cDNA ( Data source : RAP-DB )

cDNA Detail

General information
RAP - Accession No. AK108380     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0527600 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 20571069 -  20573713  ( - );   2645(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 20571069 -  20572191 ( - );   1123 (bp)
Exon 2 Location 20573425 -  20573713 ( - );   289 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXpro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os01g0527600 Os01t0527600-01 002142E05 111233 002142E05 17847 LOC_Os01g34350.1 AK108380 13993 AP008207.2 255672756 BAF05143.1 113532760 NC_008394.4 297598437 NM_001049764.1 115437171 NP_001043229.1 115437172 Q8LHH9 SHL2_ORYSJ


Chromosome: 1 ,  position: 20,571,069 - 20,573,713 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 cattttgggt actgtggtaa tagcaaagaa tccctgtctt catccagggg atgtccgcat 
000061 ccttgaagca gttgatgtgc ccgaactgca tcatctggtt gattgtttgg tgttccccca 
000121 gaaaggtgag aggccacatg ctaacgaggc atctgggagc gatcttgatg gggatctcta 
000181 ctttgtgaca tgggatgaga aacttatacc tccaggcaag aagagctgga accctatgga 
000241 ctactcccca cctgaagcaa aacaacttcc gcgccaagta tctcaacatg taagttcaat 
000301 aactcttgag atgtcagcaa tgtcccataa ttttttgttt cctacataca tgtccttttt 
000361 atacgatgga taaccctcct ttcattggaa gcatatatgg gttttcttta cagaactgag 
000421 ataaagaaat taaacgcaag ctatggtcgg gcacactggc acaccagcaa aaacagggaa 
000481 tagctttaga atctcagata tattacagca atcaaaatta agtccaaacc agagaggtcc 
000541 tcctagcatt tgtaaacctt ataggcatca tctccctgct gaactaccga ggccatttct 
000601 tcacatttgt gacttcccta tcttctttac gtagcattac cttccgtttc tgcaattaca 
000661 actttatata aagtttaaat caaccagctg ttgaaggagt acatgattaa ttgccatctg 
000721 tgtttctacc tgtccaaatc acccctgaaa aaacatcaaa cataacattt tcaaccattt 
000781 agggcctcac acctggatcc aaggaaatcc ttgattggag ttgggtgctc tgtcctatct 
000841 aagagctttt gatgcatatc catatgaacc ctgataattt gcatgtaact agcaggttat 
000901 cgcttgctca aacgctgggc aactagtctc tagtcttggt cgagtgtgtg gttgacttgg 
000961 tcgtggacat gcttggttct tagatcgtgt tttgtattca gggtttctta taccctttct 
001021 ttcttgcact gtccatattc taatgcaaat ttagaagtaa tgattttcat cttccttgtt 
001081 attttattat ttggttatac tatttgtggt ttctagctgt caacaagtaa tggttgtggt 
001141 ttccttcata gttttagtat ggttttgtga tatttacgaa gttaagcttt agcaaactat 
001201 tagcatagca tggttggtta gcgctcattt tattcaccat ctgaatttac ctcatgttat 
001261 catatattcc tacttggcaa gctgccaact tcaaattgga atatggtgat gtatttacaa 
001321 agttgttacc atgtagattg ttatttggat ttgaaatctg gcattggtga tacattttct 
001381 ccaatcgcat atgcatatag ctgcttaaaa aactgactca tattaattcc cctagtttct 
001441 gcaaattgta gatttcttga tttgtgggca agtatctatt gctataatgc atatcattga 
001501 ctagatcttg tttttgtaac aggatatcat tgatttcttc ttaaagaaca tgataagtga 
001561 gaatcttggt aggatctgta atgctcatgt tgttcatgct gatcttagcg agtatggtgc 
001621 aatggatgag aagtgtattc acttagctga gctagcagca actgccgtgg acttccccaa 
001681 gactggcaaa cttgcgataa tgccaccaca ccttaaacca aaagtctacc ctgacttcat 
001741 gggaaaggaa gatggacaat cttataaatc agaaaagatt cttggaaggc tttatcgttc 
001801 aatccaagag gcctccaatg gtgatgtggt gtcacaagag gtttgcactc caaatgatct 
001861 gccttatgac atagatctgg aagttcctgg tgcatcagat ttcctcgcga gtgcttggca 
001921 atgcaagtgt tcatacgacg cgcagctgag tgcgctgctc agtcagtaca gggtccgcac 
001981 tgaagctgaa cttgtgacag ggcacataac gttccttgtt aagaacagca gcaagaagca 
002041 aggcgacata aaggacaggc tgaagactgc ttactctgca ctacgcaagg agttcaaaag 
002101 tacctttgag agcatagcat cggatcaatg cgagattggt gatgacgaga agaatctgct 
002161 gtacgagatg aaggcctctg cctggtacca ggtgacctat caccccaaat gggtggagaa 
002221 gtcgaggggc attctgggcc cagatggtga ggaaataccg gcaagcctta gctttgcatg 
002281 gatcccggtg gattacttgg cgcggataaa gctaaggtgc catggtaaag tgagagttga 
002341 aggccaaaag cctgttgaaa ggcttgcagc atacatctcc gagaggatat gatgaaacaa 
002401 tgcaaaggtc gcagtaagac cactctgcca ttcgtaatgc cggttcaaag ggcatgcgta 
002461 caaaatatct gagttttttt ttcttttcat ttttgttcac ttcactgaac ttgatctccc 
002521 gaatgtttca gtgtgctttt gttccttctt acatgcccct caagcctgaa aaactgtacg 
002581 tttcagttga gggctgtcta tattatgaaa tgcacaaata tacgctgcct gcagcttttg 
002641 gcaat
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