更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK110932 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os09g0327600 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 9 |
| RAP - Location, Length | 10290225 - 10292672 ( - ); 2448(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 10290225 - 10291278 ( - ); 1054 (bp) |
| Exon 2 | Location | 10292302 - 10292672 ( - ); 371 (bp) |
| Related Rice IDs | ||||||||
|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | RAP Annotated Accession No |
KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
| Os09g0327600 | Os09t0327600-01 | 002173F11 | 113786 | 002173F11 | 19970 | LOC_Os09g15840.1 | AK110932 | 18947 |
Chromosome: 9 , position: 10,290,225 - 10,292,672 bp |
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| Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 atatctgcat tggtgtcttc cctccggtca ctcctagctc ccccatccgt tgcagcatgg 000061 ttggcgccga gatgcttgtg gccgcggcgg tgagccaggt cgcccggaag atcaacggca 000121 tcgtcggcgt cgcgcagggc gaggtgaagc tgtgctgcaa tttcagcgac gatttggagg 000181 gcatcaagga taccttggtg tacctggaaa cccttctgaa aaacgccgag aacaactcct 000241 tcggaagcga cagggccaac ctgcgacact ggctcggcca gatcaagtcc ctggcttacg 000301 acatcgaaga tatcgttgat gggtactact cttccaagga gcagttcgat gggggcagct 000361 atgctcagaa ggtaatggat gctcttcgga aagccaatct cttccctttc tttagtccag 000421 aagaattcct tctgcaattt caatttaatt ttcggaatta gccggtgatt ggatctggag 000481 tgtattagta ggggcacgtg gcaccactag aatggcttgt tgcctaactg cgaatcagct 000541 cggaattggg aatttttcct ttcttctttt ttataagctg tataaagaaa gggtctcata 000601 ggttgcccaa aagctgatta taagctgtaa tggtttatta gcgaccaaat aataatttgt 000661 gtaaaatttt tatatatgtg ttctcagcga tttaaaagtc aatgctgaaa aaatatgttg 000721 aaaatatctt atcttaaaaa tcaacttcaa aattaagttt taaaattcaa attttggctt 000781 tggcttattc ttctttgggc aacctatggg gctgaaagaa gcaatatcat cttatctttg 000841 acatccttcg atggtaactg tttggattag cccagtcttt gtagcctaca tcaatctttt 000901 ttgggttgtt ggattaatca ttttgtcagt tccatatatt gcaattttgc aattgcactt 000961 tacacaccaa catcctgcag caacgcacag ggtgtcatct agcgtagctt atataagtca 001021 acacaatcga taattagaag catccttcct tttgttaaga aattatttgg taatagtaag 001081 agataagccg aatacttaca cgtaacttat ctttagactg tacatttgct tgagggggac 001141 tagatagtga gagatgagaa acttgtaggc atgcaaaaaa atgtccttcg tattatatga 001201 gaaaatgcaa ggtttatacc aaagacttgt gtatctatca gctatgtaag ggctggtacc 001261 ttccttggct ccttgatgca ccaactcttg tttagctgtc cccttttttg tcttccagca 001321 acatcgttat caaaatataa aatatatttc atgataaaga ctacttttat gtatatatgt 001381 tggtaaattt acaggggtca ttattctgct cactatcgaa tccaatgctt ctgaaaggta 001441 gcatggttta taagatgaag tccaagaggg agatgttaca gcaaaggcaa caattgccca 001501 atcagtatca tttcctttca catatcaact cagcagtgaa ttttgaggag aagcaaacaa 001561 catcatacag aaatactgac attgcaattg ttgggaggga tgcagactta gataatctca 001621 tggacatttt aatggaaaac agcgctgaag agctttccat tatatccata gttgggcctg 001681 taggttttgg gaagacaagc ctagcacagt tcgttttcaa taatacagga acagaggtat 001741 tcagctttag gatatgggtt catgtttcca tgggtaatat caaccttgaa aaaattggaa 001801 gagatatagt ttcacaaact acagaaaaaa ttgagggaaa tatgcagctg cagtcaatca 001861 agaatgctgt tcagcgtgtg ctaaataaat atagttgctt gatcatatta gatagccttt 001921 ggggaaagga tgaagaagtg aatgaattga agcagatgtt gcttactggt agacatacag 001981 aaagcaagat catagtgacc actcatagca ataaagtagc taagctgatt tccaccgttc 002041 cactgtacaa gctggcagct ttatctgagg atgattgttt aaaaatattc tctcaaaggg 002101 caatgacagg tccgggtgac ccgttgttca gggaatatgg agaagaaatc gttagaaggt 002161 gtgaaggcac acccttggta gccaattttc tcggttctgt ggtgaatgct caacgacaaa 002221 ggcgtgagat ttggcaagct gcaaaggatg aagaaatgtg gaagatagag gaagattatc 002281 cccaagacaa aatttcacca ctatttccat cattcaagat aatatattat aatatgcccc 002341 atgagctaag attatgcttt gtatattgtt caatcttccc taaaggaact gttatagaaa 002401 agaagaaact tattcagcaa tggattgcac ttgacatgat tgagtgtg |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | |||
|---|---|---|---|
| Acc. No. | Clone Name | Length | |
| BJ470207 | baal15o12 | 621 | view details |
