcagtggctg atgttgccgc ggccattaaa gctgggttct 
001501 acgacatagg taattaacta gttactcgtt ctagacaata tggttatgct aactctgcta 
001561 catggttgct tcatttaaag gtgctaattt gtctttttcc atcaaaaaca gggattggtg 
001621 caggcctgga atccatgtca gtaaatgcta tgggttggga aggacaagta aaccctaaag 
001681 tatgaattct atgagcacca gagcatcctc tgtatttctg ttgttctctg gtgatgcctt 
001741 gtaacaccac gtactttgta ggtaaatgaa gtccagaaag cacaggattg tcttttgccc 
001801 atggggataa cgtccgaaaa tgttgcgcac cgatatggtg taacaagaca agagcaggat 
001861 caggctgctg tgagtcactt gcatacattc tgtttgtgtt ttttcttccc actgcttcct 
001921 tttactcaaa acactgtcga aatttttgtt tttaacaggc tgagtctcat aggagggctg 
001981 ctgcagccac agctgctggg aaattcaaag atgagattgt tccggtgcct acaaaggtaa 
002041 gaggctctgg gatttagttc atgtgatgta acctagttta ttgttcatgg ttattgttga 
002101 ctcatgaatg gttgttgtca ctggattttt cttttgctaa tcaggacctg tgcaaggttc 
002161 actgatattc tttcctgtgc agattgttga ccccaagact ggagaggaaa agaaagttgt 
002221 gatatcagtt gatgatggaa ttaggccagg gaccacagca tctggattgg caaagcttaa 
002281 accagttttc cggaaggatg gtaccacaac tgcaggtatt gcagcactct tagctttttt 
002341 ttctgctgac actactattg caaccaggct ttgtttgtcc attgcttgtt acattgtgta 
002401 tgtgtttttt ttttttaatt taacgaatct atgtaggcaa ctctagtcaa gtgagcgatg 
002461 gtgctggagc tgttcttctc atgaggaggg acgtagcgat gaagaaggga cttcctattc 
002521 ttggtgtttt caggtgctgc attttgcatt tccttgtata tacagcattt ggttcagtct 
002581 taacatgtgt tcctgaatgc tgtatgagat actccctcta ttccaaaata taaggcacaa 
002641 ccacccttaa cccaaagacc aagaaataat tattatcatc ttgtagtttg gatcatccta 
002701 ataaatataa tgcatgcatc caataggatt agatagcatg agagtggagg atttaaaaaa 
002761 gtaataattt aatggagaag atgtcatagt taattgcatg tttgcatgta taccttatat 
002821 tatggaacat ctaagaaaag tggttgtgcc ttatattatg gaatggaggg agtgtatctt 
002881 attgttaggt gtgaacggag tttgtgatca tcattgttat tgctattgct gttgggacct 
002941 aatatattat cacattttct tttaactgat ccatccatat gttgcctcca atcatcattt 
003001 aggagctttg ctgctgttgg agtagatcct gctgttatgg gtgttggtcc tgcagtagca 
003061 ataccagctg cagtgaagtc tgctggactc cagattgaag acattgatct gtttgaattg 
003121 aatgaggttt gttacttttt acaatattag ctcactcgtt tactcgtacc tagctacaat 
003181 ggttgatacc catgccatct gtattcttgt ataggccttc gcttcgcagt tcgtgtattg 
003241 ctgcaacaag ctgggactgg acaggtcaaa agtaaacgtg aatggaggcg caatcgccct 
003301 aggacatcct cttggtgcaa caggtaatca aatacttgta tgggagatcg tcattctggc 
003361 tttagaatgt gcaggtgtca atggaagtag cattgctgtc tgttagtacc tgctacagat 
003421 catccaagca tgtcttctaa atggggtgat tgttcctctg ttggtcaggt gcccggtgcg 
003481 tcgcaactct tctgaatgaa atgaagcgcc ggggcaggga ctgcagattc ggtgttgtca 
003541 ccatgtgcat tggtgagttc tttttctctg gatttctctg tgtgcaggag aatgcatgca 
003601 agtagccctc gttgttaaac ttccatgaca tcttgtgtac tagtatgtaa ctatgcatga 
003661 attggttgca ggatctggca tgggggcagc agctgtgttt gagcggggtg actcggtcga 
003721 ccaattctca aacgtgcgcc accattagcg gcagttttct aagagaaatg caaagcaaag 
003781 cagtggtgca aaatcatcat ggtggtcagt ccaatggagc atactctggc agtaagatct 
003841 ataccgaaaa ctaaatgcag gaaacacgta atcttctccg gtgaaaggtg taacagtata 
003901 ttgaagatct tttcatgtaa cattttgcac taataataat ttatgcgaat aaggggcatg 
003961 catgctcaat gtttgttttg tcaagtgttc cacacgaaac actgagagga gcacagtggt 
004021 tgcaaatgtt gaagggcctg ataagggtag gcctgatcat ggataatttg gcccaaatca 
004081 aatctggcct ggcctgatcg ttgtccaaaa tacttagtac tactttctct gtaaaaaaat 
004141 aatacagtat aaaacaattt attttgcttg ttaggacaat gctttaatca ccaactgctt 
004201 tattaatata ttatatttat gtgacacaga agtataatta caggaaagca tttgtgaata 
004261 taaatctaat agcactcatt acttttgaat gtaaatctaa tgacattaat tttgtctc

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Barley ESTs
Acc. No. Clone Name Length
AK251228 FLbaf111n05 1726
more... (Total Hit Count: 44 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ948891 whchul24f04 698
more... (Total Hit Count: 222 )
/rice/oryzabase