cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
General information
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RAP - Accession No.
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AK242339
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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RAP - Chromosome No.
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1
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RAP - Location, Length
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1983 -
9815
( - );
7833(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
1983 -
2268
( - );
286 (bp)
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Exon 2
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Location |
2354 -
2616
( - );
263 (bp)
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Exon 3
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Location |
3357 -
3455
( - );
99 (bp)
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Exon 4
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Location |
4457 -
4560
( - );
104 (bp)
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Exon 5
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Location |
6136 -
6944
( - );
809 (bp)
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Exon 6
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Location |
7028 -
7150
( - );
123 (bp)
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Exon 7
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Location |
7232 -
7320
( - );
89 (bp)
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Exon 8
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Location |
7408 -
7608
( - );
201 (bp)
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Exon 9
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Location |
8210 -
8615
( - );
406 (bp)
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Exon 10
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Location |
9102 -
9187
( - );
86 (bp)
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Exon 11
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Location |
9274 -
9430
( - );
157 (bp)
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Exon 12
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Location |
9504 -
9815
( - );
312 (bp)
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Chromosome: 1
, position: 1,983
- 9,815
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcagaattcc tccatttttt actgttctgt attgaaacga ctgcgtgatt accactagtg
000061 ctttatacac attcctcatt cattccttct ctctccacca atagctgacg caaattgttt
000121 ggcaaaaaga aaaaacaact agtactccac ttttatcaga aatcaccacg gaaagtgcca
000181 aggcagatgg gctggcacca caaaaacaat gacaacatcg atcgatgcta caccaacatg
000241 gcggtcttct ctattatcct tccaccgctt cgtctcttgt tttcaagtat actgtgcata
000301 tgtacagatt ccctgaaaca agacaagcag attatgtacg tcatccatct ctaacaaaac
000361 ataaacagaa agagggaatc cataccgtga gtatacggat tttttttgga cttctaatga
000421 atatataaag ttccatcacc cataattacg agaagttcat ggttgaaaaa catctagttc
000481 cccagggcga tttctcaact tcagtttcca ctttttcatc attccgagcc ccccttcaat
000541 aactgtatcc caagaccaaa ttagaactta ccttgtaaat atacctgaaa aacatggatg
000601 gtgctcatgt atgcttatca caatttacct tgtaaatata cttcttcctc agcttgatag
000661 ccatgcgtac gcatcttttt acattgatct tcagcatatt atcattgaac atctatggaa
000721 aaaattgacc aactcaactt caggagtgca aacaataaac atgcattaat atgccaataa
000781 gttgcattat aagtaaacct gactatactt tccttaactc ttcccattta agtggaagac
000841 tgctcagcag agtcaatatc accactatat acaggtttac ccatcttttt ttccaagagg
000901 gagaaaggct gggcatcatt tttaattagc agttgccgta acttgtaaat attgatagtt
000961 atcagaatga aataagcatc ctctaattaa acccatcaat tcagcagagg acaaaatcaa
001021 tagtcattta tgcagaaatg atcggccata acatgttatt gtactgtctg agcaaatttt
001081 taattttgcc taaaatgaat tccacaaaat ctaatgcaaa tataggtaac tcttggtagt
001141 aatttcatgg atccgaggtt tgtaaacaat atgaaaggaa gttgtgactt aaacttgcct
001201 tgattgcatc atctattgag cgagtttctc taattatctt gtggcgattg attacaagga
001261 ttgctgctac gcagaatata ggcagatcat catctccatt ctttgctaac acatttgtgc
001321 ttatatgtgg catctgctga tgtcttgccc aaatagtagc tcctgacaag ccacagaggg
001381 gatttcttgt attgggtttc attccaaggt tgcaagctac acgcatttca ccatttctat
001441 gatggggctt cctgcttttg gactttcttc ttgtgtaact gttcacccgg tgctcttctt
001501 tcacctcaca tgataaatca ttcctcatat ctaccagcaa tggctccaga caattctctt
001561 ccaaatgtaa aatcacatct tcattaaagt cagcagccca catcatctga aagcaagaag
001621 cacggttggt taacagatca agactgcagt gtgaagagca ttttataagt aatgttccct
001681 ccgatcataa atatttgatg tttagaacaa gatttggtca aaacttttga aactgaccat
001741 caattttata tcagaataag actataaaat ctaataagtg tatcatatta tgacactaat
001801 accttgcaag gcaaatctcc gcatatcttt ttttgtgttt ttataagcta cgcatttgag
001861 ctgttattga cggtcaaaat tttaaaagtt tgaccacatc ttgtcctaaa cgtcaaatat
001921 ttgtgacccg agggagtata aagttcacat gccacatgat atcacaaaca ttaactacaa
001981 tcgtaatgaa ccatctacct acacctctga tgattttgaa cctaaatcga agatgtaccc
002041 tattttacta tttgaaatat ttaactagta atacaatttt tgaaataaaa aaggcttaac
002101 caacatcccc tagacctaca ccagctgaca aacaaacatc cattagagct ttcctacgaa
002161 gaacaacaac tgaaaaaaga taatacatgt gtcttcaaat gccacacctc ccacatgcta
002221 agtgactcct caaaggacag ctctcgacga aaaagcacta gcagcatccg gaaagcaaaa
002281 tgaaggcttt cagcaccaat tgttgacaaa tgttcaaata attctacatc agttatttcc
002341 atgatcttcc acaatgcttg caactgcttc ataactcctg ttggtccctc catctggaaa
002401 ttttcacgct gaagtggaac agggcacata ttatgcatgg agtaacatag aaaccaaact
002461 aataggcaac aaaatttgaa atatatgtga attaccatcc ttctcagtag catctcaaag
002521 caccaaaagg catctgcatc atcctcatag agaacaacaa aaggtgaaag tagatcactc
002581 atacctgtta gcaacttatc ccatttagac acatcaagaa accaaaaagg aagtaaaaaa
002641 agatgccact gaaatatgca tataccttgg caatacccgg tggaaggatc aacccatgca
002701 taaactgcaa gtatatctga catcctagcc atatttcttg attctccata gaaatcaaga
002761 tgactatccg ttctaaccac atcaaccact gtaataggtt ttgcaaatta gaacataatc
002821 acaagatacc actgtaattg catgatgaag tgaagaaaaa atagagcata ccaattcggt
002881 gcagtgtcca aagccattca gagactcgat ctttgctggc aaccacactg ttggatttgg
002941 ttccatcaac aaaatctgct tctggtgcat cagatatcct caaggaatct ataacttccc
003001 tgttatagcc attatcatct aaccatctat cctgcttgta tgcatctgag tgaaagatgg
003061 ctgaatcact gttgctagcc ctaaacacat cactggagca tgaatttgac tctataatga
003121 gatctatgtt attattgatt tggaagctgt gcatacgttc atcacggtgc cttaatctat
003181 cttcaggaac tgagaaacta caatgatttt tatcaactcc attgctgccc acaccatcag
003241 ttgagaaaaa atttgtaaca ggtagagaag gataatcatc gaaggtctca gtgtcatatc
003301 ttggttcacc catgtcattg taatcctgag aatcttttga gcaattattc acttctgtag
003361 aagacacaat aaaattggaa gaatcataaa gagaggtatc attatgtacg ttgaaaccaa
003421 ctagttcagc tgatttacta cagctttccc ttttttgtga ctgctgtgca ccaccggggc
003481 cataatctga atcttctact aaactgccag ctgtattttg tgaagtttgt tgacttgtgc
003541 taacttcttc tgcaatgtgg gtttcttttg acatagtcct gacatccatt agctttgatc
003601 caacagcgta agcaagctca cctgtaccaa tgcttgggtg catgctctgg cactgtctaa
003661 ctaaaatttg atatttttcc ctgcatagaa gcgaagaaat aaacgaggtt acaggcttcc
003721 ataattgtcc cacaggtgta aaaactttca aaagaaagaa cactcagcaa gaatttcaga
003781 actgtactga ttgccctgct ccgtagaaat ggaaacaaag gaataaaaac acttgtgcga
003841 tggcatttca cggaattcgc attcatcagc aacaattagt agaatcggta acaaaggcaa
003901 aacgtagaat ttctcgcaca acaattggta tggatggcat acatgatgtt ggttataaat
003961 ttgttggtca caagtgaata aaacaagcag atgcaaacag aaaggactaa tcgcacgcca
004021 atcaattcaa catgaacata tgacgtaata agtttatctg taatagcaca ggtacgcttc
004081 gatagttaga cataaaaagg aatataaata tgcaattata attacagaga tcacaataaa
004141 ctaaggtata tttgcattac taattagtgt gcaatgccaa cccatctact taatttcttt
004201 aatacgcatc cttccattac aaagaaagag ccattggcac tgttggctac cacgtactac
004261 agaatttaat gtcccaggtt caaaccccta tgaacaacat attttctgtc cagcacctgc
004321 tagtgaatgg ataatgggtt tgtgaacagg ctgtttggaa ctgttaaatt tccaagagaa
004381 ttctattctg gcaactagtc ttagaaattt tctgctccag gtttggtgga tcatatccaa
004441 cccgatatca cccacaggcc atgaccacaa atacctagga attgtatgca atatctagaa
004501 tctcagtctt tcatttacct ctaccctaga tgtattgata taatctgtca tattgttgtg
004561 tgcaggcacg gggtacttat caagccatct aaaccaaatg gatcatacaa catcagcaca
004621 agtagatgtt acatagacaa actatgagta ctgatgccac caattcatcc ccccaacaat
004681 gtgtatagga ggtagcacaa tgaaaagggg taaaccctaa accctaatca agttactttg
004741 agtgcctgaa aaagattgag attggtactc cagataaaca tagcaacaca tttgttttaa
004801 acttttaata tcattttcca ttctgcacac atggttataa ataacacaag gaaaatgtaa
004861 aggataggaa tatttaccta gaagttcagt tttagtacaa taaacaaaaa acaaacaaat
004921 taatacctac tccctccttt ccaaaatata aagatttcta ggttgtttag ccaataccaa
004981 ggttaggtca aaagattctt ttccctttct atgcatttga ttggtttggg aatcactgaa
005041 atgatgggta ttatgggaat cagtgcagaa atccttatat tgtggtacaa aatttgaatc
005101 cttgaaatcc ttatatattg gaatggaggg agtactacat aactgtaaca ttcatgattt
005161 tattctagat aataaatgca attcatttat gctcttacgg tcttatgctt gtacaaaaaa
005221 ggtatcctgg tactgaaaac aggaaagtgt caaaccttct aacagctctt agtttcctcc
005281 tatactctga ggtactactc aaggcatagc agccaagaag aaattcccaa acttcagctc
005341 gaatagtggg atccacaccc tgcacatcaa ttttgggggt aagaaatgtt ttaatgtgaa
005401 gaatagtacg atgcgatctt attgttccta gtttatagac aattctttag atagtgccag
005461 aacacaaaaa aatgatatct gtgcaaagca tgagttaggc acgatatgat aattttgatg
005521 cattgcaaag catggagcac atctatcagt gccagtggtg tatagaaaat aacaacacta
005581 atcactaatc aaggaaaata actacatgca ttaaacttag tctgctgcaa aaatgatcaa
005641 taatccatgc ctaaaatata gacataatta aactaaaatc tgatgccttt tttttccaag
005701 atatggccaa tgaactctga ttgaccttcc tataaagata ctaattgcaa agctgtggac
005761 gtgtttgctg tggagaccgt gtcagtttgc tttcacgaaa caagacttga tagcagctca
005821 ttccacatct ccactatatc taatttctat aaggttatac caaatggctt ttcagttagg
005881 ggaaagctta tgtgaaggta tgttcaaatc ttgcttattt gaagcagtta tgtatttatg
005941 taacttttat gtatttataa gcagtttcta cacattggat ttttttttgt atttacccac
006001 aaacaaatgt ttatgcctag ctacatacac aggtaaaagg caaacactct gtgacataat
006061 agtataaaga gcctagccgc ttattttttt aagaaaaact agagctacgc aatcatatgc
006121 attaatttct ttgaaatttc caaagcagac actctcaaag agaacaatga tcatggtaat
006181 aaaataaaca gttgtcacgt tctatttgat cttccctatt ttacacattc acaaatggcg
006241 cgtggggcat catgctctaa aaggtaatgt attaagactg aaaaaaaaat ccacaccctt
006301 caacagctaa aatacatgaa aaaacaagtt tttgaagcac aaaagaaaca attaactcac
006361 ccctaagaca atgaatttta gggctttacg gaaacctatg acctttccat cattatcaaa
006421 acatgtgtgc catttttccg gtttgagcat tttgctcccc tgcacaattc cagatggaaa
006481 acaaggcgtc agttttgcaa ttctgcagaa aaatgtcgat atgaagtaaa ttgcatatag
006541 aagacaatct catatactct ggtggataaa aggatatgat tagtgcaaat tagtcttctt
006601 tcagtacaat atgtgagttg acctggaaat ttatttgaat ggattgaatg ggtaatattg
006661 tataatcata gtgaatccag ggagtttgac ataatatctc cctaaaattc tctgcctgag
006721 gctaccaatg aacatttgga ccagcataaa tagcattaag aagtatcaaa atggctaccc
006781 cattgtgcag cctatgcagc atctagcctc gtgtgtgagc tcatatgttt tgcaaacatt
006841 atcttcaaag cagcagtaca actgagcggt acaggatata catatgctaa atgttgattg
006901 tatatgtata aaagtggcaa tagaaagtcc ctgggctgaa agtgttatct atacaacata
006961 tgccaaatga caaataacag gacttataca gcttcacggt atgatgatga ataaataagt
007021 gatgaagcag aatcatatac ggagtactag tatatatata ggatagagct agagaagcct
007081 taatttagag agcaatggag atgtataatg agaagtgatg gaaaacaaat tgatggcata
007141 gaatgtagac agctaatcga atccatatcc atatggagct agagtaggag taggcgaacc
007201 ttaacggggg atgggttgag gcaggggtcg ccaatgtcac ggacgaggga gccaacgccg
007261 cgctggaggt tggccatggc gccgcccgca cggccaccgg cgccgcacat ccacttgatg
007321 tagtccccag cggtatctcc gttgtcttgg cccgcggccg acgacatctc cctcgccgtc
007381 gaggagcagc tgattgctcc ctattggtat tggattaggg acagggaacg aagggagatt
007441 gaaatctgat gatgcatgcg acctgaaaag caggcaatcg aattaaatca aatcaaatca
007501 aatcaatcgg gggagggagt agggaatcga agggatggga tccctaccta ggaagcctac
007561 ctagtcagct ggttgtggct ggcggcctgg tgggcgggga ggccatagct gcgtcgtgga
007621 tccaaagctt cctcagcgag gactccttgg ttcaagggtt tgtctgcctg cctgcttctc
007681 ttattcggta gtcttcaatc caactaccga atgggatggg gggattggac aggaggcatc
007741 gatgtttctg tagctctctc cgccgtcgat catctccgcc tccgtcgtgt ttcctagtgg
007801 ggaagtcgtc gtctcgtctt cttcattacc aac
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相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。