cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK120933     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0917500 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 41750751 -  41753493  ( + ) ;   2743(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 41750751 -  41753493 ( + ) ;   2743 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXpro
FeatureNum
Os01g0917500 Os01t0917500-01 215652 J023036G04 20875 LOC_Os01g68870.1 AK120933 233
Os01g0917500 Os01t0917500-01 215652 J023036G04 20875 LOC_Os01g68870.2 AK120933 233


Chromosome: 1 ,  position: 41,750,751 - 41,753,493 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gactgggact attgatgagg catttaaagg gtgcacgaac ctcactgaat tgaacttgtt 
000061 agacaaccat attcatgggg aggtaccagg atatttagca gaattacccc tggttactct 
000121 ggagttgtca caaaacaaat tcgcagggat gttacctgcg gagctgtggg agtcaaaaac 
000181 ccttctagag atatctctca gtaacaatga aattaccggc ccaatacctg agagtattgg 
000241 taaactctct gtattgcaaa ggttgcatat agacaataac ttactcgaag ggcctatccc 
000301 tcagtctgtt ggtgatctaa ggaatctgac caatctatcc ctgcgtggca ataggttatc 
000361 tgggatcatt ccactagcac ttttcaactg cagaaaactt gccacgctgg acttgagcta 
000421 taacaatctg actgggaaca ttccaagtgc catatctcac ttgacattgc ttgatagctt 
000481 gattttgtct tccaaccagc tgtctggttc tatccctgct gagatttgcg tgggatttga 
000541 gaatgaggct caccctgact cagagtttct tcagcaccat ggtcttcttg atctgtcata 
000601 caaccaattg actggtcaga tcccaacatc tataaagaac tgtgcaatgg tgatggtgct 
000661 caacctccaa ggcaatttgc tgaatggcac cattcctgtg gagcttggcg agctaacaaa 
000721 tcttacatcc attaacttgt catttaatga atttgttgga ccaatgcttc catggtctgg 
000781 acctttggtt caattgcaag gccttattct gtccaataac cacctagatg gctccattcc 
000841 tgctaagata ggccaaatcc ttcccaaaat tgcagtgcta gacttgtcaa gcaatgcact 
000901 cactggcact ctaccacagt ctttgctctg caacaattac ctaaaccatc tggatgtcag 
000961 caacaaccac ctatctgggc atatccagtt ctcttgcccc gatggcaaag aatactcaag 
001021 tacactgctc ttcttcaatt caagcagcaa ccatttctca gggagcctag atgagtctat 
001081 ctcgaacttc acacaattgt ctactcttga tatccacaac aatagcctca ctggaaggtt 
001141 gccttcagca ctttctgatc tcagttcttt gaattatctt gatctgtcga gcaacaatct 
001201 ctatggtgcc ataccctgtg gaatctgcaa tatatttggc ctctcatttg ccaacttctc 
001261 aggtaactat attgacatgt acagcttggc agattgtgct gcaggaggca tttgttctac 
001321 taatggtact gatcataaag cattgcatcc atatcatcgg gttcgaaggg caattaccat 
001381 ctgtgccttt acattcgtca tcatcattgt tttagtgctt ctggctgttt atctgagacg 
001441 gaagctggtt agaagcaggc ctttggcttt tgaatctgcc agtaaggcca aggctacagt 
001501 tgagcctacc tcaactgatg aactgctagg aaagaagtca agggaacctc tgagtatcaa 
001561 tcttgcaaca tttgagcatg cacttctgag ggtcaccgcg gatgatattc tgaaagccac 
001621 agaaaacttc agtaaggtgc acataatagg tgatggtgga tttggcactg tctacaaggc 
001681 agcgctccct gaaggccgga gagtcgcgat caagaggctc catggtggcc atcagttcca 
001741 aggtgaccgt gagtttctag ctgagatgga gacaattgga aaggtgaaac atccaaacct 
001801 cgtccctcta cttggctact gtgtttgtgg cgatgaacga ttcctgatct acgagtacat 
001861 ggagaatggg agcctcgaga tgtggctgag aaaccgagca gatgcacttg aagctcttgg 
001921 atggccggac cgtctcaaga tctgcctcgg ttcagcccgt gggctcgcct tcctgcatca 
001981 tggctttgtg ccccatatca tccaccggga catgaagtcg agcaacattc tactggatga 
002041 gaacttcgag ccgagggtct ctgacttcgg ccttgcaagg atcatcagtg cctgtgagac 
002101 ccatgtcagc actgacattg ccggtacatt tggatacatt cctccggagt atggcctcac 
002161 aatgaagtcc accacgaaag gcgacgtcta cagcttcggc gtcgtcatgc tggagctcct 
002221 caccggacgg ccacctacag gccaggagga ggtgcaaggg ggtggaaacc tcgtcggctg 
002281 ggtgcggtgg atgatcgccc gcggtaagca gaacgagctg ttcgatccat gcttgccggt 
002341 ttcaagcgtg tggcgggagc agatggcgcg cgtgctcgcc atcgcccggg actgcaccgc 
002401 cgacgagccg ttcaagaggc cgacaatgct ggaggtggtg aaggggctca agatgaccca 
002461 cggcatggaa tgtggacctc tggtggtgac cgtctccagg gacatgtaat gctctctgct 
002521 tgatcttcct gaaactaatg tagtaataat gtagtcagta gggagtaggc taatggtagt 
002581 taggagtaac tcgtagctat agagtaaccg agctatctgg aggctgtaat gagggaaact 
002641 agagttactc atgttcaggc tgtagttgga actagtatta agacctttta tcttgtacta 
002701 ttgtcactgg tggttcctgt ggcaatgtga gtgcttaatg tgc

相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ937570 whchan27d11 702
more... (Total Hit Count: 2 )
/rice/oryzabase