更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK067982 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os10g0500700 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 10 |
| RAP - Location, Length | 19593980 - 19597763 ( + ) ; 3784(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 19593980 - 19594285 ( + ) ; 306 (bp) |
| Exon 2 | Location | 19595462 - 19595536 ( + ) ; 75 (bp) |
| Exon 3 | Location | 19596198 - 19597763 ( + ) ; 1566 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os10g0500700 | Os10t0500700-01 | 203565 | J013121J12 | 3260 | LOC_Os10g35720.1 | AK067982 | 26906 | Q0IWL9 | GRS11_ORYSJ |
| Os10g0500700 | Os10t0500700-01 | 203565 | J013121J12 | 3260 | LOC_Os10g35720.2 | AK067982 | 26906 | Q0IWL9 | GRS11_ORYSJ |
Chromosome: 10 , position: 19,593,980 - 19,597,763 bp |
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| Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 aaggaaagca gaggaaaacc ccaagccgca agcccccccg ccgcgagtcg tcttctcatc 000061 tctcctccgc cgccgccgcc tgctgctgca tctctcgtcg tcgccggtga gggaagggag 000121 gggagggggg agggcgtgat ggcggcggtg agggaggtgg ggtcgaaggc ggagctggag 000181 gcggcggcgg gaggggcgcg ggccgccgcg gtgcacttct gggcggcgtg gtgcgaggcg 000241 tccaagcaga tggacgaggt cttcgcgcac ctcgccgtcg acttctccca cgccgtcttc 000301 ctccgggtac gtgcgtgcgc tcgtgccact gctggtgtcc tccccgatcg cggtagattt 000361 gagctgttta gttcgcttag ggttatggtg tggtaaggat tttggtggaa ggttacagtg 000421 acttgcttgc tggtggcttc acatactgta tttcctacca tttgttttag tagattcata 000481 tgagatgttt ttcggatgat gaattgtgaa tcttgtttca agaatcatga gtagatttgg 000541 aattagtttg cttttatata tctgggaagt aggtatatgt ttttgagagg ttgatactaa 000601 cctggctgcc tggagttctg ccataatata gagcccatag tatataaatt attgatagtg 000661 attatttctt cgatgttctg tgtaggataa atgctattga agctgctcta cttctgtgtt 000721 tgatttgtaa ctgtggtgtt gtttctttta cttcatagta ttgtgtaggg atgtatcaac 000781 tatcaagtac aattcttctt ctttgattgc cgatccaact tgtttatcca gtttgactta 000841 ctgcaactaa ctaaagagcc agtttgactt actgcaacta actaaagagg tagttgtgta 000901 acatccttaa gcgctgacca ttttcctgct tagcgtacaa ttctttgatt gcccatccaa 000961 cttgtttatc cagtttgact tactggttga atgcaactcc tgaagaggta gttgtgtaac 001021 atccttaagc gctgatcatt ttcctgctta gcaccgattc actgtttatt ccaccttggg 001081 ttgtagctta ctgcatgtct gactagttgc tattgtgcta ggaaccatac tcttagcgct 001141 agaatatgtc ctgcaacctt ttgagttctc agtggactct gaaatctgtc aagactcaag 001201 agtatgagac aaaatataaa tatttccagt cccttacata attatgattc gttttgctac 001261 tggattattc tgtagtttca ttgagtgata ccatcaaact gagtgttata taataaatac 001321 tgttataatt cagtagctct tctttgtgac tatttttctt tgggcattac ttatattcct 001381 attagtctct ctagtaattg ttaatcactg tattatattg tagaatttga cttctatatc 001441 atttgcttgt ttgttttctc atacactagt aacttttgtc aggttgaagc tgaggaacaa 001501 cccgaaattt cagaggcata tggagttaca gcagtgccat attttgtttt cttgaaggta 001561 ttcgcaactg cctttatata atttgttctg acacgaacca tttcacatag ttatatattt 001621 ttgcataata acttctggta ggatcatgat actcttcctt actaacttga tgcggatgag 001681 ttctagcctt gtataatgct agtatggcta taatgctgaa taagtagctt gtattcttcc 001741 aacaagatga gaggtgcaat aattttttta ttccacaaaa tagtgatcag atttgcttgc 001801 tcatataccc tgaagtaatg agtttggatt gtctccactg acattagctg cctacagtga 001861 agttaccatt ttttagaggt gcagtaaaga ttctaccttg ttgtgtaatt tagtgcacca 001921 taactgtctg cactaaagac tccttatgaa tgtatcttat gacatctgat gaggtgtgtt 001981 gtctgatggt gtaacacaca gtctctctca attcatggac ttacaatcag tatgagctgt 002041 gaattgtgct cttgaaccaa tgcacctgat catatgatta ttactattaa agcttgcatg 002101 cataggtcct ttagtatatt gctgaatatt tgttagcaaa ttatttgaaa tatcagtatg 002161 atgcttttta cttaaagagg ttgtcatctt tgtgtctttg tttttttggg gtttgcagga 002221 aggtaaaact gttgatactc tggagggtgc aaatccagcc agcttggcca ataaggttgc 002281 aaagttagct gggcctgcca gcgttgctga gtctgctgtg cctgctagcc tgggtgtggc 002341 tgctgggcct gctgtacttg aaaaggttca agagatggca cagcaaaatg gagcttctgc 002401 cactagtagt gcagaagatg cattgaacaa gagattggag cagcttgtca attcccatcc 002461 cgtcttctta tttatgaagg gaacccctga gcaaccaagg tgtggtttca gtcgaaaagt 002521 agttgacgtt ttgaagcagg aaggagttga atttgggagc tttgacatcc taacagataa 002581 cgatgtacgt gaaggaatga aaaagttctc aaactggccg acttttcctc agctctactg 002641 caaaggtgag ctgcttggtg gatgtgatat tgtgattgct atgcatgaaa gcggtgaact 002701 gaaggatgtt tttaaggagc acaacattcc gctgcagcca cagggaagca aaaacgagga 002761 ggcagtgaaa gccaagcctg atactgagaa gagtggtgca gtttctgaac cagctttgct 002821 tactgcagct cagaaggaac gcttggaaag ccttgttaat ttcagcacag tgatggcatt 002881 tataaaaggt acacctgagg agcccaagtg tggattcagt ggaaaactag tgcatattct 002941 taagcaagag aagatccctt tctcaagttt tgacattctt acggatgatg aggttaggca 003001 gggtctaaag cttctctcaa actggcctag ttaccctcaa ctgtacataa acggtgaact 003061 ggttggcgga tcagacattg ttatggagat gcataagagt ggggagctta agaaggttct 003121 atctgagaaa gggatcgttg cgaaagaaag tctagaagac cgcctgaagg ccctgatttc 003181 ctctgcccca gtgatgctct tcatgaaggg caccccagat gccccccgct gcggcttcag 003241 ttcgaaggtt gtgaatgcac tgaagcaagc aggagtcagc ttcggagcgt tcgacatcct 003301 atccgacgag gaggttaggc aaggcttgaa gacgtactcc aactggccca cgttccctca 003361 gctgtactac aaatcagaac tgattggagg ctgtgacatc gttcttgagc tggagaagag 003421 tggagagctg aagtccacgc tttcggagtg aggaaaattt accgtcgtat ccgcatcttc 003481 ctcttcctgg tgtttctacc atccgtcgac catcgagttt gctctattga tggcattttc 003541 ttgtattcat agatccgtat ttcaaactta gatatatgcc tgtgccacat cgcttttaac 003601 tgtgacatct gcagaagaat aactaagacg acctgttcag tacggctaat aactaagacg 003661 acctgttcag tacggttata ttgccagttc attttgccgc ctcgctttcg ctctgccttg 003721 aagcgttgca acttccttat tatcgcaatt aatagagggt gctttagaaa attagaatgt 003781 acgc |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ469914 | baal14d22 | 567 |
| more... (Total Hit Count: 30 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ623410 | rwhvs16n24 | 883 |
| more... (Total Hit Count: 29 ) | ||
